New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4520290 =36 (0.730)4 (0.090) 4/244 NT 9.7% coding (148/267 nt) cspD DNA replication inhibitor
?NC_002947 4520332 = 40 (0.850)coding (190/267 nt) cspD DNA replication inhibitor

TATGGATTCATCAATGAGGAAGGTAAATCCGATGACCTGTTCGCCCATTATTCCGCCATCCAAATGGACGGATACAAGACCCTGAAGGCTGGCCAGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGTTTTCTGTTGC  >  NC_002947/4520185‑4520479
                                                                                                                                                   |                                                                                                                                                   
ttttgtctatcggcacagcgcaggcagtcaggcttttgcggtttcgctttgcggctcgcccaaggctctggcagcctctgccgcagcggccgcggcatctttgatTTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGaaa                                                                                                                                                     >  2:67449‑M1/106‑148 (MQ=255)
tATGGATTCATCAATGAGGAAGGTAAATCCGATGACCTGTTCGCCCATTATTCCGCCATCCAAATGGACGGATACAAGACCCTGAAGGCTGGCCAGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGaaa                                                                                                                                                     >  1:110143/1‑148 (MQ=255)
    gATTCATCAATGAGGAAGGTAAATCCGATGACCTGTTCGCCCATTATTCCGCCATCCAAATGGACGGATACAAGACCCTGAAGGCTGGCCAGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCaaa                                                                                                                                                <  1:73554/149‑1 (MQ=255)
         atcaATGAGGAAGTTAAATCCGATGACCTGTTCGCCCATTATTCCGCCATCCAAATGGACGGATACAAGACCCTGAAGGCTGGCCAGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGc                                                                                                                                           <  5:266267/149‑1 (MQ=255)
            aaTGAGGAAGGTAAATCCGATGACCTGTTCGCCCATTATTCCGCCATCCAAATGGACGGATACAAGACCCTGAAGGCTGGCCAGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCcg                                                                                                                                         <  4:46696/148‑1 (MQ=255)
             cacagcgcaggcagtcaggcttttgcagtttcgctttgcggctcgcccaaggctctggcagcctctgccgcagcggccgcggcatctttgatTTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGcc                                                                                                                                          >  3:93048‑M1/93‑146 (MQ=255)
             cacagcgcaggcagtcaggcttttgcagtttcgctttgcggctcgcccaaggctctggcagcctctgccgcagcggccgcggcatcatttatTTAAAAAAAGTCCAAGGCCCCAAAGGCATGCACGCCGATGAAATAaaagaaacc                                                                                                                                          <  4:93048‑M1/54‑5 (MQ=255)
                                 gACCTGTTCGCCCATTATTCCGCCATCCAAATGGACGGATACAAGACCCTGAAGGCTGGCCAGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGc                                                                                                                   >  7:120935/1‑149 (MQ=255)
                                  aCCTGTTCGCCCATTATTCCGCCATCCAAATGGACGGATACAAGACCCTGAAGGCTGGCCAGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGc                                                                                                                   <  2:159829/148‑1 (MQ=255)
                                  aCCTGTTCGCCCATTATTCCGCCATCCAAATGGACGGATACAAGACCCTGAAGGCTGGCCAGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGc                                                                                                                   <  6:112269/148‑1 (MQ=255)
                                  aCCTGTTCGCCCATTATTCCGCCATCCAAATGGACGGATACAAGACCCTGAAGGCTGGCCAGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGc                                                                                                                   <  5:12817/148‑1 (MQ=255)
                                       ttCGCCCATTATTCCGCCATCCAAATGGACGGATACAAGACCCTGAAGGCTGGCCAGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGc                                                                                                             >  2:50294/1‑149 (MQ=255)
                                            ccATTATTCCGCCATCCAAATGGACGGATACAAGACCCTGAAGGCTGGCCAGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTgg                                                                                                        >  2:71424/1‑149 (MQ=255)
                                             cATTATTCCGCCATCCAAATGGACGGATACAAGACCCTGAAGGCTGGCCAGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTggg                                                                                                       >  7:213269/1‑149 (MQ=255)
                                                 attCCGCCATCCAAATGGACGGATACAAGACCCTGAAGGCTGGCCAGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGa                                                                                                    <  2:110143/148‑1 (MQ=255)
                                                  ttCCGCCATCCAAATGGACGGATACAAGACCCTGAAGGCTGGCCAGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGc                                                                                                  <  1:50294/149‑1 (MQ=255)
                                                     cGCCATCCAAATGGACGGATACAAGACCCTGAAGGCTGGCCAGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCg                                                                                                >  7:81459/1‑148 (MQ=255)
                                                                  gACGGATACAAGACCCTGAAGGCTGGCCAGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGaaa                                                                                      <  7:271246/145‑1 (MQ=255)
                                                                  gACGGATACAAGACCCTGAAGGCTGGCCAGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGaaa                                                                                      >  8:271246/1‑145 (MQ=255)
                                                                       aTACAAGACCCTGAAGGCTGGCCAGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAg                                                                             >  1:17243/1‑149 (MQ=255)
                                                                          cAAGACCCTGAAGGCTGGCCAGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCaaa                                                                                            >  5:61957/1‑131 (MQ=255)
                                                                          cAAGACCCTGAAGGCTGGCCAGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCaaa                                                                                            <  6:61957/131‑1 (MQ=255)
                                                                          cAAGACCCTGAAGGCTGGCCAGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGcc                                                                           <  1:71424/148‑1 (MQ=255)
                                                                           aaGCCCCTGAAGGCTGGCCAGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGCGCCTTGGGCGAGCCGCAACGCGAAACGGCAAAAGccg                                                                          >  7:210910/1‑147 (MQ=255)
                                                                           aaGACCCTGAAGGCTGGCCAGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTg                                                                         >  4:216890/1‑149 (MQ=255)
                                                                             gACCCTGAAGGCTGGCCAGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGAc                                                                       >  2:73306/1‑149 (MQ=255)
                                                                                ccTGAAGGCTGGCCAGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGc                                                                                                  <  5:69877/119‑1 (MQ=255)
                                                                                ccTGAAGGCTGGCCAGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGc                                                                                                  >  6:69877/1‑119 (MQ=255)
                                                                                 cTGAAGGCTGGCCAGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGActgcc                                                                   >  5:284250/1‑149 (MQ=255)
                                                                                           gCCAGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGc                                                         >  6:98023/1‑149 (MQ=255)
                                                                                            ccAGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGcc                                                        >  7:69373/1‑149 (MQ=255)
                                                                                            ccAGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGcc                                                        >  6:266553/1‑149 (MQ=255)
                                                                                             ggtttcttttatttcatcggcgtgcatgcctttggggccttggactttttttaaATAAATGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCtgtg                                                          <  4:93048‑M2/92‑1 (MQ=255)
                                                                                             ggcatctttgatttcaacggcgtgcaagcccttggggccctggacgatgttgaaATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCtgtg                                                          >  3:93048‑M2/55‑146 (MQ=255)
                                                                                              aGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGa                                                      >  3:170822/1‑149 (MQ=255)
                                                                                                gCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATa                                                    <  1:73306/149‑1 (MQ=255)
                                                                                                  cGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGa                                                  >  5:167883/1‑149 (MQ=255)
                                                                                                        tttcaacggcgtgcaagcccttggggccctggacgatgttgaaATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACCGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACaaaa                                             >  2:67449‑M2/44‑148 (MQ=255)
                                                                                                         TTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCTAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACaaaaaa                                           >  8:213269‑M1/1‑149 (MQ=255)
                                                                                                         TTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGAct                                                                      <  1:272085‑M1/122‑1 (MQ=255)
                                                                                                         TTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGAct                                                                      >  2:272085‑M1/1‑122 (MQ=255)
                                                                                                          tcaacggcgtgcaagcccttggggccctggacgatgttgaaATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACCGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACaaaaaa                                           <  1:67449‑M2/107‑1 (MQ=255)
                                                                                                           CAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACaaaaaaa                                          <  2:134450‑M1/148‑1 (MQ=255)
                                                                                                            AACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAAt                                         >  2:249070‑M1/1‑148 (MQ=255)
                                                                                                            AACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATc                                        >  4:170822‑M1/1‑149 (MQ=255)
                                                                                                             ACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCg                                       >  6:284250‑M1/1‑149 (MQ=255)
                                                                                                              CATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCgg                                      <  4:257334‑M1/149‑1 (MQ=255)
                                                                                                              CATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCgg                                      <  7:180660‑M1/149‑1 (MQ=255)
                                                                                                                tCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGcc                                    <  8:69373/149‑1 (MQ=255)
                                                                                                                  gTCCAGGGCCCCAAGGGCGTGCCCGCCGTTGACCTCCAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGCCTGCCTGCGCTGTGCCGCTAGACAAAAAAATCGGcc                                    <  8:210910/147‑1 (MQ=255)
                                                                                                                          ccccAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTaa                          <  4:297893/149‑1 (MQ=255)
                                                                                                                           cccAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTaa                          >  8:153286/1‑148 (MQ=255)
                                                                                                                            ccAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTaa                          >  7:159132/1‑147 (MQ=255)
                                                                                                                             cAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAaag                       <  5:293463/149‑1 (MQ=255)
                                                                                                                                gggCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAaagaag                    <  5:98023/149‑1 (MQ=255)
                                                                                                                                 ggCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGc                   >  4:195391/1‑149 (MQ=255)
                                                                                                                                      gCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCg              >  4:199822/1‑149 (MQ=255)
                                                                                                                                         cGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGtt           <  3:216890/149‑1 (MQ=255)
                                                                                                                                                gaaATCAAAGATGCCGCGGCCGCGGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAATGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGTTTTCTGt     <  6:167883‑M2/145‑1 (MQ=255)
                                                                                                                                                  aATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGTTTTCTGTTGc  <  3:199822‑M2/148‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
TATGGATTCATCAATGAGGAAGGTAAATCCGATGACCTGTTCGCCCATTATTCCGCCATCCAAATGGACGGATACAAGACCCTGAAGGCTGGCCAGGCCGTGGTATTCAACATCGTCCAGGGCCCCAAGGGCTTGCACGCCGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGTTTTCTGTTGC  >  NC_002947/4520185‑4520479

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.