| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4625235 = | 57 (1.150) | 6 (0.130) | 3/242 | NT | 10.4% | intergenic (+3828/+736) | PP_5654/PP_4091 | phosphotriesterase/transposase |
| ? | NC_002947 | 4625280 = | 49 (1.050) | intergenic (+3873/+691) | PP_5654/PP_4091 | phosphotriesterase/transposase | |||||
ATGGACAGCAGATTGTCGGCCGCGTCGTAGCGGTAGTCGGTGGTGCCATCTTCGGTGCGCTTGCTGACAAGCCGGCCGATGGCGTCCCGCTCGAAGTCATGGCGGATGGCAGCCGTCCGTGTCGGCGGGGCATTATCGGACAGGGGCGGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4625387‑4625235‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctgcCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGCTACGACGCGGCCGACAATCTGCTGTCCATCACCTTCACAGACAACCAGGGCAAGAAGCAGCAACTC > NC_002947/4625280‑4625424 ATGGACAGCAGATTGTCGGCCGCGTCGTAGCGGTAGTCGGTGGTGCCATCTTCGGTGCGCTTGCTGACAAGCCGGCCGATGGCGTCCCGCTCGAAGTCATGGCGGATGGCAGCCGTCCGTGTCGGCGGGGCATTATCGGACAGGGGCGG < 4:249799/149‑1 GGCAGTCGTCCGTGTCGGCGGGGCGTTGTCGGACAGGGGCGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGCTACGACGCGGCCGACAATCTGCTG > 5:185525/1‑149 CAGCCGTCCGTGTCGGCGGGGCGTTGTCGGACAGCGGCGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAGGATGGCACCACCGACTACCGCTACGACGCCGCCGACAATCTGCTGTC > 6:146623/1‑149 CAGCCGTCCGTGTCGGCGGGGCATTATCGGTCAGGGGCGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGCTACGACGCGG < 1:193072/133‑1 CAGCCGTCCGTGTCGGCGGGGCATTATCGGGCAGGGGCGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGCTACGACGCGG > 2:193072/1‑133 CCGTCCGTGTCGGCGGGGCATTATCGGACAGGGGCGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGCTACGACGCGGCCGACAATCTGCTGTCCAT > 7:52356/1‑149 GTGTCGGCGGGGCGTTGTCGGACAGGGGCGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGCTACGACGCGGCCGACAATCTGCTGTCCATCACCTT < 6:185525/149‑1 CTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGCTACGACGCGGCCGACAATCTGCTGTCCATCACCTTCACAGACAACCAGGGCAAGAAGCAGCAACTC < 7:60535/149‑1 ATGGACAGCAGATTGTCGGCCGCGTCGTAGCGGTAGTCGGTGGTGCCATCTTCGGTGCGCTTGCTGACAAGCCGGCCGATGGCGTCCCGCTCGAAGTCATGGCGGATGGCAGCCGTCCGTGTCGGCGGGGCATTATCGGACAGGGGCGGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4625387‑4625235‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctgcCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGCTACGACGCGGCCGACAATCTGCTGTCCATCACCTTCACAGACAACCAGGGCAAGAAGCAGCAACTC > NC_002947/4625280‑4625424 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |