| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4625235 = | 57 (1.150) | 6 (0.130) | 3/242 | NT | 10.4% | intergenic (+3828/+736) | PP_5654/PP_4091 | phosphotriesterase/transposase |
| ? | NC_002947 | 4625280 = | 49 (1.050) | intergenic (+3873/+691) | PP_5654/PP_4091 | phosphotriesterase/transposase | |||||
ACCGGCTGGTGGCACAAAAAGACCTGGATAGCAGTGGCCGCCTCTATGCCTACAACGTGCTGGATGAGGTCATTCGTCTTACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGCTACGACGCGGCCGACAATCTGCTGTCCATCACCTTCACAGACAACCAGGGCAAGAAGCAGCAACTC > NC_002947/4625132‑4625424 | cagcagattgtcggccgcgtcgtagcggtagtcggtggtgccatcttcggtgcgcttgctgacaagccggccgatggcgtcccgctcgaagtcatggcggatgGCAGCCGCCCCTGTCCGACAACGCCCCGCCGACACGGACGACTGcc > 5:185525‑M1/104‑149 (MQ=255) gCTGGTGGCACAAAAAGACCTGGATAGCAGTGGCCGCCTCTATGCCTACAACGTGCTGGATGAGGTCATTCGTCTTACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATcc < 4:171286/149‑1 (MQ=39) tggCACAAAAAGACCTGGATAGCAGTGGCCGCCTCTATGCCTACAACGTGCTGGATGAGGTCATTCGTCTTACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCAt < 7:106892/149‑1 (MQ=39) tggCACAAAAAGACCTGGATAGCAGGGGCCGCCTCTATGCCTACAACGTGCTGGATGAGGTCATTCGTCTTACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCAt < 8:78116/149‑1 (MQ=255) gggCACAAAAAGACCTGGATAGCAGTGGCCGCCTCTATGCCTACAACGTGCTGGATGAGGTCATTCGTCTTACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCAt < 7:113974/148‑1 (MQ=39) gCACAAAAAGACCTGGATAGCAGTGGCCGCCTCTATGCCTACAACGTGCTGGATGAGGTCATTCGTCTTACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGa > 3:57178/1‑149 (MQ=39) aaaaaGACCTGGATAGCAGTGGCCGCCTCTATGCCTACAACGTGCTGGATGAGGGCATTCGTCTTACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTc > 1:241250/1‑149 (MQ=255) gACCTGGATAGCAGTGGCCGCCTCTATGCCTACAACGTGCTGGATGAGGTCATTCGTCTTACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCg < 2:159776/149‑1 (MQ=39) ccTGGATAGCAGTGGCCGCCTCTATGCCTACAACGTGCTGGATGAGGTCATTCGTCTTACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCggg < 5:279407/149‑1 (MQ=39) cTGGATAGCAGTGGCCGCCTCTATGCCTACAACGTGCTGGATGAGGTCATTCGTCTTACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGa > 7:120683/1‑149 (MQ=39) tGGATAGCAGTGGCCGCCTCTATGCCTACAACGTGCTGGATGAGGTCATTCGTCTTACCCATGTGCCCTCGCCTGACGAGCAGCCGCGCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATcc < 3:259767/129‑1 (MQ=255) gccgccTCTATGCCTACAACGTGCTGGATGAGGTCATTCGTCTTACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATcggccg < 4:57178/148‑1 (MQ=37) gccTCTATGCCTACAACGTGCTGGATGAGGTCATTCGTCTTACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCtt < 2:241250/149‑1 (MQ=37) ctATGCCTACAACGTGCTGGATGAGGTCATTCGTCTTACCCATGTGCCATCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGt > 7:200535/1‑147 (MQ=37) tGCCTACAACGTGCTGGATGAGGTCATTCGTCTTACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCa < 8:200535/146‑1 (MQ=37) gCCTACAACGTGCTGGATGAGGTCATTCGTCTTACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATcggccggc > 7:13533/1‑139 (MQ=37) gCCTACAACGTGCTGGATGAGGTCATTCGTCTTACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATcggccggc < 8:13533/139‑1 (MQ=37) ccTACAACGTGCTGGATGAGGTCATTCGTCTTACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAg > 5:56907/1‑149 (MQ=37) cTACAACGTGCTGGATGAGGTCATTCGTCTTACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCtt > 1:45241/1‑139 (MQ=37) cTACAACGTGCTGGATGAGGTCATTCGTCTTACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCtt < 2:45241/139‑1 (MQ=37) cTACAACGTGCTGGATGAGGTCATTCGTCTTACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAgc < 3:305680/149‑1 (MQ=37) cTACAACGTGCTGGATGAGGTCATTCGTCTTACCCATGTGCCCTCGCCTAACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAgc > 1:234062/1‑149 (MQ=37) aaCGTGCTGGATGAGGTCATTCGTCTTACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCAc > 3:98026/1‑149 (MQ=37) cTGGATGAGGTCATTCGTCTTACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGa < 8:120683/149‑1 (MQ=37) gATGAGGTCATTCGTCTTACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCAt < 4:64036/96‑1 (MQ=40) gATGAGGTCATTCGTCTTACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCAt > 3:64036/1‑96 (MQ=40) gATGAGGTCATTCGTCTTACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAgcg < 5:105246/137‑1 (MQ=37) gATGAGGTCATTCGTCTTACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAgcg > 6:105246/1‑137 (MQ=37) gATGAGGTCATTCGTCTTACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATgg > 5:297223/1‑149 (MQ=37) aTGAGCGCATTCGTCTTACCCCTGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATTATTCCCCGCCGACACGGACGGCTGCATTCCGCCATGACTTCGAGCGGTACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGc < 4:36015/149‑1 (MQ=11) gTCATTCGTCTTACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCAGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGcaccac < 8:141737/149‑1 (MQ=37) tCGTCTTACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGAc > 7:228893/1‑148 (MQ=37) ttACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCa > 4:168742/1‑123 (MQ=38) ttACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCa < 3:168742/123‑1 (MQ=38) ttACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGc > 3:1885/1‑149 (MQ=37) ccATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGCTacg > 3:183050/1‑149 (MQ=37) tgCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGCTACGAcgcg < 6:297223/149‑1 (MQ=37) gCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGCTACGACGCgg > 8:60535/1‑149 (MQ=37) gCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGCTACGACGCGGCCGa < 8:228893/147‑1 (MQ=37) gCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGCTACGACGCGGCCGAc > 3:11633/1‑148 (MQ=37) gAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGCTACGACGCGGCCGACAATctgct < 4:11633/149‑1 (MQ=37) ggcagtcgtccgtgtcggcggggcgttgtcggacaggggcggctgcCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGCTACGACGCGGCCGACAATctgctg > 5:185525‑M2/47‑149 (MQ=255) cagccgtccgtgtcggcggggcgttgtcggacagcggcggctgcCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAGGATGGCACCACCGACTACCGCTACGACGCCGCCGACAATCTGCTGTc > 6:146623‑M2/45‑149 (MQ=255) cagccgtccgtgtcggcggggcattatcggtcaggggcggctgcCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGCTACGACGCgg < 1:193072‑M2/89‑1 (MQ=255) cagccgtccgtgtcggcggggcattatcgggcaggggcggctgcCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGCTACGACGCgg > 2:193072‑M2/45‑133 (MQ=255) ccgtccgtgtcggcggggcattatcggacaggggcggctgcCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGCTACGACGCGGCCGACAATCTGCTGTCCAt > 7:52356‑M2/42‑149 (MQ=255) CCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGCTACGACGCGGCCGACAATCTGCTGTCCAt < 4:249799‑M1/149‑1 (MQ=255) ccccTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGCTACGACGCGGCCGACAATctgct > 2:176489/1‑140 (MQ=37) ccccTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGCTACGACGCGGCCGACAATCTGCTGTCCATCAc < 2:234062/149‑1 (MQ=37) ccccTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACAACCGCTACGACGCGGCCGACAATctgct < 1:176489/140‑1 (MQ=37) gtgtcggcggggcgttgtcggacaggggcggctgcCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGCTACGACGCGGCCGACAATCTGCTGTCCATCACCtt < 6:185525‑M2/114‑1 (MQ=255) gTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGCTACGACGCGGCCGa > 2:143090/1‑126 (MQ=38) gTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGCTACGACGCGGCCGa < 1:143090/126‑1 (MQ=38) cGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGCTACGACGCGGCCGACAATCTGCTGTCCATCACCTTca > 7:64764/1‑146 (MQ=37) aTAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGCTACGACGCGGCCGACAATCTGCTGTCCATCACCTTCACAGAc < 4:98026/149‑1 (MQ=35) aTGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGCTACGACGCGGCCGACAATCTGCTGTCCATCACCTTCACAGACAAc < 3:249799/149‑1 (MQ=34) cccGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGAc > 7:39727/1‑94 (MQ=33) cccGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGAc < 8:39727/94‑1 (MQ=33) acacGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGCTACGACGCGGCCGAGAATCTGCTGTCCATCACCTTCACAGACAACCAGGGCaag > 5:272728/1‑147 (MQ=255) ctgcCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGCTACGACGCGGCCGACAATCTGCTGTCCATCACCTTCACAGACAACCAGGGCAAGAAGCAGCAACTc < 7:60535‑M2/145‑1 (MQ=255) | ACCGGCTGGTGGCACAAAAAGACCTGGATAGCAGTGGCCGCCTCTATGCCTACAACGTGCTGGATGAGGTCATTCGTCTTACCCATGTGCCCTCGCCTGACGAGCAGCCGCCCCTGTCCGATAATGCCCCGCCGACACGGACGGCTGCCATCCGCCATGACTTCGAGCGGGACGCCATCGGCCGGCTTGTCAGCAAGCGCACCGAAGATGGCACCACCGACTACCGCTACGACGCGGCCGACAATCTGCTGTCCATCACCTTCACAGACAACCAGGGCAAGAAGCAGCAACTC > NC_002947/4625132‑4625424 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |