New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4648496 | 28 (0.570) | 6 (0.130) | 4/242 | NT | 16.8% | coding (643/1461 nt) | PP_4112 | sulfate transporter |
? | NC_002947 | = 4648526 | 33 (0.710) | coding (613/1461 nt) | PP_4112 | sulfate transporter |
CCAATGCCACACACTCGCGGTCCGGGAAGCCACGGCTCTCGGTGATTTCGTCGGTCAGGTTGAGGGTGAGCAGGGTTTCCAGCAGGCCGACCATGGCCATCAGCACCGCGTAGGGGGCGATGATCTTCAGGGTTTCCAGATTCCAAGGCACAT‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4648343‑4648496 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcacat‑cGCCGGTGGCCTGCCGGGGCTGGCGCTGCCGGATGTGCCTTGGAATCTGGAAACCCTGAAGATCATCGCCCCCTACGCGGTGCTGATGGCCATGGTCGGCCTGCTGGAAACCC < NC_002947/4648526‑4648415 CCAATGCCACACACTCGCGGTCCGGGAAGCCACGGCTCTCGGTGATTTCGTCGGTCAGGTTGAGGGTGAGCAGGGTTTCCAGCAGGCCGACCATGGCCATCAGCACCGCGTAGGGGGCGATGATCTTCAGGGTTTCCAGATTCCAAGGC < 2:285092/149‑1 AATGCCACACACTCGCGGTCCGGGAAGCCACGGCTCTCGGTGATTTCGTCGGTCAGGTTGAGGGTGAGCAGGGTTTCCAGCAGGCCGACCATGGCCATCAGCACCGCGTAGGGGGCGATGATCTTCAGGGTTTCCAGATTCCAAGGCA > 1:181426/1‑148 TTTCGTCGGTCAGGTTGAGGGTGAGCAGGGTTTCCAGCAGGCCGACCATGGCCATCAGCACCGCGTAGGGGGCGATGATCTTCAGGGTTTCCAGATTCCAAGGCACAT‑CGCCGGTGGCCTGCCGGGGCTGGCGCTGCCGGATGTGCCTT < 5:280648/149‑1 TTTCGTCGGGCAGGTTGAGGGTGATCAGTGTTTCCATCAGGCCGACCATGTCCATCAGCACCGCGTAGGGGGCGATGATCTTCAGGGTTTCCAGATTCCAAGGCACAT‑CGCCGGTGGCCTGCCGGGGCTGGCGCTGCCGGATGTGCCTT < 6:105525/149‑1 GGGTGAGCAGGGTTTCCAGCAGGCCGACCATGGCCATCAGCACCGCGTAGGGGGCGATGATCTTCAGGGTTTCCAGATTCCAAGGCACAT‑CGCCGGTGGCCTGCCGGGGCTGGCGCTGCCGGATGTGCCTTGGAATCTG > 5:235668/1‑139 GGGTGAGCAGGGTTTCCAGCAGGCCGACCATGGCCATCAGCACCGCGTAGGGGGCGATGATCTTCAGGGTTTCCAGATTCCAAGGCACAT‑CGCCGGTGGCCTGCCGGGGCTGGCGCTGCCGGATGTGCCTTGGAATCTG < 6:235668/139‑1 CAGATTCCAAGGCACATCCGGCAG‑CGCCAGCCCCGGCAGGCGCTGCCGGATGTGCCTTGGAATCTGGAAACCCTGAAGATCATCGCCCCCTACGCGGTGCTGATGGCCATGGTCGGCCTGCTGGAAACCC < 7:15121/130‑1 CAGATTCCAAGGCACATCCGGCAG‑CGCCAGCCCCGGCAGGCGCTGCCGGATGTGCCTTGGAATCTGGAAACCCTGAAGATCATCGCCCCCTACGCGGTGCTGATGGCCATGGTCGGCCTGCTGGAAACCC > 8:15121/1‑130 CCAATGCCACACACTCGCGGTCCGGGAAGCCACGGCTCTCGGTGATTTCGTCGGTCAGGTTGAGGGTGAGCAGGGTTTCCAGCAGGCCGACCATGGCCATCAGCACCGCGTAGGGGGCGATGATCTTCAGGGTTTCCAGATTCCAAGGCACAT‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4648343‑4648496 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcacat‑cGCCGGTGGCCTGCCGGGGCTGGCGCTGCCGGATGTGCCTTGGAATCTGGAAACCCTGAAGATCATCGCCCCCTACGCGGTGCTGATGGCCATGGTCGGCCTGCTGGAAACCC < NC_002947/4648526‑4648415 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |