New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4648496	28 (0.570)	6 (0.130)	4/242	NT	16.8%	coding (643/1461 nt)	PP_4112	sulfate transporter
	?	NC_002947	= 4648526	33 (0.710)					coding (613/1461 nt)	PP_4112	sulfate transporter

ATTTCGTCGGTCAGGTTGAGGGTGAGCAGGGTTTCCAGCAGGCCGACCATGGCCATCAGCACCGCGTAGGGGGCGATGATCTTCAGGGTTTCCAGATTCCAAGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAGGCAGCCCGAGCACGTACACCACCAGGCCAACACCGAGGATCGCCACCAAGGCCGGCGGCACCGCGCGGGTCAGTTTCGGCAGCACATAAACCACCGCCATGGTCAGCGCCACCAG  >  NC_002947/4648387‑4648673                                                                                                                                            |                                                                                                                                                      aTTTCGTCGGTCAGGTTGAGGGTGAGCAGGGTTTCCAGCAGGCCGACCATGGCCATCAGCACCGCGTAGGGGGCGATGATCTTCAGGGTTTCCAGATTCCAAGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTgcgc                                                                                                                                              <  1:244999/149‑1 (MQ=255)                     ggTGAGCAGGGTTTCCAGCAGGCCGACCATGGCCATCAGCACCGCGTAGGGGGCGATGATCTTCAGGGTTTCCAGATTCCAAGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑ggg                                                                                                                        <  2:181426/149‑1 (MQ=255)                     ggTGAGCAGGGTTTCCAGCAGGCCGACCATGGCCATCAGCACCGCGTAGGGGGCGATGATCTTCAGGGTTTCCAGATTCCAAGGCACAACCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑ggg                                                                                                                        >  4:17715/1‑149 (MQ=255)                     ggTGAGCAGGGTGTCCAGCAGGCCGACCATGGCCATCAGCACCGCGTAGGGGGCGATGATCTTCAGGGTTTCCAGATTCCAAGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑ggg                                                                                                                        <  4:122724/149‑1 (MQ=255)                        gAGCAGGGTTTCCAGCAGGCCGACCATGGCCATCAGCACCGCGTAGGGGGCGATGATCTTCAGGGTTTCCAGATTCCAAGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAg                                                                                                                     <  7:210021/149‑1 (MQ=255)                           cAGGGTTTCCAGCAGGCCGACCATGGCCATCAGCACCGCGTAGGGGGCGATGATCTTCAGGGTTTCCAGATTCCAAGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAgg                                                                                                                    >  4:171373/1‑147 (MQ=255)                             gggTTTCCAGCAGGCCGACCATGGCCATCAGCACCGCGTAGGGGGCGATGATCTTCAGGGTTTCCAGATTCCAAGGCACATCCGGCAGCGCCTGCCGGGGCTGGCG‑CTGCCggatgtgccttggaatctg                                                                                                                                    <  7:15121‑M2/130‑20 (MQ=255)                             gggTTTCCAGCAGGCCGACCATGGCCATCAGCACCGCGTAGGGGGCGATGATCTTCAGGGTTTCCAGATTCCAAGGCACATCCGGCAGCGCCTGCCGGGGCTGGCG‑CTGCCggatgtgccttggaatctg                                                                                                                                    >  8:15121‑M2/1‑111 (MQ=255)                                    cagcagGCCGACCATGGCCATCAGCACCGCGTAGGGGGCGATGATCTTCAGGGTTTCCAGATTCCAAGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAGGCAGCCCGAGCa                                                                                                         >  7:160895/1‑149 (MQ=255)                                     agcagGCCGACCATGGCCATCAGCACCGCGTAGGGGGCGATGATCTTCAGGGTTTCCAGATTCCAAGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAGGCAGCCCGAGCAc                                                                                                        <  8:160895/149‑1 (MQ=255)                                          gCCGACCATGGCCATCAGCACCGCGTAGGGGGCGATGAGCTTCAGGGTTTCCAGATTCCAAGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAGGCAGCCCGAGCACGTaca                                                                                                   >  6:255783/1‑149 (MQ=255)                                            cGACCATGGCCATCAGCACCGCGTAGGGGGCGATGATCTTCAGGGTTTCCAGATTCCAAGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAgg                                                                                                                    <  3:106377/130‑1 (MQ=255)                                            cGACCATGGCCATCAGCACCGCGTAGGGGGCGATGATCTTCAGGGTTTCCAGATTCCAAGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAgg                                                                                                                    >  4:106377/1‑130 (MQ=255)                                                 aTGGCCATCAGCACCGCGTAGGGGGCGATGATCTTCAGGGTTTCCAGATTCCAAGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGt                                                                                                                       >  6:316399/1‑122 (MQ=255)                                                 aTGGCCATCAGCACCGCGTAGGGGGCGATGATCTTCAGGGTTTCCAGATTCCAAGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGt                                                                                                                       <  5:316399/122‑1 (MQ=255)                                                            cACCGCGTAGGGGGCGATGATCTTCAGGGTTTCCAGATTCCAAGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAGGCAGCCCGAGCACGTACACCACCAGGCCAacac                                                                                    <  4:238414/146‑1 (MQ=255)                                                            cACCGCGTAGGGGGCGATGATCTTCAGGGTTTCCAGATTCCAAGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAGGCAGCCCGAGCACGTACACCACCAGGCCAacac                                                                                    >  3:238414/1‑146 (MQ=255)                                                                 cgTAGGGGGGGATGATCTTCAGGGTTTCCAGATTCCAAGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGGCATGTCGCCCAGGGTGC‑‑GGGTAGGCAGCCCGAGCACGTACACCACCAGGCCAACACCGAGGATc                                                                            <  8:51973/149‑1 (MQ=255)                                                                          cGATGATCTTCAGGGTTTCCAGATTCCAAGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAGGCAGCCCGAGAACGTACACCACCAAGCCAACACCGAGGATCGccacacag                                                                   >  5:86398/1‑145 (MQ=255)                                                                                 cTTCAGGGTTTCCAGATTCCAAGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAGGCAGCCCGAGCACGTACACCACCAGGCCAACACCGAGGATCGCCACCAAGGCcggcg                                                            >  7:186687/1‑149 (MQ=255)                                                                                    cAGGGTTTCCAGATTCCAAGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAGGCAGCCCGAGCACGTACACCACCAGGCCAACACCGAGGATCGCCACCAAGGCcggc                                                             <  3:17715/145‑1 (MQ=255)                                                                                             cAGATTCCAAGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCgatgtgccttggaatctggaaaccctgaagatcatcgccccctacgcggtgctgatggccatggtcggcctgctggaaaccctgctcaccc                                                            >  5:235668‑M2/1‑48 (MQ=255)                                                                                             cAGATTCCAAGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCgatgtgccttggaatctggaaaccctgaagatcatcgccccctacgcggtgctgatggccatggtcggcctgctggaaaccctgctcaccc                                                            <  6:235668‑M2/139‑92 (MQ=255)                                                                                             cAGATTCCAAGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCTTGTCGCCCAGGGTGC‑‑GGGTAGGCAGCCCGAGCACGTACACCACCAGGCCAACACCGAGGATCGCCACCAAGGCCGGCGGCACcgcg                                                    <  6:9338/145‑1 (MQ=255)                                                                                             cAGATTCCAAGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAGGCAGCCCGAGCACGTACACCACCAGGCCAACACCGAGGATCGCCACCAAGGCCGGCGGCACcgcg                                                    >  5:9338/1‑145 (MQ=255)                                                                                             cAGATTCCAAGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAGGCAGCCCGAGCACGTACACCACCAGGCCAACACCGAGGATCGCCACCAAGGCCGGCGGCACCGCGCgg                                                 >  1:289775/1‑148 (MQ=255)                                                                                             cAGATTCCAAGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAGGCAGCCCGAGCACGTACACCACCAGGCCAACACCGAGGATCGCCACCAAGGCCGGCGGCACCGCGCgg                                                 <  2:289775/148‑1 (MQ=255)                                                                                              aGATTCCAAGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAGGCAGCCCGAGCACGTACACCACCAGGCCAACACCGAGGATCGCCACCAAGGCCGGCGGCACCGCGCGGGt                                               >  7:48601/1‑149 (MQ=255)                                                                                               gATTCCAAGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAGGCAGCCCGAGCACGTACACCACCAGGCCAACACCGAGGATCGCCACCAAGGCCGGCGGCACCGCGCGGGt                                               >  7:162996/1‑148 (MQ=255)                                                                                                aTTCCAAGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAGGCAGCCCGAGCACGTACACCACCAGGCCAACACCGAGGATCGCCACCAAGGCCGGCGGCACCGCGCGGGTCa                                             <  5:255783/149‑1 (MQ=255)                                                                                                     aaGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCgatgtgccttggaatctggaaaccctgaagatcatcgccccctacgcggtgctgatggccatggtcggcctgctggaaaccctgctcaccctcaacctgaccgacgaaa                                          <  5:280648‑M2/149‑110 (MQ=255)                                                                                                     aaGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCgatgtgccttggaatctggaaaccctgaagatcatcgccccctacgcggtgctgatggacatggtcggcctgatggaaacactgatcaccctcaacctgcccgacgaaa                                          <  6:105525‑M2/149‑110 (MQ=255)                                                                                                     aaGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAGGCAGCCCGAGCACGTACACCACCAGTCCAACACCGAGGATCGCCACCAAGGCCGGCGGCACCGCGCGGGTCAGTTTc                                        <  3:276725/149‑1 (MQ=255)                                                                                                     aaGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAGGCAGCCCGAGCACGTACACCACCAGGCCAACACCGAGGATCGCCACCAAGGCCGGCGGCACCGCGCGGGTCAGTTTc                                        <  8:162996/149‑1 (MQ=255)                                                                                                          acaTCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAGGCAGCCCGAGCACGTACACCACCAGGCCAACACCGAGGATCGCCACCAAGGCCGGCGGCACCGCGCGGGTCAGTTTCGgcag                                   >  3:252028/1‑149 (MQ=255)                                                                                                            aTCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGCGAGGGTAGGCAGCCCGAGCACGTACACCACCAGGCCAACACCGAGGATCGCCACCAAGGCCGGCGGCACCGCGCGGGTCAGTTTCGgcag                                   >  1:249149/1‑149 (MQ=255)                                                                                                                ggCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAGGCAGCCCGAGCACGTACACCACCAGGCCAACACCGAGGATCGCCACCAAGGCCGGCGGCACCGCGCGGGTCAGTTTCGGCAGCACATa                             <  8:186687/149‑1 (MQ=255)                                                                                                                   aGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAGGCAGCCCGAGCACGTACACCACCAGGCCAACACCGAGGATCGCCACCAAGGCCGGCGGCACCGCGCGGGTCAGTTTCGGCAGCACATAAac                          >  4:108586/1‑149 (MQ=255)                                                                                                                         aGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAGGCAGCCCGAGCACGTACACCACCAGGCCAACACCGAGGATCGCCACCAAGGCCGGCGGCACCGCGCGGGTCAGTTTCGGCAGCACATAAACCACCGc                    >  7:54555/1‑149 (MQ=255)                                                                                                                                      cACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAGGCAGCCCGAGCACGTACACCACCAGGCCAACACCGAGGATCGCCACCAAGGCCGGCGGCACCGCGCGGGTCAGTTTCGGCAGCACATAAACCACCGCCATGGTCAGCGcc       >  5:266460/1‑149 (MQ=255)                                                                                                                                         cGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAGGCAGCCCGAGCACGTACACCACCAGGCCAACACCGAGGATCGCCACCAAGGCCGGCGGCACCGCGCGGGTCa                                             >  7:87538/1‑108 (MQ=255)                                                                                                                                         cGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAGGCAGCCCGAGCACGTACACCACCAGGCCAACACCGAGGATCGCCACCAAGGCCGGCGGCACCGCGCGGGTCa                                             <  8:87538/108‑1 (MQ=255)                                                                                                                                         cGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAGGCAGCCCGAGCACGTACACCACCAGGCCAACACCGAGGATCGCCACCAAGGCCGGCGGCACCGCGCGGGTCAGTTTCGGCAGCACATAAACCACCGCCATGGTCAGCGccac     >  2:210258/1‑148 (MQ=255)                                                                                                                                          ggCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAGGCAGCCCGAGCACGTACACCACCAGGCCAACACCGAGGATCGCCACCAAGGCCGGCGGCACCGCGCGGGTCAGTTTCGGCAGCACATAAACCACCGCCATGGTCAGCGccacca   <  3:171373/149‑1 (MQ=255)                                                                                                                                           gCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAGGCAGCCCGAGCACGTACACCACCAGGCCAACACCGAGGATCGCCACCAAGGCCGGCGGCACCGCGCGGGTCAGTTTCGGCAGCACATAAACCACCGCCATGGTCAGCGCCACCAg  <  3:108586/149‑1 (MQ=255)                                                                                                                                            |                                                                                                                                                      ATTTCGTCGGTCAGGTTGAGGGTGAGCAGGGTTTCCAGCAGGCCGACCATGGCCATCAGCACCGCGTAGGGGGCGATGATCTTCAGGGTTTCCAGATTCCAAGGCACATCCGGCAGCGCCAGCCCCGGCAGGCCACCGGCGATGTGCGCCATGTCGCCCAGGGTGC‑‑GGGTAGGCAGCCCGAGCACGTACACCACCAGGCCAACACCGAGGATCGCCACCAAGGCCGGCGGCACCGCGCGGGTCAGTTTCGGCAGCACATAAACCACCGCCATGGTCAGCGCCACCAG  >  NC_002947/4648387‑4648673

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.