New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4765379 = | 44 (0.890) | 4 (0.090) | 4/240 | NT | 8.0% | coding (32/2439 nt) | fpvA | TonB‑dependent outer membrane ferripyoverdine receptor FpvA |
? | NC_002947 | 4765420 = | 51 (1.100) | coding (73/2439 nt) | fpvA | TonB‑dependent outer membrane ferripyoverdine receptor FpvA |
TTCGATTGCGAGCCGAAGGCCAACAAGGCGCTGGCCAGCGGCTGGGCCGGCACGTTGAACTGGACCTGTTGGGCCTGGGCGATCGCCGGCAGGCCCGCCAGGCCGACGGCCATTGGCGCTGCAAGGCGCAACGAGCGGCGAATGACCAGCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4765532‑4765379 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgccaATGGCCGTCGGCCTGGCGGGCCTGCCGGCGATCGCCCAGGCCCAACAGGTCCAGTTCAACGTGCCGGCCCAGCCGCTGGCCAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAG > NC_002947/4765420‑4765567 TTCGATTGCGAGCCGAAGGCCAACAAGGCGCTGGCCAGCGGCTGGGCCGGCACGTTGAACTGGACCTGTTGGGCCTGGGCGATCGCCGGCAGGCCCGCCAGGCCGACGGCCATTGGCGCTGCAAGGCGCAACGAGCGGCGAATGACCAG < 8:242698/149‑1 GACGGCCATTGGCGCTGCAAGGCGCAACGAGCGGCGAATGACCAGCGCCAATGGCCGTCGGCCTGGCGGGCCTGCCGGCGATC > 1:305985/1‑83 CCATTGGCGCTGCAAGGCGCAACGAGCGGCGAATGACCAGCGCCAATGGCCGTCGGCCTGGCGGGCCTGCCGGCGATCGCCCAGGCCCAACAGGTCCAGTTCAACGTGCCGGCCCAGCCGCTGGCCAGCGCCTTGTTGGCCTTCGGCTC > 3:188974/1‑149 CATTGGCGCTGCAAGGCGCAACGAGCGGCGAATGACCAGCGCCAATGGCCGTCGGCCTGGCGGGCCTGCCGGCGATCGCCCAGGCCCAACAGGTCCAGTTCAACGTGCCGGCCCAGCCGCTGGCCAGCGCCTTGTTGGCCTTCGGCTCG > 8:42802/1‑149 GCGCTGCAAGGCGCAACGAGCGGCGAATGACCAGCGCCAATGGCCGTCGGCCTGGCGGGCCTGCCGGCGATCGCCCAGGCCCAACAGGTCCAGTTCAACGTGCCGGCCCAGCCGCTGGCCAGCGCCTTGTTGGCCTTCGGCTCGCAATC < 4:188974/149‑1 tAGCGCCAATGGCCGTCGGCCTGGCGGGCCTGCCGGCGATCGCCCAGGCCCAACAGGTCCAGTTCAACGTGGCGGCCCAGCCGCTGGCCAGCGCCTTGTTGGCCTTCGGCTCGCAATCGTACCTGCAGGTGCTCTATAGCCCACAGGAC < 8:199146/148‑1 CCAATGGCCGTCGGCCTGGCGGGCCTGCCGGCGATCGCCCAGGCCCAACAGGTCCAGTTCAACGTGCCGGCCCAGCCGCTGGCCAGCGCCTTGTTGGCCTTAGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGG > 4:118513/1‑148 AATGGCCGTCGGCCTGGCGGGCCTGCCGGCGATCGCCCAGGCCCAACAGGTCCAGTTCAACGTGCCGGCCCAGCCGCTGGCCAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAG < 2:175619/149‑1 TTCGATTGCGAGCCGAAGGCCAACAAGGCGCTGGCCAGCGGCTGGGCCGGCACGTTGAACTGGACCTGTTGGGCCTGGGCGATCGCCGGCAGGCCCGCCAGGCCGACGGCCATTGGCGCTGCAAGGCGCAACGAGCGGCGAATGACCAGCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4765532‑4765379 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgccaATGGCCGTCGGCCTGGCGGGCCTGCCGGCGATCGCCCAGGCCCAACAGGTCCAGTTCAACGTGCCGGCCCAGCCGCTGGCCAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAG > NC_002947/4765420‑4765567 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |