New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4891009 =	54 (1.090)	3 (0.060)	3/242	NT	5.9%	coding (171/1275 nt)	ttuD	hydroxypyruvate reductase
	?	NC_002947	4891070 =	44 (0.940)					coding (232/1275 nt)	ttuD	hydroxypyruvate reductase

TCTTCTGGCAGTTGGCGCCGTGGCCGTAACGGGTCACGACCAGGCCGGAGACTTCACCCTGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4891073‑4891009 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgccagAAGATCGAGGTGGTCGAAGCCGCCCACCCGGTCCCGGACGCTGCCGGCCTGGCTGTGGCCAAGCGCGTGCTGGAACTGGTCAGCAACCTCAACGAAGAAGACCGCGTCATCTTCCTGCTGTCTGGCGGTGGCTCGGCGTTGCTGGC  >  NC_002947/4891070‑4891215                                                                                                                                                                                                                     TCTTCTGGCAGTTGGCGCCGTGGCCGTAACGGGTCACGACCAGGCCGGAGACTTCACCCTGCCAGAAGATCGAGGTGGTCGAAGCCGCCCACCCGGTCCCGGACGCTGCCGGCCTGGCTGTGGCCAAGCGCGTGCTGGAACTGGTCAG                                                                 >  7:27410/1‑148   TTCTGGCAGTTGGCGCCGTGGCCGTAACGGGTCACGACCAGGCCGGAGACTTCACCCTGCCAGAAGATCGAGGTGGTCGAAGCCGCCCACCCGGTCCCGGACGCTGCCGGCCTGGCTGTGGCCAAGCGCGTGCTGGAACTGGTCAGCAA                                                              >  5:173768/1‑149                         CGTAACGGGTCACGACCAGGCCGGAGACTTCACCCTGCCAGAAGATCGAGGTGGTCGAAGCCGCCCACCCGGTCCCGGACGCTGCCGGCCTGGCTGTGGCCAAGCGCGTGCTGGAACTGGTCAGCAACCTCAACGAAGAAGACCGCGTC                                        <  8:27410/149‑1                                                              CCAGAAGATCGAGGTGGTCGAAGCCGCCCACCCGGTCCCGGACGCTGCCGGCCTGGCTGTGGCCAAGCGCGTGCTGGAACTGGTCAGCAACCTCAACGAAGAAGACCGCGTCATCTTCCTGCTGTCTGGCGGTGGCTCGGCGaacaaag   >  1:113467/1‑142                                                              CCAGAAGATCGAGGTGGTCGAAGCCGCCCAACCGGTCCCGGACGCTGCCGGCCTGGCTGTGGCCAAGCGCGTGCTGGAACTGGTCAGCACCCTCAACGAAGCAGACCGCGTCATCTTCCTGCTGTCTGGCGGTGGCTAGGCGTgtctgt   >  7:294676/1‑143                                                               CAGAAGATCGAGGTGGTCGAAGCCGCCCACCCGGTCCCGGACGCTGCCGGCCTGGCTGTGGCCAAGCGCGTGCTGGAACTGGTCAGCAACCTCAACGAAGAAGACCGCGTCATCTTCCTGCTGTCTGGCGGTGGCTCGGCGTTGCTGGC  >  3:170279/1‑149                                                                                                                                                                                                                     TCTTCTGGCAGTTGGCGCCGTGGCCGTAACGGGTCACGACCAGGCCGGAGACTTCACCCTGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4891073‑4891009 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgccagAAGATCGAGGTGGTCGAAGCCGCCCACCCGGTCCCGGACGCTGCCGGCCTGGCTGTGGCCAAGCGCGTGCTGGAACTGGTCAGCAACCTCAACGAAGAAGACCGCGTCATCTTCCTGCTGTCTGGCGGTGGCTCGGCGTTGCTGGC  >  NC_002947/4891070‑4891215

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.