| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5231328 | 43 (0.870) | 4 (0.090) | 4/242 | NT | 8.2% | coding (1368/1578 nt) | PP_4610 | PepSY‑associated TM helix domain‑containing protein |
| ? | NC_002947 | = 5231362 | 49 (1.050) | coding (1334/1578 nt) | PP_4610 | PepSY‑associated TM helix domain‑containing protein | |||||
GCTACGGGCGTGGGGCTGACCAGCATCTTGCGAGCCAGCCAGGCCAGAAACAGGCCGGTCCCCAGGGCTGTCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5231176‑5231328‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagcaacTGGCGCTGGGGGCGCTGGCCTTCGCGCTGCTGCCGTTGCTCAATGGCCTGACGACTGACCGGGGCTTGAACCATTCGGTACTGGAGGGCGACTGGGCCATGGCCGGCTTCGATCTGACAGCCCTGGGGACCGGCCTGTTTCTG < NC_002947/5231362‑5231220 GCTACGGGCGTGGGGCTGACCAGCATCTTGCGAGCCAGCCAGGCCAGAAACAGGCCGGTCCCCAGGGCTGTCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGA < 7:22972/148‑1GCTACGGGCGTGGGGCTGACCAGCATCTTGCGAGCCAGCCAGGCCAGAAACAGGCCGGTCCCCAGGGCTGTCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCCGTCAGTCGTCAGGCCATTGAG > 5:8371/1‑149 TACGGGCGTGGGGCTGACCAGCATCTTGCGAGCCAGCCAGGCCAGAAACAGGCCGGTCCCCAGGGCTGTCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGC > 3:265075/1‑148 TACGGGCGTGGGGCTGACCAGCATCTTGCGAGCCAGCCAGGCCAGAAACAGGCCGGTCCCCAGGGCTGTCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGC > 3:269491/1‑148 CAGCATCTTGCGAGCCAGCCAGGCCAGAAAAAGGCCGGTCACCAGGGCTTTCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTACATTACCGAATGGTTAAAGCCCCGGTCAGTCTTCAGGCCATTGAGAAACTGGCGCTGGGGGCGCT > 2:190443/1‑149 AAACAGGCCGGTCCCCAGGGCTGTCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGTTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACTGGCGCTGGGGGCGCTGGCCTTCGCGCTGCTGCCGTTGCTCAA < 1:190443/149‑1 TCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACTGGCGCTGGGGGCGCTGGCCTTCGCGCTGCTGCCGTTGCTCAAT < 5:230211/127‑1 TCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACTGGCGCTGGGGGCGCTGGCCTTCGCGCTGCTGCCGTTGCTCAAT > 6:230211/1‑127 AGCAACTGGCGCTGGGGGCGCTGGCCTTCGCGCTGCTGCCGTTGCTCAATGGCCTGACGACTGACCGGGGCTTGAACCATTCGGTACTGGAGGGCGACTGGGCCATGGCCGGCTTCGATCTGACAGCCCTGGGGACCGGCCTGTTTCTG < 8:37004/149‑1 CTGGCGCTGGGGGCGCTGGCCTTCGCGCTGCTGCCGTTGCTCAATGGCCTGACGACTGACCGGGGCTTGAACCATTCGGTACTGGAGGGCGACTGGGCC < 5:47865/99‑1 CTGGCGCTGGGGGCGCTGGCCTTCGCGCTGCTGCCGTTGCTCAATGGCCTGACGACTGACCGGGGCTTGAACCATTCGGTACTGGAGGGCGACTGGGCC > 6:47865/1‑99 GCTACGGGCGTGGGGCTGACCAGCATCTTGCGAGCCAGCCAGGCCAGAAACAGGCCGGTCCCCAGGGCTGTCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5231176‑5231328‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagcaacTGGCGCTGGGGGCGCTGGCCTTCGCGCTGCTGCCGTTGCTCAATGGCCTGACGACTGACCGGGGCTTGAACCATTCGGTACTGGAGGGCGACTGGGCCATGGCCGGCTTCGATCTGACAGCCCTGGGGACCGGCCTGTTTCTG < NC_002947/5231362‑5231220 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |