New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5231328 | 43 (0.870) | 4 (0.090) | 4/242 | NT | 8.2% | coding (1368/1578 nt) | PP_4610 | PepSY‑associated TM helix domain‑containing protein |
? | NC_002947 | = 5231362 | 49 (1.050) | coding (1334/1578 nt) | PP_4610 | PepSY‑associated TM helix domain‑containing protein |
CAGAAACAGGCCGGTCCCCAGGGCTGTCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATGAAGAAAGCATTGACCTCCCAGTCGGCGCGGCCTTCGACAGCCATGGGCACCAGGCGGTTGGCCCAGAAGAAGCT > NC_002947/5231220‑5231504 | cAGAAACAGGCCGGTCCCCAGGGCTGTCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAgttgct < 8:37004‑M2/149‑7 (MQ=255) aaaCAGGCCGGTCCCCAGGGCTGTCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGc < 4:57517/149‑1 (MQ=255) gTCCCCAGGGCTGTCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCtt < 7:37004/149‑1 (MQ=255) cccAGGGCTGTCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTgcg > 5:89200/1‑149 (MQ=255) ccAGGGCTGTCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTgcgc > 3:189875/1‑149 (MQ=255) aGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACgcag > 5:94530/1‑149 (MQ=255) aGCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCg < 3:171629/149‑1 (MQ=255) gCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGt < 4:142903/149‑1 (MQ=255) ggCCATGGCCCAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCa > 2:6975/1‑149 (MQ=255) ccATGGCCCAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGATGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCAc > 4:64911/1‑148 (MQ=255) ggCCCAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAg > 6:47865‑M2/1‑98 (MQ=255) ggCCCAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAg < 5:47865‑M2/99‑2 (MQ=255) cAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAg < 6:94530/149‑1 (MQ=255) ccTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAg > 3:174277/1‑149 (MQ=255) gTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGAt > 6:235786/1‑148 (MQ=255) ccGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAg > 6:219120/1‑92 (MQ=255) ccGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAg < 5:219120/92‑1 (MQ=255) ccGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCAc < 5:262773/124‑1 (MQ=255) ccGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCAc > 6:262773/1‑124 (MQ=255) cGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCa > 6:259888/1‑125 (MQ=255) cGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCa < 5:259888/125‑1 (MQ=255) cGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATgaaga < 5:124210/149‑1 (MQ=255) cGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATgaag > 2:247933/1‑148 (MQ=255) gAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATgaagaa < 5:235786/149‑1 (MQ=255) gTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATGAAGAAAGCa < 4:189875/148‑1 (MQ=255) tCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGc < 8:165414/119‑1 (MQ=255) tCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGc > 7:165414/1‑119 (MQ=255) cccGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATGAAGAAAGCATTGACCTcc > 2:261996/1‑149 (MQ=255) cccGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATGAAGAAAGCATTGACCTcc < 1:261996/149‑1 (MQ=255) ccGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGAGCACCAGCGACAGGCCCCACGCGATGAAGAAACCATTGACCTcc > 4:254900/1‑148 (MQ=255) cGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATGAAGAAAGCATTGACCTCCCa < 6:89200/149‑1 (MQ=255) gtcAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATGAAGAAAGCATTGACCTCCCAGTCGGcgcg < 4:174277/149‑1 (MQ=255) tcAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATGAAGAAAGCATTGACCTCCCAGTCGGCGCgg < 1:247933/149‑1 (MQ=255) ggCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATGAAGAAAGCATTGACCTCCCAGTCGGCGCGGCCt > 3:188650/1‑149 (MQ=255) cATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATGAAGAAAGCATTGACCTCCCAGTCGGCGCGGCCTTc > 6:161984/1‑148 (MQ=255) aTTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAgttgctcaatggcctgacgactgaccggggcttgaaccattcggtactggagggcgactgggccatggccggcttcgatctga < 5:230211‑M2/127‑84 (MQ=255) aTTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAgttgctcaatggcctgacgactgaccggggcttgaaccattcggtactggagggcgactgggccatggccggcttcgatctga > 6:230211‑M2/1‑44 (MQ=255) aTTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATGAAGAAAGCa > 2:96109/1‑121 (MQ=255) aTTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATGAAGAAAGCa < 1:96109/121‑1 (MQ=255) ttGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAgttgctcaatggcctgacgactgaccggggcttgaaacattcggtactggagggcgactgggccatggccggcttcgatctgacagccctggggaccggcctgttt < 1:190443‑M2/149‑107 (MQ=255) tGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATGAAGAAAGCATTGACCTCCCAGTCGGCGCGGCCTTCGa > 6:107020/1‑147 (MQ=255) gAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATGAAGAAAGCATTGACCTCCCAGTCGGCGCGGCCTTCGACa < 5:107020/148‑1 (MQ=255) gCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATGAAGAAAGCATTGACCTCCCAGTCGGCGCGGCCTTCGACAGc > 4:278669/1‑148 (MQ=255) gcagcGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATGAAGAAAGCATTGACCTCCCAGTCGGCGCGGCCTTCGACAGCCATGGGCAcc < 4:188650/149‑1 (MQ=255) ggCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATGAAGAAAGCATTGACCTCCCAGTCGGCGCGGCCTTCGACAGCCATGGGCACCAGGCGGTTgg < 3:254900/149‑1 (MQ=255) gCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATGAAGAAAGCATTGACCTCCCAGTCGGCGCGGCCTTCGACAGCCATGGGCACCAGGCGGTTGGc > 8:169403/1‑149 (MQ=255) cAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATGAAGAAAGCATTGACCTCCCAGTCGGCGCGGCCTTCGACAGCCATggg > 6:121800/1‑132 (MQ=255) cAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATGAAGAAAGCATTGACCTCCCAGTCGGCGCGGCCTTCGACAGCCATggg < 5:121800/132‑1 (MQ=255) aGCGCCCCCAGCGCCAgtttctcaatggcctgaagactgaccggggctttaaccattcggtaatgtagggcgactgggccatggccggcttcgatctgaaagccctggtgaccggcctttttctggcctggctggctcgcaagatgctg > 2:190443‑M2/1‑16 (MQ=255) ccccAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATGAAGAAAGCATTGACCTCCCAGTCGGCGCGGCCTTCGACAGCCATGGGCACCAGGCGGTTGGCCCagaag > 4:61412/1‑148 (MQ=255) ccccAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATGAAGAAAGCATTGACCTCCCAGTCGGCGCGGCCTTCGACAGCCATGGGCACCAGGCGGTTGGCCCagaag > 4:258595/1‑148 (MQ=255) cccAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATGAAGAAAGCATTGACCTCCCAGTCGGCGCGGCCTTCGACAGCCATGGGCACCAGGCGGTTGGCCCagaag > 5:151117/1‑147 (MQ=255) cccAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATGAAGAAAGCATTGACCTCCCAGTCGGCGCGGCCTTCGACAGCCATGGGCACCAGGCGGTTGGCCCAgaagaa < 1:6975/149‑1 (MQ=255) cAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATGAAGAAAGCATTGACCTCCCAGTCGGCGCGGCCTTCGACAGCCATGGGCACCAGGCGGTTGGCCCag < 7:284428/142‑1 (MQ=255) cAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATGAAGAAAGCATTGACCTCCCAGTCGGCGCGGCCTTAGACAGCCATGGGCACCAGGCGGTTGGCCCag > 8:284428/1‑142 (MQ=255) aGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATGAAGAAAGCATTGACCTCCCAGTCGGCGCGGCCTTCGACAGCCATGGGCACCAGGCGGTTGGCCCAGAAGAAGCt < 3:258595/149‑1 (MQ=255) aGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATGAAGAAAGCATTGACCTCCCAGTCGGCGCGGCCTTCGACAGCCATGGGCACCAGGCGGTTGGCCCAGAAGAAGCt > 4:98556/1‑149 (MQ=255) cAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATGAAGAAAGCATTGACCTCCCAGTCGGCGCGGCCTTCGACAGCCATGGGCACCAGGCGGTTGGCCCAgaagaa < 7:269837/141‑1 (MQ=255) cAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATGAAGAAAGCATTGACCTCCCAGTCGGCGCGGCCTTCGACAGCCATGGGCACCAGGCGGTTGGCCCAgaagaa > 8:269837/1‑141 (MQ=255) | CAGAAACAGGCCGGTCCCCAGGGCTGTCAGATCGAAGCCGGCCATGGCCCAGTCGCCCTCCAGTACCGAATGGTTCAAGCCCCGGTCAGTCGTCAGGCCATTGAGCAACGGCAGCAGCGCGAAGGCCAGCGCCCCCAGCGCCAGTTGCTCGCCCCAGGCCTTGCGCCCGCTACGCAGCACGGCGTGCACCAGCGACAGGCCCCAGGCGATGAAGAAAGCATTGACCTCCCAGTCGGCGCGGCCTTCGACAGCCATGGGCACCAGGCGGTTGGCCCAGAAGAAGCT > NC_002947/5231220‑5231504 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |