New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5432480	56 (1.130)	4 (0.090)	4/242	NT	6.8%	coding (334/519 nt)	PP_5713	hypothetical protein
	?	NC_002947	= 5432517	57 (1.220)					coding (371/519 nt)	PP_5713	hypothetical protein

TTTCATTACCACTCGCGGACCAACGATCGCCTGCACTACCGCATCAGCATGCCAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5432327‑5432480 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgctggTCGCGCAGATGGCAGACAAGTCCTTCATCTGTCAGCGCCAGCGGCTCGATTTTCCAGTATTCGCTAACCTCTGCATGCCAGTAGAAGCCCAGATAGCCATTGCGGCTGAATCCTAGCTTCTTGGTCTCCGGGCGCCCTGGCATGC  <  NC_002947/5432517‑5432373                                                                                                                                                                                                                                                                                                             TTTCATTACCACTCGCGGACCAACGATCGCCTGCACTACCGCATCAGCATGCCAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCC                                                                                                                                                        >  7:176923/1‑149                                   ACTACCGCATCAGCATGCCAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGTCGCGCAGATGGCAGACAAGTCCTTCATC                                                                                                                      >  4:90940/1‑149                                                    CCAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGTCGCGCAGATGGCAGACAAGTCCTTCATCTGTCAGCGCCAGCGGCT                                                                                                     <  3:267344/149‑1                                                     CAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGTCGCGCAGATGGCAGACAAGTCCTTCATCTGTCAGCGCCAGCGGCTC                                                                                                    <  3:90940/149‑1                                                        GGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGTCGCGCAGATGGCAGACAAGTCCTTCATCTGTCAGCGCCAGCGGCTCGAT                                                                                                 <  7:152807/149‑1                                                                                                                                                       CTGGTCGCGCAGATGGCAGACAAGTCCTTCATCTGTCAGCGCCAGCGGCTCGATTTTCCAGTATTCGCTAACCTCTGCATGCCAGTAGAAGCCCAGATAGCCATTGCGGCTGAATCCTAGCTTCTTGGTCTCCGGGCGCCCTGGCATGC  <  1:156108/149‑1                                                                                                                                                                                                                                                                                                             TTTCATTACCACTCGCGGACCAACGATCGCCTGCACTACCGCATCAGCATGCCAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5432327‑5432480 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgctggTCGCGCAGATGGCAGACAAGTCCTTCATCTGTCAGCGCCAGCGGCTCGATTTTCCAGTATTCGCTAACCTCTGCATGCCAGTAGAAGCCCAGATAGCCATTGCGGCTGAATCCTAGCTTCTTGGTCTCCGGGCGCCCTGGCATGC  <  NC_002947/5432517‑5432373

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.