New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5432480	56 (1.130)	4 (0.090)	4/242	NT	6.8%	coding (334/519 nt)	PP_5713	hypothetical protein
	?	NC_002947	= 5432517	57 (1.220)					coding (371/519 nt)	PP_5713	hypothetical protein

GCATGCCAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTATTGAGGCAGGCAGATCGAGCTTCACTGGCCGGGGCAATAC  >  NC_002947/5432373‑5432660                                                                                                                                                 |                                                                                                                                                gCATGCCAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGAccag                                                                                                                                             <  1:156108‑M2/149‑5 (MQ=255)      ccAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCgggg                                                                                                                                        <  5:254190/149‑1 (MQ=255)      ccAGCGCGCCCGGACACCACGACCCCACGATCCCGCCGCCACCGCTATCTGCGCTTCTACTGCCATGCAGAGGTTAGCGAATACTCCAAAATCGAGCCGCTCCCGCTGACAGACGCAGGACCTGTCTGCCATCTGCGCGACCAGCgg                                                                                                                                          <  4:246861/147‑1 (MQ=255)        aGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGc                                                                                                                                       >  7:3221/1‑148 (MQ=255)          ggCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTAc                                                                                                                                    <  2:228092/149‑1 (MQ=255)             gcCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAgg                                                                                                                                 <  2:64900/149‑1 (MQ=255)                  gagaCCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCgg                                                                                                                            <  2:254206/149‑1 (MQ=255)                     aCCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGgcgc                                                                                                                         >  4:166922/1‑149 (MQ=255)                       cAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGccc                                                                                                                       >  6:141268/1‑149 (MQ=255)                       cAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGccc                                                                                                                       >  7:209195/1‑149 (MQ=255)                        aagaagCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCt                                                                                                                      >  3:185487/1‑149 (MQ=255)                           aagCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGgcgtatccgt                                                                                                                   >  8:24740/1‑142 (MQ=255)                              cTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGa                                                                                                                >  4:52563/1‑149 (MQ=255)                               tAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCggg                                                                                                                                         >  1:12868/1‑123 (MQ=255)                               tAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCggg                                                                                                                                         <  2:12868/123‑1 (MQ=255)                               tAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGa                                                                                                                >  6:69868/1‑148 (MQ=255)                                aGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATa                                                                                                              >  8:36287/1‑149 (MQ=255)                                    ttCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATAcgcc                                                                                                          >  8:70461/1‑149 (MQ=255)                                      cAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATAcgccg                                                                                                         <  3:52563/148‑1 (MQ=255)                                       aGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGca                                                                                                       >  6:225326/1‑149 (MQ=255)                                       aGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGACATCTGCGCGACCACCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGca                                                                                                       >  7:283766/1‑149 (MQ=255)                                          cGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAg                                                                                                    <  2:156108/149‑1 (MQ=255)                                          cGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAg                                                                                                    <  5:141268/149‑1 (MQ=255)                                           gCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAg                                                                                                    >  3:143245/1‑148 (MQ=255)                                               tGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCTCGACCAGCGCGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAggagtg                                                                                               >  8:27703/1‑149 (MQ=255)                                                 gCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAggagtggg                                                                                             <  7:36287/149‑1 (MQ=255)                                                  cTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAggagtggg                                                                                             >  7:214306/1‑148 (MQ=255)                                                         ggCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAggagtggggagtg                                                                                        <  8:3221/146‑1 (MQ=255)                                                              cTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCt                                                                                >  5:266092/1‑149 (MQ=255)                                                                 cTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTg                                                                               <  8:214306/147‑1 (MQ=255)                                                                 cTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGc                                                                             <  7:27703/149‑1 (MQ=255)                                                                 cTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGc                                                                             <  5:95983/149‑1 (MQ=255)                                                                      aTGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAAc                                                                        >  8:169402/1‑149 (MQ=255)                                                                      aTGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAAc                                                                        <  8:176923/149‑1 (MQ=255)                                                                      aTGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAAc                                                                        <  8:209195/149‑1 (MQ=255)                                                                           gagGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGa                                                                   <  2:11966/149‑1 (MQ=255)                                                                               ttAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGaa                                                               <  7:169402/149‑1 (MQ=255)                                                                                          tGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGAt                                                    >  6:176437/1‑149 (MQ=255)                                                                                             aaaaTCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTTGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCAc                                                 <  2:68412/149‑1 (MQ=255)                                                                                                aTCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGAccagcggctcgattttccagtattcgctaacctctgcatgccagtagaagcccagatagccattgcggctgaatcctagcttcttggtctccgggcgcc                                              <  7:152807‑M2/149‑100 (MQ=255)                                                                                                 tCGAGCCGGTGGCGCTGACAGTTGTAGGACTTGTCTGCGATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGGCGCTCAGGAGTGGGGAGTGGGTAGCCTGGGTCAACGTCGAGGAAgg                                                             <  8:152273/133‑1 (MQ=255)                                                                                                 tCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAgg                                                             >  7:152273/1‑133 (MQ=255)                                                                                                 tCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTc                                             <  3:166922/149‑1 (MQ=255)                                                                                                   gAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGAccagcggctcgattttccagtattcgctaacctctgcatgccagtagaagcccagatagccattgcggctgaatcctagcttcttggtctccgggcgccctg                                           <  3:90940‑M2/149‑103 (MQ=255)                                                                                                   gAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGACCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGATCAACGTCGAGGAAGGCGAAGTGATCACGATcc                                            >  1:209065/1‑148 (MQ=255)                                                                                                    aGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGAccagcggctcgattttccagtattcgctaacctctgcatgccagtagaagcccagatagccattgcggctgaatcctagcttcttggtctccgggcgccctgg                                          <  3:267344‑M2/149‑104 (MQ=255)                                                                                                    aGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTa                                          >  6:176817/1‑149 (MQ=255)                                                                                                     gCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTAt                                         <  7:70461/149‑1 (MQ=255)                                                                                                         cTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTATTGag                                     <  5:176817/149‑1 (MQ=255)                                                                                                             cgcTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTATTGaggcag                                 <  4:185487/149‑1 (MQ=255)                                                                                                                tGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTATTGaggcagg                                >  2:155222/1‑147 (MQ=255)                                                                                                                    aGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGc                                                            >  5:168933/1‑115 (MQ=255)                                                                                                                    aGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGc                                                            <  6:168933/115‑1 (MQ=255)                                                                                                                    aGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTATTGaggcagg                                >  4:213705/1‑143 (MQ=255)                                                                                                                    aGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTATTGaggcagg                                >  3:279047/1‑143 (MQ=255)                                                                                                                     gATGAAGGACTTGTCTGCCATCTGCGCGAccagcggctcgattttccagtattcgctaacctctgcatgccagtagaagcccagatagccattgcggctgaatcctagcttcttggtctccgggcgccctggcatgctgatgcggtagt                         >  4:90940‑M2/1‑29 (MQ=255)                                                                                                                      aTGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAggagtggg                                                                                             >  7:106187/1‑80 (MQ=255)                                                                                                                      aTGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAggagtggg                                                                                             <  8:106187/80‑1 (MQ=255)                                                                                                                      aTGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGaa                                                         >  1:115160/1‑116 (MQ=255)                                                                                                                      aTGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGaa                                                         <  2:115160/116‑1 (MQ=255)                                                                                                                            gACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGTGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTATTGAGGCAGGCAGATCGAGCTTCa                  <  5:225326/149‑1 (MQ=255)                                                                                                                                    tGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTATTGAGGCAGGCAGATCGAGc                      <  5:259411/137‑1 (MQ=255)                                                                                                                                    tGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTATTGAGGCAGGCAGATCGAGc                      >  6:259411/1‑137 (MQ=255)                                                                                                                                      ccATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTATTGAGGCAGGCAGATCGAGCTTCACTGGCCgggg        <  4:143245/149‑1 (MQ=255)                                                                                                                                       cATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTATTGAGGCAGGCAGATCGAGCTTCACTGGCCgggg        >  7:81003/1‑148 (MQ=255)                                                                                                                                       cATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTATTGAGGCAGGCAGATCGAGCTTCACTGGCCgggg        <  8:81003/148‑1 (MQ=255)                                                                                                                                       cATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTATTGAGGCAGGCAGATCGAGCTTCACTGGCCGGGGc       <  6:266092/149‑1 (MQ=255)                                                                                                                                             cgcgACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTATTGAGGCAGGCAGATCGAGCTTCACTGGCCGGGGCAATa   <  2:209065/147‑1 (MQ=255)                                                                                                                                             cgcgACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTATTGAGGCAGGCAGATCGAGCTTCACTGGCCGGGGCAATAc  >  1:136855/1‑148 (MQ=255)                                                                                                                                                 |                                                                                                                                                GCATGCCAGGGCGCCCGGAGACCAAGAAGCTAGGATTCAGCCGCAATGGCTATCTGGGCTTCTACTGGCATGCAGAGGTTAGCGAATACTGGAAAATCGAGCCGCTGGCGCTGACAGATGAAGGACTTGTCTGCCATCTGCGCGACCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTATTGAGGCAGGCAGATCGAGCTTCACTGGCCGGGGCAATAC  >  NC_002947/5432373‑5432660

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.