| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6078715 | 55 (1.110) | 3 (0.060) | 3/242 | NT | 5.7% | coding (511/1290 nt) | PP_5330 | MFS transporter |
| ? | NC_002947 | = 6078761 | 47 (1.010) | coding (465/1290 nt) | PP_5330 | MFS transporter | |||||
GGGTTTCGTGCAGCCAGCGGCGCAGGTACACCGAGAACAGGCCGAACACACCGCCAAGCAGGAACGGGATTCGCCAGGCGTAGTCAGCCACTTCTTCCGCGCTGTACACGCTGTTGATCAAGGTCGCTACCAGCGAGCCCAGCAGAATGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6078562‑6078715‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccggcTCGCAACACCGGCTATGCCTGCGGCACCCTGACCGCCGGCCTGACCGCCGGCATTCTGCTGGGCTCGCTGGTAGCGACCTTGATCAACAGCGTGTACAGCGCGGAAGAAGTGGCTGACTACGCCTGGC < NC_002947/6078761‑6078634 GGGTTTCGTGCAGCCAGCGGCGCAGGTACACCGAGAACAGGCCGAACACACCGCCAAGCAGGAACGGGATTCGCCAGGCGTAGTCAGCCACTTCTTCCGCGCTGTACACGCTGTTGATCAAGGTCGCTACCAGCGAGCCCAGCAGAATG > 3:225641/1‑149 GGTTTCGTGCAGCCAGCGGCGCAGGTACACCGAGAACAGGCCGAACACACCGCCAAGCAGGAACGGGATTCGCCAGGCGTAGTCAGCCACTTCTTCCGCGCTGTACACGCTGTTGATCAAGGTCGCTACCAGCGAGCCCAGCAGAATGC > 7:278146/1‑149 TCGTGCAGCCAGCGGCGCAGGTACACCGAGAACAGGCCGAACACACCGCCAAGCAGGAACGGGATTCGCCAGGCGTAGTCAGCCACTTCTTCCGCGCTGTACACGCTGTTGATCAAGGTCGCTACCAGCGAGCCCAGCAGAATGCCGGC > 4:267383/1‑149 TCGTGCAGCCAGCGGCGCAGGTACACCGAGAACAGGCCGAACACACCGCCAAGCAGGAACGGGATTCGCCAGGCGTAGTCAGCCACTTCTTCCGCGCTGTACACGCTGTTGATCAAGGTCGCTACCAGCGAGCCCAGCAGAATGCCGG < 5:249495/148‑1 ACACCGCCAAGCAGGAACGGGATTCGCCAGGCGTAGTCAGCCACTTCTTCCGCGCTGTACACGCTGTTGATCAAGGTCGCTACCAGCGAGCCCAGCAGAATGCCGGCTCGCAACACCGGCTATGCCTGCGGCACCCTGACCGCCGGCCT > 1:149772/1‑149 AGCAGGAACGGGATTCGCCAGGCGTAGTCAGCCACTTCTTCCGCGCTGTACACGCTGTTGATCAAGGTCGCTACCAGCGAGCCCAGCAGAATGCCGGCTCGCAACACCGGCTATGCCTGCGGCACCCTGACCGCCGGCCTGACCGCCGG < 2:149772/149‑1 GGAACGGGTTTCGCCAGGCGTACTCAGCCACTTCTTCCTCGCTGTACTCGCTGTTGATCAAGGTCGCTACCAGCGAGACCAGCAGAATTCCGGCTCGCAACACCGGCTATGCCTGCGGCACCCAGACCGCCGGCCTGACCGCCGGCATT < 3:167883/149‑1 CCGGCTCGCAACACCGGCTATGCCTGCGGCACCCTGACCGCCGGCCTGACCGCCGGCATTCTGCTGGGCTCGCTGGTAGCGACCTTGATCAACAGCGTGTACAGCGCGGAAGAAGTGGCTGACTACGCCTGGC < 3:263158/133‑1 CCGGCTCGCAACACCGGCTATGCCTGCGGCACCCTGACCGCCGGCCTGACCGCCGGCATTCTGCTGGGCTCGCTGGTAGCGACCTTGATCAACAGCGTGTACAGCGCGGAAGAAGTGGCTGACTACGCCTGGC > 4:263158/1‑133 GGGTTTCGTGCAGCCAGCGGCGCAGGTACACCGAGAACAGGCCGAACACACCGCCAAGCAGGAACGGGATTCGCCAGGCGTAGTCAGCCACTTCTTCCGCGCTGTACACGCTGTTGATCAAGGTCGCTACCAGCGAGCCCAGCAGAATGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6078562‑6078715‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccggcTCGCAACACCGGCTATGCCTGCGGCACCCTGACCGCCGGCCTGACCGCCGGCATTCTGCTGGGCTCGCTGGTAGCGACCTTGATCAACAGCGTGTACAGCGCGGAAGAAGTGGCTGACTACGCCTGGC < NC_002947/6078761‑6078634 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |