New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 192172	31 (0.630)	4 (0.090)	4/238	NT	11.8%	coding (1346/2157 nt)	paxB	toxin secretion ATP‑binding protein
	?	NC_002947	= 192235	31 (0.680)					coding (1283/2157 nt)	paxB	toxin secretion ATP‑binding protein

CTGGTTCGGATAAGTGAAGTCGACCCCGCGGAACTCGACGCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGTTG  >  NC_002947/192030‑192320                                                                                                                                               |                                                                                                                                                     ctgGTTCGGATAAGTGAAGTCGACCCCGCGGAACTCGACGCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGc                                                                                                                                                <  3:208996/149‑1 (MQ=255)    gTTCGGATAAGTGAAGTCGACCCCGCGGAACTCGACGCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCggg                                                                                                                                             >  4:205635/1‑149 (MQ=255)          aTAAGTGAAGTCGACCCCGCGGAACTCGACGCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAg                                                                                                                                                 >  7:287547/1‑139 (MQ=255)          aTAAGTGAAGTCGACCCCGCGGAACTCGACGCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAg                                                                                                                                                 <  8:287547/139‑1 (MQ=255)                 aaGTCGACCCCGCGGAACTCGACGCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGtt                                                                                                                                <  1:171109/149‑1 (MQ=255)                         cccGCGGAACTCGACGCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGc                                                                                                                        >  8:292603/1‑149 (MQ=255)                           cgcgGAACTCGACGCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGcc                                                                                                                       >  1:56799/1‑148 (MQ=255)                            gcgGAACTCGACGCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGccc                                                                                                                      >  5:100525/1‑148 (MQ=255)                                     gACGCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGc                                                                                                                                    <  2:104296/125‑1 (MQ=255)                                     gACGCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGc                                                                                                                                    >  1:104296/1‑125 (MQ=255)                                      aCGCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAg                                                                                                           <  7:42308/149‑1 (MQ=255)                                       cGCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTacatgctcagcggccgtgccctcggcccgttgggccagctcaac                                                                                                          >  8:133701‑M1/1‑105 (MQ=255)                                             ccTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACgg                                                                                                    >  5:155062/1‑149 (MQ=255)                                               tGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGcc                                                                                                                                   >  2:224693/1‑116 (MQ=255)                                               tGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGcc                                                                                                                                   <  1:224693/116‑1 (MQ=255)                                                    caCCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGa                                                                                             <  3:205635/149‑1 (MQ=255)                                                           cGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTa                                                                                      >  6:11391‑M2/1‑148 (MQ=255)                                                             gCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTacatgctcagcggccgtgccctcggcccgttgggccagctcaacggcctgctggcccgctaccagc                                                                                    <  7:133701‑M1/149‑67 (MQ=255)                                                             gCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTag                                                                                     <  3:299613‑M2/148‑3 (MQ=255)                                                                  gCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACgg                                                                                                                 <  6:143882/115‑1 (MQ=255)                                                                  gCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACgg                                                                                                                 >  5:143882/1‑115 (MQ=255)                                                                  gCGGGCGTTCTTCGAAGGTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTagcaagcc                                                                               >  6:256400‑M2/1‑141 (MQ=255)                                                                        gTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTacatgctcagcggccgtgccctcggcccgttgggccagctcaacggcctgctggcccgctaccagcaagccaaggt                                                                          >  2:66256‑M1/1‑72 (MQ=255)                                                                        gTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCAt                                                                                         <  3:72966/133‑1 (MQ=255)                                                                        gTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCAt                                                                                         >  4:72966/1‑133 (MQ=255)                                                                        gTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAgg                                                                         >  1:18013/1‑149 (MQ=255)                                                                        gTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAgg                                                                         >  8:285662/1‑149 (MQ=255)                                                                              cGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTacatgctcagcggccgtgccctcggcccgttgggccagctcaacggcctgctggcccgctaccagcaagccaaggtgaccat                                                                    <  1:66256‑M1/148‑83 (MQ=255)                                                                                      cgcTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGTCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCa                                                            <  6:163415/148‑1 (MQ=255)                                                                                      cgcTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAg                                                           <  2:266836/149‑1 (MQ=255)                                                                                       gcTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAgg                                                          <  7:223598/149‑1 (MQ=255)                                                                                       gcTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAgg                                                          <  6:100525/149‑1 (MQ=255)                                                                                             gCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGcc                                                     <  4:299613/148‑1 (MQ=255)                                                                                                              tgGTCGGTGGAGACCATGGTCACCTTTGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATg                                                                                        >  4:298801/1‑96 (MQ=255)                                                                                                              tgGTCGGTGGAGACCATGGTCACCTTTGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATg                                                                                        <  3:298801/96‑1 (MQ=255)                                                                                                              tgGACGGTGGAGACCATGGTCACCATGGCTAGCTGGTAGCGCGCCAGCAGGCCCTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTaccc                                   >  1:120840/1‑147 (MQ=255)                                                                                                                gTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGc                                 >  4:234485/1‑149 (MQ=255)                                                                                                                       gagaCCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACg                            >  6:98687/1‑147 (MQ=255)                                                                                                                             aTGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTagcaagccaaggtgaccatggtctccaccgaccacatgatggatctaccgcaagagcgcaacttcg                     <  1:66256‑M2/148‑67 (MQ=255)                                                                                                                               ggTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTg                  >  5:149779/1‑149 (MQ=255)                                                                                                                                   aCCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTagcaagccaaggtgaccatggtctccaccgaccacatgatggatctaccgcaagagcgcaacttcgaagaac               >  2:66256‑M2/1‑76 (MQ=255)                                                                                                                                   aCCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCAc              >  2:182257/1‑149 (MQ=255)                                                                                                                                        ggCTTGCTacatgctcagcggccgtgccctcggcccgttgggccagctcaacggcctgctggcccgctaccagcaagccaaggtgaccatggtctccaccgaccacatgatggatctaccgcaagagcgcaccttcgaagaacgcccgc         >  6:256400‑M1/1‑8 (MQ=255)                                                                                                                                             gCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTagcaagccaaggtgaccatggtctccaccgaccacatgatggatctaccgcaagagcgcaacttcgaagaacgcccgctgagc    <  7:133701‑M2/149‑84 (MQ=255)                                                                                                                                              cTacatgctcagcggccgtgccctcggcccgttgggccagctcaacggcctgctggcccgctaccagcaagccaaggtgaccatggtctccaccgaccacatgatggatctaccgcaagagcgcaacttcgaagaacgcccgctgagc    <  3:299613‑M1/148‑147 (MQ=255)                                                                                                                                              cTGGTAGGGGGCCAGCAGGCCGTTGAGCTGGCCCATCGGGGCGAGGGCACGGCCGCTGAGCATGTAGCTTGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGtt   <  2:120840/149‑1 (MQ=255)                                                                                                                                               tacatgctcagcggccgtgccctcggcccgttgggccagctcaacggcctgctggcccgctaccagcaagccaaggtgaccatggtctccaccgaccacatgatggatctaccgcaagagcgcaacttcgaagaacgcccgctgagccg  >  6:11391‑M1/1‑1 (MQ=255)                                                                                                                                               |                                                                                                                                                     CTGGTTCGGATAAGTGAAGTCGACCCCGCGGAACTCGACGCTGCCCTGCAGCACCTTGCGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGTTG  >  NC_002947/192030‑192320

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.