New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 192172	31 (0.630)	4 (0.090)	4/238	NT	11.8%	coding (1346/2157 nt)	paxB	toxin secretion ATP‑binding protein
	?	NC_002947	= 192235	31 (0.680)					coding (1283/2157 nt)	paxB	toxin secretion ATP‑binding protein

CGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGTTGCTGGATCAGCAGGGTGATGTTCATCGCCAGGCTCGACAGCACTTTCACGCGCAGTTCCAG  >  NC_002947/192088‑192380                                                                                                                                                     |                                                                                                                                                  cGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTa                                                                                                                                                  >  6:11391‑M2/1‑148 (MQ=255)   gCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTag                                                                                                                                                 <  3:299613‑M2/148‑3 (MQ=255)        gCGGGCGTTCTTCGAAGGTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTagcaagcc                                                                                                                                           >  6:256400‑M2/1‑141 (MQ=255)              gTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTAGCAAGCCACCAgg                                                                                                                                     >  8:285662/1‑149 (MQ=255)              gTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTAGCAAGCCACCAgg                                                                                                                                     >  1:18013/1‑149 (MQ=255)                            cgcTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGTCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTAGCAAGCCACCAGGCCGCCCATGCTCa                                                                                                                        <  6:163415/148‑1 (MQ=255)                            cgcTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAg                                                                                                                       <  2:266836/149‑1 (MQ=255)                             gcTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAgg                                                                                                                      <  6:100525/149‑1 (MQ=255)                             gcTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAgg                                                                                                                      <  7:223598/149‑1 (MQ=255)                                   gCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGcc                                                                                                                 <  4:299613/148‑1 (MQ=255)                                                    tgGACGGTGGAGACCATGGTCACCATGGCTAGCTGGTAGCGCGCCAGCAGGCCCTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTaccc                                                                                               >  1:120840/1‑147 (MQ=255)                                                      gTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGc                                                                                             >  4:234485/1‑149 (MQ=255)                                                             gagaCCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACg                                                                                        >  6:98687/1‑147 (MQ=255)                                                                   aTGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTagcaagccaaggtgaccatggtctccaccgaccacatgatggatctaccgcaagagcgcaacttcg                                                                                 <  1:66256‑M2/148‑67 (MQ=255)                                                                     ggTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTg                                                                              >  5:149779/1‑149 (MQ=255)                                                                         aCCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTagcaagccaaggtgaccatggtctccaccgaccacatgatggatctaccgcaagagcgcaacttcgaagaac                                                                           >  2:66256‑M2/1‑76 (MQ=255)                                                                         aCCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCAc                                                                          >  2:182257/1‑149 (MQ=255)                                                                                   gCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTagcaagccaaggtgaccatggtctccaccgaccacatgatggatctaccgcaagagcgcaacttcgaagaacgcccgctgagc                                                                <  7:133701‑M2/149‑84 (MQ=255)                                                                                    cTGGTAGGGGGCCAGCAGGCCGTTGAGCTGGCCCATCGGGGCGAGGGCACGGCCGCTG‑AGCATGTAGCTTGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGtt                                                               <  2:120840/149‑1 (MQ=255)                                                                                       gTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCTGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGTTGCt                                                            <  2:18013/149‑1 (MQ=255)                                                                                        tAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGTTGCt                                                            >  3:76085/1‑148 (MQ=255)                                                                                        tAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGTTGCt                                                            <  4:76085/148‑1 (MQ=255)                                                                                                cagcagGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTGAAGCATGTAGCAAGCCCCCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGTTGCTGGATcag                                                     >  1:69365/1‑148 (MQ=255)                                                                                                 agcagGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGTTGCTGGATcagcag                                                  >  6:15337/1‑149 (MQ=255)                                                                                                  gcagGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTCGCAAGCCACCAGGCCGCCCATGGTCAGGTTGCCGGCGATGATCAGGTACCCGCCGACGCAGATCATTGCCCCGCCTGCCAGTTGCGGGATCAGCAgg                                                 >  3:99521/1‑149 (MQ=255)                                                                                                   cagGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGTTGCTg                                                           <  6:77679/138‑1 (MQ=255)                                                                                                   cagGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGTTGCTg                                                           >  5:77679/1‑138 (MQ=255)                                                                                                     ggCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGTTGCTGGATCAGCAGGGt                                               >  3:309838/1‑148 (MQ=255)                                                                                                     ggCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGTTGCTGGATCAGCAGGGt                                               >  8:243529/1‑148 (MQ=255)                                                                                                        cGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGTTGCTGGATCAGCAGGGTGATg                                           <  4:309838/149‑1 (MQ=255)                                                                                                         gTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTagcaagccaaggtgaccatggtctccaccgaccacatgatggatctaccgcaagagcgcaacttcgaagaacgcccgctgagccgcaaggtgctgcagggcagcg                                          >  8:133701‑M2/1‑44 (MQ=255)                                                                                                                  gCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGTTGCTGGATCAGCAGGGTGATGTTCATCGCCa                                 <  3:234485/149‑1 (MQ=255)                                                                                                                   cccAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACCCGCCGACGCAGATCATTGCCACGCCTGCCAGTTGCTGGATCAGCAGGGTGATGTTCATCGCCAg                                >  1:234544/1‑149 (MQ=255)                                                                                                                    ccAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACTCCGACGCAGATCATTGCCACGCCTGCCAGTTGCTGGATCAGCAGGGTGATGTTCATCGCCAgg                               >  4:117738/1‑149 (MQ=255)                                                                                                                      aaCGGGCCGAGGGCACGGCCGCTG‑AGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGTTGCTGGATCAGCAGGGTGATGt                                          <  4:99378/136‑1 (MQ=255)                                                                                                                      aaCGGGCCGAGGGCACGGCCGCTG‑AGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGTTGCTGGATCAGCAGGGTGATGt                                          >  3:99378/1‑136 (MQ=255)                                                                                                                                   cACGGCCGCTT‑AGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGTTGCTGGATCAGCAGGGTGATGTTCATCGCCAGGCTCGACAGCACTTTc                <  2:56799/149‑1 (MQ=255)                                                                                                                                          gCTG‑AGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGTTGCTGGATCAGCAGGGTGATGTTCATCGCCAGGCTCGACAGCACTTTCACGCGCa         <  6:149779/149‑1 (MQ=255)                                                                                                                                          gCTG‑AGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGTTGCTGGATCAGCAGGGTGATGTTCATCGCCAGGCTCGACAGCACTTTCACGCGCa         <  7:243529/149‑1 (MQ=255)                                                                                                                                               aGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGTTGCTGGATCAGCAGGGTGATGTTCATCGCCAGGCTCGACAGCACTTTCACGCGCAGtt      <  7:292603/148‑1 (MQ=255)                                                                                                                                                  aTGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGTTGCTGGATCAGCAGGGTGAt                                            >  5:259889/1‑107 (MQ=255)                                                                                                                                                  aTGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGTTGCTGGATCAGCAGGGTGAt                                            <  6:259889/107‑1 (MQ=255)                                                                                                                                                  aTGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGTTGCTGGATCAGCAGGGTGATGTTCATCGCCAGGCTCGACAGCACTTTCACGCGCAGTTCCAg  >  5:297750/1‑149 (MQ=255)                                                                                                                                                     tAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGTTGCTGGATCAGCAGGGTGATGTTCATCGCCAGGCTCGAc                         <  2:136075/123‑1 (MQ=255)                                                                                                                                                     tAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGTTGCTGGATCAGCAGGGTGATGTTCATCGCCAGGCTCGAc                         >  1:136075/1‑123 (MQ=255)                                                                                                                                                     |                                                                                                                                                  CGGCTCAGCGGGCGTTCTTCGAAGTTGCGCTCTTGCGGTAGATCCATCATGTGGTCGGTGGAGACCATGGTCACCTTGGCTTGCTGGTAGCGGGCCAGCAGGCCGTTGAGCTGGCCCAACGGGCCGAGGGCACGGCCGCTG‑AGCATGTAGCAAGCCACCAGGCCGCCCATGCTCAGGTTGCCGTCGATGATCAGGTACACGCCGACGCAGATCATTGCCACGCCTGCCAGTTGCTGGATCAGCAGGGTGATGTTCATCGCCAGGCTCGACAGCACTTTCACGCGCAGTTCCAG  >  NC_002947/192088‑192380

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.