New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 440717	46 (0.930)	4 (0.090)	4/244	NT	8.3%	coding (658/1059 nt)	bioB	biotin synthase
	?	NC_002947	= 440759	45 (0.960)					coding (700/1059 nt)	bioB	biotin synthase

CCACGCGTACCTACAGCGAGCGCCTGCAGACCCTGGCCTACGTGCGCGACGCCGGGATGAAAATCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATCCTCATGCCCAAGTCTCACGTGCGCCTGTCCG  >  NC_002947/440574‑440864                                                                                                                                                |                                                                                                                                                    ccacGCGTACCTACAGCGAGCGCCTGCAGACCCTGGCCTACGTGCGCGACGCCGGGATGAAAATCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAacac                                                                                                                                                >  1:145211/1‑149 (MQ=255)  cacGCGTACCTACAGCGAGCGCCTGCAGACCCTGGCCTACGTGCGCGACGCCGGGATGAAAATCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACAcc                                                                                                                                               >  7:4185/1‑149 (MQ=255)    cgcgTACCTACAGCGAGCGCCTGCAGACCCTGGCCTACGTGCGCGACGCCGGGATGAAAATCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCg                                                                                                                                             <  5:194563/149‑1 (MQ=255)      cgTACCTACAGCGAGCGCCTGCAGACCCTGGCCTACGTGCGCGACGCCGGGATGAAAATCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGa                                                                                                                                           <  3:278696/149‑1 (MQ=255)        tACCTACAGCGAGCGCCTGCAGACCGTGGCCTAGGTGCGCGACGCCGGTATGAAAATCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCATGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGt                                                                                                                                         <  6:264863/149‑1 (MQ=255)        tACCTACAGCGAGCGCCTGCAGACCCTGGCCTACGTGCGCGACGCCGGGATGAAAATCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGt                                                                                                                                         <  4:52545/149‑1 (MQ=255)           cTACAGCGAGCGCCTGCAGACCCTGGCCTACGTGCGCGACGCCGGGATGAAAATCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCgg                                                                                                                                      <  8:4185/149‑1 (MQ=255)           cTACAGCGAGCGCCTGCAGACCCTGGCCTACGTGCGCGACGCCGGGATGAAAATCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCgg                                                                                                                                      >  7:123335/1‑149 (MQ=255)            tACAGCGAGCGCCTGCAGACCCTGGCCTACGTGCGCGACGCCGGGATGAAAATCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGt                                                                                                                                     >  1:184357/1‑149 (MQ=255)              cAGCGAGCGCCTGCAGACCCTGGCCTACGTGCGCGACGCCGGGATGAAAATCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGt                                                                                                                                     <  5:219643/147‑1 (MQ=255)                        cTGCAGACCCTGGCCTACGTGCGCGACGCCGGGATGAAAATCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACAt                                                                                                                         >  3:42245/1‑149 (MQ=255)                           cAGACCCTGGCCTACGTGCGCGACGCCGGGATGAAAATCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCt                                                                                                                      <  2:184357/149‑1 (MQ=255)                             gACCCTGGCCTACGTGCGCGACGCCGGGATGAAAATCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTgg                                                                                                                    <  8:40714/149‑1 (MQ=255)                               cccTGGCCTACGTGCGCGACGCCGGGATGAAAATCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGt                                                                                                                   >  2:81200/1‑148 (MQ=255)                                ccTGGCCTACGTGCGCGACGCCGGGATGAAAATCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGccaccttgaccagcatgttgatcggcaccgactccg                                                                                                                 >  5:70044‑M1/1‑113 (MQ=255)                                ccTGGCCTACGTGCGCGACGCCGGGATGAAAATCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTc                                                                                                                  >  3:264434/1‑148 (MQ=255)                                    gCCTACGTGCGCGACGCCGGGATGAAAATCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAg                                                                                                               <  1:81200/147‑1 (MQ=255)                                             cgcgACGCCGGGATGAAAATCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGccaccttgaccagcatgttgatcggcaccgactccgggtgttccggcag                                                                                                    <  6:70044‑M1/149‑50 (MQ=255)                                                   gCCGGGATGAAAATCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCgct                                                                                              <  4:213151/149‑1 (MQ=255)                                                        gATGAAAATCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCgctggct                                                                                          >  8:267392/1‑148 (MQ=255)                                                         aTGAAAATCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGa                                                                                        <  4:264434/149‑1 (MQ=255)                                                           gAAAATCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAAc                                                                                                                           >  8:94729/1‑112 (MQ=255)                                                           gAAAATCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAAc                                                                                                                           <  7:94729/112‑1 (MQ=255)                                                             aaaTCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGccaccttgaccagcatgttgatcggcaccgactccgggtgttccggca                                                                                                     <  4:18228‑M1/132‑49 (MQ=255)                                                             aaaTCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGccaccttgaccagcatgttgatcggcaccgactccgggtgttacggca                                                                                                     >  3:18228‑M1/1‑84 (MQ=255)                                                               aTCTGCTCTGGTGGCATTCTGTGCATGGGTTAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACGCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAaga                                                                                  <  8:10197/149‑1 (MQ=255)                                                                   gCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCAGGCTGAGGAAGAGGAc                                                                              >  8:124725/1‑149 (MQ=255)                                                                    ctctGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGa                                                                               <  8:123335/147‑1 (MQ=255)                                                                         gtggCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCAGGCTGAGGAAGAGGACGTCGAc                                                                        <  7:124725/149‑1 (MQ=255)                                                                         gtggCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGACGGCCTGCTGATCCAGCTGGACAACCTGCCGGAAAACCCGGACTCGGTGCCGATCAACATGCTGGTAAAGGAGCACGCCACGACGCAGGCTAAGTAACAAGACGtaac                                                                         >  5:139806/1‑145 (MQ=255)                                                                          tggCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGAcc                                                                       >  3:266772/1‑149 (MQ=255)                                                                             cATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAAc                                                                                                                           <  4:208048/94‑1 (MQ=255)                                                                             cATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAAc                                                                                                                           >  3:208048/1‑94 (MQ=255)                                                                                    ggCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGAc                                                               <  7:267392/147‑1 (MQ=255)                                                                                      cATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTa                                                           <  2:145211/149‑1 (MQ=255)                                                                                        tGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGAACGGGTCGAcgtcctc                                                         <  4:42245/149‑7 (MQ=255)                                                                                           gTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCg                                                       >  6:146366/1‑148 (MQ=255)                                                                                            tGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTa                                                     <  4:266772/149‑1 (MQ=255)                                                                                             gAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGt                                                                    >  6:285969/1‑133 (MQ=255)                                                                                             gAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGt                                                                    <  5:285969/133‑1 (MQ=255)                                                                                                          aCCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGcc                                       >  8:124364/1‑149 (MQ=255)                                                                                                           ccGCGCCGGCCGGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGccc                                      <  8:296757/149‑1 (MQ=255)                                                                                                                 cGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGc                                        >  7:50204/1‑141 (MQ=255)                                                                                                                 cGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGc                                        <  8:50204/141‑1 (MQ=255)                                                                                                                          gATACAGCTGGCCAACCTGCCTGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATCCTCATGccc                        <  6:139806/148‑1 (MQ=255)                                                                                                                           aTCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATCCTCATGccc                        <  5:146366/147‑1 (MQ=255)                                                                                                                               aGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGATGGCCGTGGCCCGGATCCTCATGCCCAAGtc                   >  6:226073/1‑148 (MQ=255)                                                                                                                               aGCTGGCCAACCTGCCGGAACACCCGGAGTCAGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGAACCTCATGCCCAActct                  >  4:142139/1‑149 (MQ=255)                                                                                                                                gCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATCCTCATGCCCAAGtct                  >  7:240721/1‑148 (MQ=255)                                                                                                                                        aCCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATCCTCATGCCCAAGTCTCACGTgcgc         <  7:124364/149‑1 (MQ=255)                                                                                                                                         ccTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATCCTCATGCCCAAGTCTCACGTGCGcc        >  4:107328/1‑149 (MQ=255)                                                                                                                                          cTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGccggcaggttggccagctggatcagcaggccggcgcggtcatccagcgattcacccatgcccagaatgccaccagagcagattttcatcccggcgtcgcg       <  6:70044‑M2/149‑101 (MQ=255)                                                                                                                                           tGCCGTAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGccggcaggttggccagctggatcagcaggccggcgcggtcatccagcgattcacccatgcccagaatgccaccagagcagattt                       >  3:18228‑M2/1‑48 (MQ=255)                                                                                                                                           tGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGccggcaggttggccagctggatcagcaggccggcgcggtcatccagcgattcacccatgcccagaatgccaccagagcagattt                       <  4:18228‑M2/132‑85 (MQ=255)                                                                                                                                              cGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATCCTCATGCCCAAGt                    <  1:199775/132‑1 (MQ=255)                                                                                                                                              cGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATCCTCATGCCCAAGt                    >  2:199775/1‑132 (MQ=255)                                                                                                                                               ggAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATCCTCATGCCCAAGTCTCACGTGCGCCTGTccg  >  7:79900/1‑149 (MQ=255)                                                                                                                                                |                                                                                                                                                    CCACGCGTACCTACAGCGAGCGCCTGCAGACCCTGGCCTACGTGCGCGACGCCGGGATGAAAATCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATCCTCATGCCCAAGTCTCACGTGCGCCTGTCCG  >  NC_002947/440574‑440864

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.