New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 440717	46 (0.930)	4 (0.090)	4/244	NT	8.3%	coding (658/1059 nt)	bioB	biotin synthase
	?	NC_002947	= 440759	45 (0.960)					coding (700/1059 nt)	bioB	biotin synthase

GCCGGGATGAAAATCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATCCTCATGCCCAAGTCTCACGTGCGCCTGTCCGCCGGCCGCGAGCAGATGAACGAGCAGATGCAGGCCCTGGCCT  >  NC_002947/440624‑440906                                                                                                                                        |                                                                                                                                                    gCCGGGATGAAAATCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCgct                                                                                                                                        <  4:213151/149‑1 (MQ=255)      gATGAAAATCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCgctggct                                                                                                                                    >  8:267392/1‑148 (MQ=255)       aTGAAAATCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGa                                                                                                                                  <  4:264434/149‑1 (MQ=255)             aTCTGCTCTGGTGGCATTCTGTGCATGGGTTAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACGCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAaga                                                                                                                            <  8:10197/149‑1 (MQ=255)                 gCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCAGGCTGAGGAAGAGGAc                                                                                                                        >  8:124725/1‑149 (MQ=255)                  ctctGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGa                                                                                                                         <  8:123335/147‑1 (MQ=255)                       gtggCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCAGGCTGAGGAAGAGGACGTCGAc                                                                                                                  <  7:124725/149‑1 (MQ=255)                       gtggCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGACGGCCTGCTGATCCAGCTGGACAACCTGCCGGAAAACCCGGACTCGGTGCCGATCAACATGCTGGTAAAGGAGCACGCCACGACGCAGGCTAAGTAACAAGACGtaac                                                                                                                   >  5:139806/1‑145 (MQ=255)                        tggCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGAcc                                                                                                                 >  3:266772/1‑149 (MQ=255)                                  ggCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGAc                                                                                                         <  7:267392/147‑1 (MQ=255)                                    cATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTa                                                                                                     <  2:145211/149‑1 (MQ=255)                                      tGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGAACGGGTCGAcgtcctc                                                                                                   <  4:42245/149‑7 (MQ=255)                                         gTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCg                                                                                                 >  6:146366/1‑148 (MQ=255)                                          tGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTa                                                                                               <  4:266772/149‑1 (MQ=255)                                           gAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGt                                                                                                              >  6:285969/1‑133 (MQ=255)                                           gAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGt                                                                                                              <  5:285969/133‑1 (MQ=255)                                                        aCCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGcc                                                                                 >  8:124364/1‑149 (MQ=255)                                                         ccGCGCCGGCCGGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGccc                                                                                <  8:296757/149‑1 (MQ=255)                                                               cGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGc                                                                                  >  7:50204/1‑141 (MQ=255)                                                               cGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGc                                                                                  <  8:50204/141‑1 (MQ=255)                                                                        gATACAGCTGGCCAACCTGCCTGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATCCTCATGccc                                                                  <  6:139806/148‑1 (MQ=255)                                                                         aTCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATCCTCATGccc                                                                  <  5:146366/147‑1 (MQ=255)                                                                             aGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGATGGCCGTGGCCCGGATCCTCATGCCCAAGtc                                                             >  6:226073/1‑148 (MQ=255)                                                                             aGCTGGCCAACCTGCCGGAACACCCGGAGTCAGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGAACCTCATGCCCAActct                                                            >  4:142139/1‑149 (MQ=255)                                                                              gCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATCCTCATGCCCAAGtct                                                            >  7:240721/1‑148 (MQ=255)                                                                                      aCCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATCCTCATGCCCAAGTCTCACGTgcgc                                                   <  7:124364/149‑1 (MQ=255)                                                                                       ccTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATCCTCATGCCCAAGTCTCACGTGCGcc                                                  >  4:107328/1‑149 (MQ=255)                                                                                        cTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGccggcaggttggccagctggatcagcaggccggcgcggtcatccagcgattcacccatgcccagaatgccaccagagcagattttcatcccggcgtcgcg                                                 <  6:70044‑M2/149‑101 (MQ=255)                                                                                         tGCCGTAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGccggcaggttggccagctggatcagcaggccggcgcggtcatccagcgattcacccatgcccagaatgccaccagagcagattt                                                                 >  3:18228‑M2/1‑48 (MQ=255)                                                                                         tGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGccggcaggttggccagctggatcagcaggccggcgcggtcatccagcgattcacccatgcccagaatgccaccagagcagattt                                                                 <  4:18228‑M2/132‑85 (MQ=255)                                                                                            cGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATCCTCATGCCCAAGt                                                              >  2:199775/1‑132 (MQ=255)                                                                                            cGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATCCTCATGCCCAAGt                                                              <  1:199775/132‑1 (MQ=255)                                                                                             ggAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATCCTCATGCCCAAGTCTCACGTGCGCCTGTccg                                            >  7:79900/1‑149 (MQ=255)                                                                                                  acCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCAGGATCCTCATGCCCAAGTCTCACGTGCGCCTGTCCgccggc                                       >  4:280631/1‑149 (MQ=255)                                                                                                    ccGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATCCTCATGCCCAAGTCTCACGTGCGCCTGTCCgccggccg                                     >  3:104502/1‑149 (MQ=255)                                                                                                     cGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGccggcaggttggccagctggatcagcaggccggcgcggtcatccagcgattcacccatgcccagaatgccaccagagcagattttcatcccggcgtcgcgcacgtaggccagg                                    >  5:70044‑M2/1‑36 (MQ=255)                                                                                                             gTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATCCTCATGCCCAAGTCTCACGTGCGCCTGTCCGCCGGCCGCGAGCAGAt                            <  3:107328/149‑1 (MQ=255)                                                                                                                  gATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATc                                                                           <  2:265405/97‑1 (MQ=255)                                                                                                                  gATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATc                                                                           >  1:265405/1‑97 (MQ=255)                                                                                                                   aTCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATCCTCATGCCCAAGTCTCACGTGCGCCTGTCCGCCGGCCGCGAGCAGATGAAc                        >  6:111819/1‑147 (MQ=255)                                                                                                                   aTCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATCCTCAAGCCCAAGTCTCACGTGCGCCTGTCCGCCGGCCGCGAGCAGATGAAc                        >  7:251364/1‑147 (MQ=255)                                                                                                                    tCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATCCTCATGCCCAAGTCTCACGTGCGCCTGTCCGCCGGCCGCGAGCAGATGAACGa                      <  5:226073/148‑1 (MQ=255)                                                                                                                       aCATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGa                                                                                                                                  >  7:274619/1‑37 (MQ=255)                                                                                                                       aCATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGa                                                                                                                                  <  8:274619/37‑1 (MQ=255)                                                                                                                             tGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATCCTCATGCCCAAGTCTCACGTGCGCCTGTCCGCCGGCCGCGAGCAGATGAACGAGCAGATGCAg            >  4:220524/1‑149 (MQ=255)                                                                                                                             tGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATCCTCATGCCCAAGTCTCACGTGCGCCTGTCCGCCGGCCACGAGCAGATGAACGAGCAGATGc              <  1:182080/147‑1 (MQ=255)                                                                                                                             tGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATCCTCATGCCCAAGTCTCACGTGCGCCTGTCCGCCGGCCACGAGCAGATGAACGAGCAGATGc              >  2:182080/1‑147 (MQ=255)                                                                                                                               gTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATCCTCATGCCCAAGTCTCACGTGCGCCTGTCCGCCGGCCGCGAGCAGATGAACGAGCAGATGCAg            <  8:240721/147‑1 (MQ=255)                                                                                                                               gTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATCCTCATGCCCAAGTCTCACGTGCGCCTGTCCGCCGGCCGCGAGCAGATGAACGAGCAGATGCAGGc          >  4:280164/1‑149 (MQ=255)                                                                                                                                        gCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATCCTCATGCCCAAGTCTCACGTGCGCCTGTCCGCCGGCCGCGAGCAGATGAACGAGCAGATGCAGGCCCTGGCCt  >  3:52651/1‑148 (MQ=255)                                                                                                                                        |                                                                                                                                                    GCCGGGATGAAAATCTGCTCTGGTGGCATTCTGGGCATGGGTGAATCGCTGGATGACCGCGCCGGCCTGCTGATCCAGCTGGCCAACCTGCCGGAACACCCGGAGTCGGTGCCGATCAACATGCTGGTCAAGGTGGCCGGCACGCCGCTGGCTGAGGAAGAGGACGTCGACCCGTTCGACTTTATCCGTATGCTGGCCGTGGCCCGGATCCTCATGCCCAAGTCTCACGTGCGCCTGTCCGCCGGCCGCGAGCAGATGAACGAGCAGATGCAGGCCCTGGCCT  >  NC_002947/440624‑440906

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.