New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	539377 =	60 (1.220)	4 (0.080)	4/246	NT	6.1%	coding (1755/4074 nt)	rpoB	DNA‑directed RNA polymerase subunit beta
	?	NC_002947	539420 =	66 (1.390)					coding (1798/4074 nt)	rpoB	DNA‑directed RNA polymerase subunit beta

CGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGACCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAAGAGGCAGATCACGTCATCGCACAGGCTTCGGCCGCGATGAACGACAAGAAGCAAC  >  NC_002947/539230‑539522                                                                                                                                                    |                                                                                                                                                  cGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGACCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCa                                                                                                                                                  <  3:203199/149‑1 (MQ=255) cGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGACCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCa                                                                                                                                                  <  7:36086/149‑1 (MQ=255)  gCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGACCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCac                                                                                                                                                 >  4:82306/1‑149 (MQ=255)            cTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGACCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTAc                                                                                                                                       <  2:19836/149‑1 (MQ=255)              ggCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGACCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCAGAACATCGCTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACgg                                                                                                                                     >  8:22690/1‑149 (MQ=255)                  gTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGACCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTc                                                                                                                                 <  8:79192/149‑1 (MQ=255)                     gaactgctaccagctcatcgatcagttgcttcttgtcgttcatcgcggccgaagcctgtgcgatgacgtgatctgcctcttcgattgccgacaggaacacgatgtcgtcgctgacaacgccttccttCac                                                                                                                                                 <  8:153589‑M1/3‑1 (MQ=255)                     gaactgctaccagctcatcgatcagttgcttcttgtcgttcatcgcggccgaagcctgtgcgatgacgtgatctgcctcttcgattgccgacaggaacacgatgtcgtcgctgacaacgccttccttCac                                                                                                                                                 >  7:153589‑M1/128‑130 (MQ=255)                       aCCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGACCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTgg                                                                                                                             >  2:314251/1‑148 (MQ=255)                          cGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGACCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAg                                                                                                                         >  3:132402/1‑149 (MQ=255)                                  tGCCGGCTTCGAAGTCCGTGACGTACACCCGACCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCac                                                                                                                                                 <  6:97986/117‑1 (MQ=255)                                  tGCCGGCTTCGAAGTCCGTGACGTACACCCGACCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCac                                                                                                                                                 >  5:97986/1‑117 (MQ=255)                                    ccGGCTTCGAAGTCCGTGACGTACACCCGACCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACcgc                                                                                                               >  7:120694/1‑149 (MQ=255)                                       gCTTCGAAGTCCGTGACGTAGACGCGACCTACTATGGGCGTGTGTGCCCGATGGAGACCCCTGAAGGGCCGAACATCGGTCTTATCAACTCCCTGGGGGCCTTTGCCCGGACCAAGCAGTACGGCTTCCTGGAAAGCCGGTACCGCgtg                                                                                                            <  5:87441/149‑1 (MQ=255)                                           cGAAGTCCGTGACGTACACCCGACCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCgtggt                                                                                                          <  8:96671/147‑1 (MQ=255)                                            gAAGTCCGTGACGTACACCCGACCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCa                                                                                                                                                  <  7:212246/106‑1 (MQ=255)                                            gAAGTCCGTGACGTACACCCGACCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCa                                                                                                                                                  >  8:212246/1‑106 (MQ=255)                                                  cGTGACGTACACCCGACCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTgaaggaag                                                                                                  <  4:132402/148‑1 (MQ=255)                                                   gTGACGTACACCCGACCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACcgc                                                                                                               >  5:142090/1‑134 (MQ=255)                                                   gTGACGTACACCCGACCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGc                                                                                                <  6:130126/149‑1 (MQ=255)                                                   gTGAAGTACACCCGACCCACTATGGCCTTTTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACAAACCAGTACGGCTTCCTGGAAAGCCCGTACcgc                                                                                                               <  6:142090/134‑1 (MQ=255)                                                      aCGTACACCCGACCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGtt                                                                                             <  4:198333/149‑1 (MQ=255)                                                       gtcgttcatcgcggccgaagcctgtgcgatgacgtgatctgcctcttcgattgccgacaggaacacgatgtcgtcgctgacaacgccttccttCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTgaag                                                                                                      <  1:61493‑M1/46‑1 (MQ=255)                                                       gtcgttcatcgcggccgaagcctgtgcgatgacgtgatctgcctcttcgattgccgacaggaacacgatgtcgtcgctgacaacgccttccttCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTgaag                                                                                                      >  2:61493‑M1/94‑139 (MQ=255)                                                       cGTACACCCGACCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTg                                                                                            <  6:121787/149‑1 (MQ=255)                                                          gttcatcgcggccgaagcctgtgcgatgacgtgatctgcctcttcgattgccgacaggaacacgatgtcgtcgctgacaacgccttccttCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCg                                                                                               >  1:146842‑M1/91‑143 (MQ=255)                                                          gttcatcgcggccgaagcctgtgcgatgacgtgatctgcctcttcgattgccgacaggaacacgatgtcgtcgctgacaacgccttccttCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCg                                                                                               <  2:146842‑M1/53‑1 (MQ=255)                                                           cacCCGACCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCa                                                                                         <  3:82306/148‑1 (MQ=255)                                                           cacCCGACCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAg                                                                                        <  4:43922/149‑1 (MQ=255)                                                             cccGACCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGc                                                                                       >  5:105262/1‑148 (MQ=255)                                                              ccGACCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGcga                                                                                     >  7:64388/1‑149 (MQ=255)                                                               cGAACCAATATGGCCGTGTGTGCCCGATCGAGACCCCTGAATGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGcgac                                                                                    <  8:143787/149‑1 (MQ=255)                                                                          ggCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGtt                                                                         >  4:254927/1‑149 (MQ=255)                                                                           gCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGGGGCCTATGCCCGCACCATCCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTc                                                                        <  1:281178/149‑1 (MQ=255)                                                                           gCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTc                                                                        >  7:221614/1‑149 (MQ=255)                                                                            ccGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTcc                                                                       >  8:104300/1‑149 (MQ=255)                                                                               tgtgtgCCCGATCGAGACCCCTGAAGGTCCGCACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCgtg                                                                                                            <  5:141289/109‑1 (MQ=255)                                                                               tgtgtgCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCgtg                                                                                                            >  6:141289/1‑109 (MQ=255)                                                                                     cccGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCaa                                                              >  1:135950/1‑149 (MQ=255)                                                                                      ccGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCgtg                                                                           >  7:271545/1‑135 (MQ=255)                                                                                      ccGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCgtg                                                                           <  8:271545/135‑1 (MQ=255)                                                                                       cGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATc                                                            >  3:285894/1‑149 (MQ=255)                                                                                            gagaCCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAag                                                        <  7:104300/148‑1 (MQ=255)                                                                                            gagaCCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAag                                                        <  4:25030/148‑1 (MQ=255)                                                                                             agaCCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAagag                                                      <  8:64388/149‑1 (MQ=255)                                                                                              gaCCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAagag                                                      <  6:105262/148‑1 (MQ=255)                                                                                              gaCCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAAGAgg                                                     <  3:254927/149‑1 (MQ=255)                                                                                               aCCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAAGAGGc                                                    <  1:314251/149‑1 (MQ=255)                                                                                                  ccTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAAGAgg                                                     >  3:310557/1‑145 (MQ=255)                                                                                                    tGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAAGAGGCAGAt                                                >  3:229361/1‑148 (MQ=255)                                                                                                    tGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAAGAGGCAGAt                                                >  4:3434/1‑148 (MQ=255)                                                                                                         gTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAAGAGGCa                                                   >  8:216302/1‑140 (MQ=255)                                                                                                         gTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAAGAGGCa                                                   <  7:216302/140‑1 (MQ=255)                                                                                                          tCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAAGAGGCAGATCACGTCa                                         >  2:7264/1‑149 (MQ=255)                                                                                                                 aTCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAAGAGGCAGATCACGTCATCGcaca                                  <  6:212775/149‑1 (MQ=255)                                                                                                                    ggTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAAGAGGCAGATCACGTCATCGCACAGGc                               <  2:135950/149‑1 (MQ=255)                                                                                                                     gTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAAGAGGCAGATCACGTCATCGCACAGGCt                              >  2:122493/1‑149 (MQ=255)                                                                                                                      tCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAaga                                                       >  6:187556/1‑123 (MQ=255)                                                                                                                      tCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAaga                                                       <  5:191988/123‑1 (MQ=255)                                                                                                                      tCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAaga                                                       <  5:187556/123‑1 (MQ=255)                                                                                                                      tCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAAGAGGCAGATCACGTCATCGCACAGGCtt                             >  4:253704/1‑149 (MQ=255)                                                                                                                         gATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAAGAGGCAGATCACGTCATCGCACAGGCTTCgg                          >  1:201944/1‑149 (MQ=255)                                                                                                                         gATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAAGAGGCAGATCACGTCATCGCACAGGCTTCgg                          >  8:119843/1‑149 (MQ=255)                                                                                                                               cTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAAGAGGCAGATCACGTCATCGCACAGGCTTCGGCCGCGa                    <  2:201944/149‑1 (MQ=255)                                                                                                                                tcacTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAAGAGGCAGATCACGTCATCGCACAGGCTTc                            >  3:196356/4‑140 (MQ=255)                                                                                                                                tCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAAGAGGCAGATCACGTCATCGCACAGGCTTc                            <  4:196356/140‑1 (MQ=255)                                                                                                                                  ccTGGCGGCCTATGACCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAAGAGGCAGATCACGTCATCGCACAGGCTTCGGCCGCGAt                   <  8:221614/147‑1 (MQ=255)                                                                                                                                   cTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAAGAGGCAGATCACGTCATCGCACAGGCTTCGGCCGCGATGaa                <  7:22690/149‑1 (MQ=255)                                                                                                                                   cTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAAGAGGCAGATCACGTCATCGCACAGGCTTCGGCCGCGATGaa                <  3:253704/149‑1 (MQ=255)                                                                                                                                      gcggcCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAAGAGGCAGATCACGTCATCGCACAGGCTTCGGCCGCGATGAAc               <  8:120694/147‑1 (MQ=255)                                                                                                                                      gcggcCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAAGAGGCAGATCACGTCATCGCACAGGCTTCGGCCGCGATGAACGa             <  4:310557/149‑1 (MQ=255)                                                                                                                                           cTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAAGAGGCAGATCACGTCATCGCACAGGCTTCGGCCGCGATGAACGACaaga        <  1:7264/149‑1 (MQ=255)                                                                                                                                              tGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAAGAGGCAGATCACGTCATCGCACAGGCTTCGGCCGCGATGAACGACaagaa       <  7:119843/147‑1 (MQ=255)                                                                                                                                                cccGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAAGAGGCAGATCACGTCATCGCACAGGCTTCGGCCGCGATGAACGACAAGAAGCaa   >  1:63228/1‑149 (MQ=255)                                                                                                                                                 ccGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAAGAGGCAGATCACGTCATCGCACAGGCTTCGGCCGCGATGAACGACAAGAAGCAAc  >  2:65320/1‑149 (MQ=255)                                                                                                                                                 ccGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCAGCAATCGAAGAGGCAGATCACGTCATCGCACAGGCTTCGGCCGCGATGAACGACAAGAAGCAAc  <  7:229763/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                  CGCACTCGGCCCTGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAAGTCCGTGACGTACACCCGACCCACTATGGCCGTGTGTGCCCGATCGAGACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGGCGGCCTATGCCCGCACCAACCAGTACGGCTTCCTGGAAAGCCCGTACCGCGTGGTGAAGGAAGGCGTTGTCAGCGACGACATCGTGTTCCTGTCGGCAATCGAAGAGGCAGATCACGTCATCGCACAGGCTTCGGCCGCGATGAACGACAAGAAGCAAC  >  NC_002947/539230‑539522

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.