New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 670925 =57 (1.150)4 (0.090) 4/242 NT 7.3% intergenic (+12/‑21) pbpC/PP_0573 peptidoglycan glycosyltransferase/hypothetical protein
?NC_002947 670972 = 47 (1.010)coding (27/1725 nt) PP_0573 hypothetical protein

ACGGCCAGCCGTTGGGTGAAACCCAGGGGCAGGACAGCTTGTTGCTGCGTTTGCCACAGGTCGGGCAGGCCGAACTCAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCATGGGAACATGGAGTGCCCTATGCGTCCTCTGGTCGTGCCCCTGATGTTGCTGCTTTGGGCACTTGCTGCCCACGCCGACCCGTTGCC  >  NC_002947/670780‑671073
                                                                                                                                                  |                                                                                                                                                    
aCGGCCAGCCGTTGGGTGAAACCCAGGGGCAGGACAGCTTGTTGCTGCGTTTGCCACAGGTCGGGCAGGCCGAACTCAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGc                                                                                                                                                   >  3:22927/1‑149 (MQ=255)
 gctgggcagacgccgctcgtattcatggctgtcgagaaaccccggcaacgggtcggcgtgggcagcaagtgcccaaagcagcaacatcaggggcacgaccagaggacgcatagggcactccatgttcccatgggttgcggggcacCAGc                                                                                                                                                   <  8:69780‑M1/4‑1 (MQ=255)
  ctgggcagacggcggtcgtattcatggctgtcgagtaacgccggccacgggtcggtgtgggcatcaagtgcccaaagcagcaacatcaggggcacgacaagatgacgcatagggcactcgatgttcccttggttttcgggtcacCAGcc                                                                                                                                                  >  8:288678‑M1/145‑149 (MQ=255)
          gTTGGGTGAAACCCAGGGGCAGGACAGCTTGTTGCTGCGTTTGCCACAGGTCGGGCAGGCCGAACTCAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCgg                                                                                                                                                >  6:177823/1‑142 (MQ=255)
          gTTGGGTGAAACCCAGGGGCAGGACAGCTTGTTGCTGCGTTTGCCACAGGTCGGGCAGGCCGAACTCAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCgg                                                                                                                                                <  5:177823/142‑1 (MQ=255)
               gTGAAACCCAGGGGCAGGACAGCTTGTTGCTGCGTTTGCCACAGGTCGGGCAGGCCGAAGCTCAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTAGACGACAGCCGGGCCAGCACCTa                                                                                                                                     >  1:90538/1‑149 (MQ=255)
                 gAAACCCAGGGGCAGGACAGCTTGTTGCTGCGTTTGCCACAGGTCGGGCAGGCCGAACTCAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGc                                                                                                                                  >  6:160527/1‑149 (MQ=255)
                   aaCCCAGGGGCAGGACAGCTTGTTGCTGCGTTTGCCACAGGTCGGGCAGGCCGAACTCAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCtt                                                                                                                                <  8:202245/149‑1 (MQ=255)
                   aaCCCAGGGGCAGGACAGCTTGTTGCTGCGTTTGCCACAGGTCGGGCAGGCCGAACTCAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCtt                                                                                                                                >  3:88333/1‑149 (MQ=255)
                      ccAGGGGCAGGACAGCTTGTTGCTGCGTTTGCCACAGGTCGGGCAGGCCGAACTCAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGc                                                                                                                              >  6:234481/1‑148 (MQ=255)
                      ccAGGGGCAGGACAGCTTGTTGCTGCGTTTGCCACAGGTCGGGCAGGCCGAACTCAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGc                                                                                                                              >  1:97483/1‑148 (MQ=255)
                                gACAGCTTGTTGCTGCGTTTGCCACAGGTCGGGCAGGCCGAACTCAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGgt                                                                                                                   <  1:281939/149‑1 (MQ=255)
                                  cAGCTTGTTGCTGCGTTTGCCACAGGTCGGGCAGGCCGAACTCAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGgtgt                                                                                                                 <  2:136053/149‑1 (MQ=255)
                                   aGCTTGTTGCTGCGTTTGCCACAGGTCGGGCAGGCCGAACTCAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGgtgt                                                                                                                 >  2:288056/1‑148 (MQ=255)
                                   aGCTTGTTGCTGCGTTTGCCACAGGTCGGGCAGGCCGAACTCAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGtgtg                                                                                                                <  6:178803/149‑1 (MQ=255)
                                      acccccggcaacgggtcggcgtgggcagcaagtgcccaaagcagcaacatcaggggcacgaccagacgacgcatagggcactccatgttcccatgggttgcggggcacCAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGAc                                                                                                              >  4:143227‑M1/109‑149 (MQ=255)
                                         ttgCTGCGTTTGCCACAGGTCGGGCAGGCCGAACTCAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCgg                                                                                                           <  5:234481/148‑1 (MQ=255)
                                            ggcaacgggtcggcgtgggcagcaagtgcccaaagcagccacatccggggctcgaccagaggacgcatagggcactccatgttcccatgggttgcggggcacCAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTg                                                                                                        >  2:288973‑M1/103‑149 (MQ=255)
                                            ctgcGTTTGCCACAGGTCGGGCAGGCCGAACTCAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTgg                                                                                                       >  4:8325/1‑149 (MQ=255)
                                            ctgcGTTTGCCACAGGTCGGGCAGGCCGAACTCAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTg                                                                                                        <  2:232560/148‑1 (MQ=255)
                                             gcaacgggtcggcgtgggcagcaagtgcccaaagcagcaacatcaggggcacgaccagaggacgcataggccactccatgttcccatgggttgcggggcacCAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTgg                                                                                                       >  7:205415‑M1/102‑149 (MQ=255)
                                                acgggttcgcggtggcaccaagttcccaaatcagcaacatcaggggcacgaccagaggacgcatagggcactccatggtcccatgggttgcggggcacCAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGc                                                                                                    >  8:120431‑M1/99‑149 (MQ=255)
                                                     ccACAGGTCGGGCAGGCCGAACTCAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTa                                                                                                                                     <  2:284521/110‑1 (MQ=255)
                                                     ccACAGGTCGGGCAGGCCGAACTCAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTa                                                                                                                                     >  1:284521/1‑110 (MQ=255)
                                                      cacaGGTCGGGCAGGCCGAACTCAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCaa                                                                                             <  2:97483/149‑1 (MQ=255)
                                                             cGGGCCGGCCGAACGCAGCGCGGTGGACGAACGCGGTCAGCCGGCGCGGGTGGGGTTCCCGGGCAGTGCGTCGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGGGCCGGGTGTGACGGGCTGGTGCCCCGCAACCCATgg                                                                                      <  4:95682/149‑1 (MQ=255)
                                                              gggCAGGCCGAACTCAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCATgg                                                                                      <  4:88333/148‑1 (MQ=255)
                                                              gggCAGGCCGAACTCAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCATgg                                                                                      <  8:262093/148‑1 (MQ=255)
                                                              gggCAGGCCGAACTCAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCATgg                                                                                      <  4:22927/148‑1 (MQ=255)
                                                              gggCAGGCCGAACTCAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCATgg                                                                                      <  2:90538/148‑1 (MQ=255)
                                                                gCAGGCCGAACTCAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCa                                                                                         >  4:40844/1‑143 (MQ=255)
                                                                gCAGGCCGAACTCAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCa                                                                                         <  3:40844/143‑1 (MQ=255)
                                                                   ggCCGAACTCAGCGCGGTGGACGAAAGCGGTCAGACGGCGCGGGTTGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCATGGGAACAt                                                                                <  1:288056/149‑1 (MQ=255)
                                                                     ccGAACTCAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCATGGGAACATg                                                                               >  8:195234/1‑148 (MQ=255)
                                                                     ccGAACTAAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCAAGACCATACGCTTGCAAGTGAAGGGTGTGACCGGCAGGTGCCACGCAACCCATGGGAACATg                                                                               >  7:199780/1‑148 (MQ=255)
                                                                       gAACTCAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGt                                                                                                      <  7:44361/123‑1 (MQ=255)
                                                                       gAACTCAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGt                                                                                                      >  8:44361/1‑123 (MQ=255)
                                                                            tCAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTGAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAAGCCTTGGGAACATGGAGTGcc                                                                        >  4:3215/1‑149 (MQ=255)
                                                                              aGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCATGGGAACATGGAGTGccc                                                                       >  2:120284/1‑148 (MQ=255)
                                                                              aGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCATGGGAACATGGAGTGccc                                                                       >  3:22560/1‑148 (MQ=255)
                                                                                cgcgcTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTTTGACCGGCTGGTGCCCCGCAACCCATGGGAACATGGAGTGCCCTAt                                                                    <  1:70798/149‑1 (MQ=255)
                                                                                     tGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCAt                                                                                        >  4:224565/1‑124 (MQ=255)
                                                                                     tGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCATGGGAACATGGAGTGCCCTATGCGTc                                                               >  6:294023/1‑149 (MQ=255)
                                                                                       gACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTgg                                                                                                       <  4:121704/107‑1 (MQ=255)
                                                                                       gACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCATGGGAACATGGAGTGCCCTATGCGTc                                                               <  6:281622/147‑1 (MQ=255)
                                                                                               cGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCATGGGAACATGGa                                                                             <  8:180821/125‑1 (MQ=255)
                                                                                               cGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCATGGGAACATGGa                                                                             >  7:180821/1‑125 (MQ=255)
                                                                                               cGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCATGGGAACATGGAGTGCCCTATGCGTCCTCTGGTCGt                                                     >  5:151347/1‑149 (MQ=255)
                                                                                                   cAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCATGGGAACATGGAGTGCCCTATGCGTCCTCTGGTCGTGccc                                                 <  3:8325/149‑1 (MQ=255)
                                                                                                     gACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGgt                                                                                                                   >  3:98071/1‑81 (MQ=255)
                                                                                                     gACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGgt                                                                                                                   <  4:98071/81‑1 (MQ=255)
                                                                                                         gctcgtgTGGCGGTCCCGGTCAGTGAGTAGGTGATCGACGACAGCCGGTCCAGCACCTACGCTTGCTAGTGACGCGTGTGACCGGCTGGTGCCCCGCAACCCCTTGGAACATGGAGTGCCCTATGCGTCCTCTGGTCGTGCCCatgatg                                           <  8:199780/143‑1 (MQ=255)
                                                                                                          cgcgGGTGGCGTTCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCATGGGAACATGGAGTGCCCTATGCGTCCTCTGGTCGTGCCCCTGATGtt                                         >  1:219762/1‑149 (MQ=255)
                                                                                                             gggTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCATGGGAACATGGAGTGCCCTATGCGTCCTCTGGTCGTGCCCCTGATGTtg                                        <  4:307523/148‑1 (MQ=255)
                                                                                                             gggTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCATGGGAACATGGAGTGCCCTATGCGTCCTCTGGTCGTGCCCCTGATGTtg                                        >  3:307523/1‑148 (MQ=255)
                                                                                                                        cAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCATGGGAACATGGAGTGCCCTATGCGTCCTCTGGTCGTGCCCCTGATGTTGCTGCttt                                 >  6:29777/1‑144 (MQ=255)
                                                                                                                        cAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCATGGGAACATGGAGTGCCCTATGCGTCCTCTGGTCGTGCCCCTGATGTTGCTGCttt                                 <  5:29777/144‑1 (MQ=255)
                                                                                                                           gTCAGTGAGTAGGTGTTCGACGACAGCCGGACCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCATGGGAACATGGAGTGCCCTATGCGTCCTCTGGTCGTGCCCCTGATGTTGCTGCTTTGGGCACtt                         >  1:27369/1‑149 (MQ=255)
                                                                                                                                   gTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCATGGGAACATGGAGTGCCCTATGCGTCCTCTGGTCGTGCCCCTGATGTTGCTGCTTTGGGCACTtgctgc                    >  6:147056/1‑146 (MQ=255)
                                                                                                                                   gTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCATGGGAACATGGAGTGCCCTATGCGTCCTCTGGTCGTGCCCCTGATGTTGCTGCTTTGGGCACTtgctgc                    <  5:147056/146‑1 (MQ=255)
                                                                                                                                    tAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCATGGGAACATGGAGTGCCCTATGCGTCCTCTGGTCGTGCCCCTGATGTTGCTGCTTTGGGCACTTGCTGCCCAc                >  6:111346/1‑149 (MQ=255)
                                                                                                                                        tgtTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCATGGGAACATGGAGTGCCCTATGCGTCCTCTGGTCGTGCCCCTGATGTTGCTGCTTTGGGCACTTGCTGCCCACGcc             >  6:80850/1‑148 (MQ=255)
                                                                                                                                        tgtTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCATGGGAACATGGAGTGCCCTATGCGTCCTCTGGTCGTGCCCCTGATGTTGCTGCTTTGGGCACTTGCTGCCCACGcc             >  3:93235/1‑148 (MQ=255)
                                                                                                                                          ttCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCATGGGAACATGGAGTGCCCTATGCGTCCTCTGGTCGTGCCCCTGATGTTGCTGCTTTGGGCACTTGCTGCCCACGCCGAc          <  5:80850/149‑1 (MQ=255)
                                                                                                                                             gacgacAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCATGGGAACATGGAGTGCCCTATGCGTCCTCTGGTCGTGCCCCTGATGTTGCTGCTTTGGGCACTTGCTGCCCACGCCGACCCg       >  5:181171/1‑149 (MQ=255)
                                                                                                                                                gacAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCATGGGAACATGGAGTGCCCTATGCGTCCTCTGGTCGTGCCCCTGATGTTGCTGCTTTGGGCACTTGCTGCCCACGCCGACCCGTTg    >  7:69780/1‑149 (MQ=255)
                                                                                                                                                  CAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCATGGGAACATGGAGTGCCCTATGCGTCCTCTGGTCGTGCCCCTGATGTTGCTGCTTTGGGCACTTGCTGCCCACGCCGACCCGTTGcc  >  2:219762‑M1/1‑149 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
ACGGCCAGCCGTTGGGTGAAACCCAGGGGCAGGACAGCTTGTTGCTGCGTTTGCCACAGGTCGGGCAGGCCGAACTCAGCGCGCTGGACGAAAGCGGTCAGACGGCGCGGGTGGCGTTCCAGGTCAGTGAGTAGGTGTTCGACGACAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCATGGGAACATGGAGTGCCCTATGCGTCCTCTGGTCGTGCCCCTGATGTTGCTGCTTTGGGCACTTGCTGCCCACGCCGACCCGTTGCC  >  NC_002947/670780‑671073

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.