New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1195712	47 (0.950)	3 (0.060)	3/250	NT	5.6%	coding (202/426 nt)	xcpP	type II secretion pathway protein XcpP
	?	NC_002947	= 1195767	55 (1.140)					coding (257/426 nt)	xcpP	type II secretion pathway protein XcpP

TTTCTGCGCAGTGTGTGCTGCAGTTGAGCCGGCAGCCACACCCGGCCACGGCGCCTGCGGTGGCCGACAGCCCGCTGCCCGGGCTGATGGTTGGTCACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTT  >  NC_002947/1195566‑1195860                                                                                                                                                   |                                                                                                                                                     tttCTGCGCAGTGTGTGCTGCAGTTGAGCCGGCAGCCACACCCGGCCAGGGCGCCTGGGGGGGCCGACAGCCCGCGGCCCGGGCTGATGGTTGGTCACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTg                                                                                                                                                    <  5:54098/149‑1 (MQ=255)           gtgtgtGCTGCAGTTGAGCCGGCAGCCACACCCGGCCACGGCGCCTGCGGTGGCCGACAGCCCGCTGCCCGGGCTGATGGTTGGTCACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTcg                                                                                                                                          <  8:238586/149‑1 (MQ=255)             gtgtgCTGCAGTTGAGCCGGCAGCCACACCCGGCCACGGCGCCTGCGGTGGCCGACAGCCCGCTGCCCGGGCTGATGGTTGGTCACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTcggc                                                                                                                                        <  6:87092/149‑1 (MQ=255)                 gctgcAGTTGAGCCGGCAGCCACACCCGGCCACGGCGCCTGCGGTGGCCGACAGCCCGCTGCCCGGGCTGATGGTTGGTCACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGcc                                                                                                                                    >  7:34594/1‑149 (MQ=255)                 gctgcAGTTGAGCCGGCAGCCACACCCGGCCACGGCGCCTGCGGTGGCCGACAGCCCGCTGCCCGGGCTGATGGTTGGTCACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGcc                                                                                                                                    >  7:29696/1‑149 (MQ=255)                   tgcAGTTGAGCCGGCAGCCACACCCGGCCACGGCGCCTGCGGTGGCCGACAGCCCGCTGCCCGGGCTGATGGTTGGTCACTGGCAGGCGCCGCCCGACGACGGCGCCCTCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCt                                                                                                                                   >  1:143010/1‑148 (MQ=255)                   tgcAGTTGAGCCGGCAGCCACACCCGGCCACGGCGCCTGCGGTGGCCGACAGCCCGCTGCCCGGGCTGATGGTTGGTCACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCt                                                                                                                                   >  1:16232/1‑148 (MQ=255)                    gcAGTTGAGCCGGCAGCCACACCCGGCCACGGCGCCTGCGGTGGCCGACAGCCCGCTGCCCGGGCTGATGGTTGGTCACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCTc                                                                                                                                  >  2:199286/1‑148 (MQ=255)                            gCCGGCAGCCACACCCGGCCACGGCGCCTGCGGTGGCCGACAGCCCGCTGCCCGGGCTGATGGTTGGTCACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAg                                                                                                                         >  6:184109/1‑149 (MQ=255)                                  aGCCACACCCGGCCACGGCGCCTGCGGTGGCCGACAGCCCGCTGCCCGGGCTGATGGTTGGTCACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTg                                                                                                                   <  1:199286/149‑1 (MQ=255)                                    ccACACCCGGCCACGGCGCCTGCGGTGGCCGACAGCCCGCTGCCCGGGCTGATGGTTGGTCACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGgc                                                                                                                 >  1:2657/1‑149 (MQ=255)                                    ccACACCCGGCCACGGCGCCTGCGGTGGCCGACAGCCCGCTGCCCGGGCTGATGGTTGGTCACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGgc                                                                                                                 <  2:16232/149‑1 (MQ=255)                                     cacaCCCGGCCACGGCGCCTGCGGTGGCCGACAGCCCGCTGCCCGGGCTGATGGTTGGTCACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCagcaccaccacactggcggccaatggctgggccttgag                                                                                                                >  5:66720‑M1/1‑111 (MQ=255)                                          ccGGCCACGGCGCCTGCGGTGGCCGACAGCCCGCTGCCCGGGCTGATGGTTGGTCACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAg                                                                                                           >  8:171508/1‑149 (MQ=255)                                                aCGGCGCCTGCGGTGGCCGACAGCCCGCTGCCCGGGCTGATGGTTGGTCACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTgtggt                                                                                                     <  2:2657/149‑1 (MQ=255)                                                       cTGCGGTGGCCGACAGCCCGCTGCCCGGGCTGATGGTTGGTCACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTg                                                                                              >  8:34594‑M2/1‑148 (MQ=255)                                                       cTGCGGTGGCCGACAGCCCGCTGCCCGGGCTGATGGTTGGTCACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTg                                                                                              >  8:29696‑M2/1‑148 (MQ=255)                                                          cGGTGGCCGACAGCCCGCTGCCCGGGCTGATGGTTGGTCACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCagcaccaccacactggcggccaatggctgggccttgaggccgccgaggtattgcagcgg                                                                                           <  6:66720‑M1/149‑60 (MQ=255)                                                            gTGGCCGACAGCCCGCTGCCCGGTCTGATGGTTGGGCACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCagcaccaccacactggcggccaatggctgggccttgaggccgccgaggtattgcagcggca                                                                                         <  4:191829‑M1/149‑62 (MQ=255)                                                             tGGCCGACAGCCCGCTGCCCGGGCTGATGGTTGGTCACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTAc                                                                                        <  5:294352/149‑1 (MQ=255)                                                               gCCGACAGCCCGCTGCCCGGGCTGATGGTTGGTCACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACg                                                                                       <  7:171508/148‑1 (MQ=255)                                                                ccGACAGCCCGCTGCCCGGGCTGATGGTTGGTCACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGc                                                                                     >  5:43233/1‑149 (MQ=255)                                                                  gACAGCCCGCTGCCCGGGCTGATGGTTGGTCACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGc                                                                                     >  4:23984/1‑147 (MQ=255)                                                                       cccGCTGCCCGGGCTGATGGTTGGTCACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAg                                                                              >  7:74143/1‑149 (MQ=255)                                                                             gCCCGGGCTGATGGTTGGTCACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCa                                                                        >  7:180243/1‑149 (MQ=255)                                                                                       aTGGTTGGTCACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGccc                                                               <  2:143010/148‑1 (MQ=255)                                                                                        tggttggtCACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCcgc                                                             <  8:74143/149‑1 (MQ=255)                                                                                             ggtCACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGt                                                          >  4:63215/1‑147 (MQ=255)                                                                                               tCACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCACTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAgc                                                      >  7:101623/1‑149 (MQ=255)                                                                                                cACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCcgcg                                                            >  8:285338/1‑142 (MQ=255)                                                                                                cACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCcgcg                                                            <  7:285338/142‑1 (MQ=255)                                                                                                 aCTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAgcgc                                                    >  8:203025/1‑149 (MQ=255)                                                                                                  cTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGcc                                                   >  5:165495/1‑149 (MQ=255)                                                                                                     gCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTgg                                                >  1:278651/1‑149 (MQ=255)                                                                                                          cgccgcCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGgcgc                                             >  8:115161/1‑147 (MQ=255)                                                                                                           gccgccCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAg                                          <  7:203025/149‑1 (MQ=255)                                                                                                           gccgccCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAg                                          <  7:115161/149‑1 (MQ=255)                                                                                                                ccGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATc                                     <  2:278651/149‑1 (MQ=255)                                                                                                                   acgacgGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGtg                                  >  4:294126/1‑149 (MQ=255)                                                                                                                             catcaccatcacTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCg                                    >  6:133339/1‑137 (MQ=255)                                                                                                                             catcaccatcacTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCg                                    <  5:133339/137‑1 (MQ=255)                                                                                                                             catcaccatcacTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACa                        >  6:59427/1‑149 (MQ=255)                                                                                                                             catcaccatcacTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGAGCCTGGCGCCAGGGATCGTGCTGCAGGACa                        <  5:184109/149‑1 (MQ=255)                                                                                                                                 accatcacTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGa                    >  4:222905/1‑149 (MQ=255)                                                                                                                                 accatcacTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGa                    >  8:250290/1‑149 (MQ=255)                                                                                                                                 accatcacTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGa                    <  3:63215/149‑1 (MQ=255)                                                                                                                                   catcacTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGa                    >  1:76753/1‑147 (MQ=255)                                                                                                                                   catcacTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGa                    >  5:38215/1‑147 (MQ=255)                                                                                                                                     tcacTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGc                <  6:43233/149‑1 (MQ=255)                                                                                                                                         tCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATc                      >  7:248088/1‑139 (MQ=255)                                                                                                                                         tCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATc                      <  8:248088/139‑1 (MQ=255)                                                                                                                                           gTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGc          >  4:19792/1‑149 (MQ=255)                                                                                                                                            tCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGcc         <  2:76753/149‑1 (MQ=255)                                                                                                                                              tGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTgcggcagacgagtgatggtgatggcgccgtcgtcgggcggcgcctgccagtgcccaaccatcagaccgggcagcgggctgtcggccac       <  4:191829‑M2/149‑89 (MQ=255)                                                                                                                                                ccGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTgcggcagacgagtgatggtgatggcgccgtcgtcgggcggcgcctgccagtgaccaaccatcagcccgggcagcgggctgtcggccaccg     <  6:66720‑M2/149‑91 (MQ=255)                                                                                                                                                ccGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGtgctgc                              >  2:108699/1‑124 (MQ=255)                                                                                                                                                 cGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGAtt    >  7:205354/1‑149 (MQ=255)                                                                                                                                                  gCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGc          <  4:214332/142‑1 (MQ=255)                                                                                                                                                  gCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGc          >  3:214332/1‑142 (MQ=255)                                                                                                                                                  gCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGAttt   >  5:83027/1‑149 (MQ=255)                                                                                                                                                   cagcaccaccacactggcggccaatggctgggccttgaggccgccgaggtattgcagcggcagacgagtgatggtgatggcgccgtcgtcgggcggcgcctgccagtgaccaaccatcagcccgggcagcgggctgtcggccaccgcag  >  8:29696‑M1/1‑1 (MQ=255)                                                                                                                                                   cagcaccaccacactggcggccaatggctgggccttgaggccgccgaggtattgcagcggcagacgagtgatggtgatggcgccgtcgtcgggcggcgcctgccagtgaccaaccatcagcccgggcagcgggctgtcggccaccgcag  >  8:34594‑M1/1‑1 (MQ=255)                                                                                                                                                   cTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGAtttt  <  3:294126/149‑1 (MQ=255)                                                                                                                                                   cTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGAtttt  <  3:23984/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                     TTTCTGCGCAGTGTGTGCTGCAGTTGAGCCGGCAGCCACACCCGGCCACGGCGCCTGCGGTGGCCGACAGCCCGCTGCCCGGGCTGATGGTTGGTCACTGGCAGGCGCCGCCCGACGACGGCGCCATCACCATCACTCGTCTGCCGCTGCAATACCTCGGCGGCCTCAAGGCCCAGCCATTGGCCGCCAGTGTGGTGGTGCTGCGCTACGGCGAGCAAGTGCGCACCCTGGCCCGCGGTCAGCGCCTGGCGCCAGGGATCGTGCTGCAGGACATCGACAGCGATGGCCTGATTTT  >  NC_002947/1195566‑1195860

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.