New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1569744 =	41 (0.830)	8 (0.180)	7/236	NT	17.4%	coding (555/1203 nt)	pcaF‑I	beta‑ketoadipyl‑CoA thiolase
	?	NC_002947	1569779 =	38 (0.840)					coding (590/1203 nt)	pcaF‑I	beta‑ketoadipyl‑CoA thiolase

CAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGGTGCGTATCGCTCACAAGAAGGGCGAAATCATCGTCGAACGTGACGAACACCTGCGCCCGGAAACCACGCTGGAGGCGCTGA  >  NC_002947/1569597‑1569892                                                                                                                                                    |                                                                                                                                                     cAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGccc                                                                                                                                                     <  1:23623/149‑1 (MQ=255)  aaCATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCt                                                                                                                                                    >  7:179003/1‑149 (MQ=255)    cATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGATGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTgc                                                                                                                                                  <  1:259160/149‑1 (MQ=255)    cATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTgc                                                                                                                                                  <  5:206055/149‑1 (MQ=255)     aTGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTgcg                                                                                                                                                 >  1:17503/1‑149 (MQ=255)       gAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTgcg                                                                                                                                                 >  6:12759/1‑147 (MQ=255)        cgggccgttgaccggtttgagcttggtcagcgcctccagcgtggtttccgggcgcaggtgttcgtcacgttcgacgatgatttcgcccttcttgtgagcgatacgcaccggcacgatttcttcggcaaagaagccggcagCCTGCGcag                                                                                                                                              <  1:80999‑M1/9‑1 (MQ=255)         aGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGcagc                                                                                                                                             >  7:164896/1‑149 (MQ=255)                    accaccATTGGCTGGCATTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGc                                                                                                                                  >  2:306874/1‑149 (MQ=255)                      caccaTTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTg                                                                                                                                >  7:54599/1‑149 (MQ=255)                      caccaTTGGCTGGCGTTTCATCAAACCGCTGATGAAGAGCCAGTAGGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATAAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTg                                                                                                                                >  1:223593/1‑149 (MQ=255)                         caTTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCg                                                                                                                             >  3:3374/1‑149 (MQ=255)                             cttggtcagcgcctccagcgtggtttccgggcgcaggtgttcgtcacgttcgacgatgatttcgcccttcttgtgagcgataggcaccggcacgatttcttcggcaaagaagccggcagc                                                                                                                                                      >  6:187899‑M1/120‑120 (MQ=255)                             cttggtcagcgcctccagcgtggtttccgggcgcaggtgttcgtcacgttcgacgatgatttcgcccttcttgtgagcgataggcaccggcacgatttcttcggcaaagaagccggcagc                                                                                                                                                      <  5:187899‑M1/1‑1 (MQ=255)                                gtcagcgcctccagcgtggtttccgggcgcaggtgttcgtcacggttcgacgatgatttcgcccttcttgtgagcgatacgcaccggcacgatttcttcggcaaagaagccggcagCCTGCGCAGCCAGCAGAAGGCTGCCg                                                                                                                             <  1:220678‑M1/26‑1 (MQ=255)                                 gtcagcgcctccagcgtggtttccgggcgcaggtgttcgtcacgttcgacgatgatttcgcccttcttgtgagcgatacgcaccggcacgatttcttcggcaaagaagccggcagCCTGCGCAGCCAGCAGAAGGCTGCCg                                                                                                                             >  2:220678‑M1/116‑141 (MQ=255)                                  gcGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCa                                                                                                                      <  2:224579/147‑1 (MQ=255)                                    tcttCATCAGCGGGTTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCt                                                                                                                  >  6:18996/3‑149 (MQ=255)                                     gcgcctccagcgtggtttccgggcgcaggtgttcgtcacgttcgacgatgatttcgcccttcttgtgagcgatacgcaccggcacgatttcttcggcaaagaagccggcagCCTGCGCAGCCAGCAGCAGGCTGCCGCTGCGCAGGCTg                                                                                                                 <  3:95824‑M1/38‑1 (MQ=255)                                          tcaACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGAGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGc                                                                                                            >  3:13246/1‑149 (MQ=255)                                              gcgtggtttccgggcgcaggtgttcgtcacgttcgacgatgatttcgcccttcttgtgagcgatacgcaccggcacgatttcttcggcaaagaagccggcagCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCa                                                                                                                      <  4:171464‑M1/33‑1 (MQ=255)                                              gcgtggtttccgggcgcaggtgttcgtcacgttcgacgatgatttcgcccttcttgtgagcgatacgcaccggcacgatttcttcggcaaagaagccggcagCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCa                                                                                                                      >  3:171464‑M1/103‑135 (MQ=255)                                               ccGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGctt                                                                                                          >  6:20610/1‑146 (MQ=255)                                               ccGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGctt                                                                                                          <  5:20610/146‑1 (MQ=255)                                                cGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCttt                                                                                                      <  2:108787/149‑1 (MQ=255)                                                     atgaAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCga                                                                                                 <  5:12759/149‑1 (MQ=255)                                                      tgaAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCgaa                                                                                                <  7:232898/149‑1 (MQ=255)                                                         agagCCTGTACGGTGGGGATTCCTTGCCGGAAACCGCCGACAACGTGGCCGAGGACTTTCTGGTTTGGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGACGGCGGCCGCGGCGCTGGCTGCCGGCTTCTTTGCCgaagaa                                                                                             <  4:3374/149‑1 (MQ=255)                                                          ggcgatggtgttcgtcacgttcgacgatgatttcgcccttctggtgagctatacccaccgccaccatttctgcggcaaagacgccggcagCCTGCGCAGCCAGCAGAAGGCGGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGaaa                                                                                            >  4:95824‑M1/91‑149 (MQ=255)                                                             ccAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCg                                                                                         >  2:80999/1‑149 (MQ=255)                                                               aGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTg                                                                                       >  6:192523/1‑149 (MQ=255)                                                                gTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGc                                                                                      <  7:236576/149‑1 (MQ=255)                                                                      tgtgGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGGTGc                                                                                <  5:18996/149‑1 (MQ=255)                                                                      tgtgGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGGTGc                                                                                <  8:179003/149‑1 (MQ=255)                                                                           aTTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGGTGCGTATc                                                                           <  8:164896/149‑1 (MQ=255)                                                                               cATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGGTGCGTATCGCTc                                                                       <  8:54599/149‑1 (MQ=255)                                                                                aTGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGGTGCGTATCGCTca                                                                      <  2:223593/149‑1 (MQ=255)                                                                                       aaaCCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGGTGCGTATCGCTCACaagaag                                                               <  5:192523/149‑1 (MQ=255)                                                                                        tttcgcccttcttgtgagcgatacgcaccggcacgatttcttcggcaaagaagccggcagCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCa                                                                                                                      >  4:207595‑M1/61‑93 (MQ=255)                                                                                        tttcgcccttcttgtgagcgatacgcaccggcacgatttcttcggcaaagaagccggcagCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCa                                                                                                                      <  3:207595‑M1/33‑1 (MQ=255)                                                                                          ccgccgACACCGTGGCCGACGAGTTTCAGGTTTCGCGTGCTGATCAGGCCGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGGTGCGTATCGGTCACAAGAAGGGc                                                            <  8:4722/149‑1 (MQ=255)                                                                                           cgccgACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGcc                                                                                                                                                      <  3:163329/58‑1 (MQ=255)                                                                                              cgACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGGTGCGTATCGCTCACAAGAAGGGCGaaa                                                        <  1:306874/149‑1 (MQ=255)                                                                                                   aCGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGGTGCGTATCGCTCACAAGAAGGGCGAAatcatc                                                   <  1:227968/149‑1 (MQ=255)                                                                                                                 tATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGGTGCGTATCGCTCACAAGAAGGGCGAAATCATCGTCGAACGTGACg                                      >  7:234668/1‑148 (MQ=255)                                                                                                                   tCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGGTGCGTATCGCTCACAAGAAGGGCGAAATCATCGTCGAACGTGACGaa                                    >  1:184959/1‑148 (MQ=255)                                                                                                                   tCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGGTGCGTATCGCTCACAAGAAGGGCGAAATCATCGTCGAACGTGACGaa                                    >  2:207383/1‑148 (MQ=255)                                                                                                                     aGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGGTGCGTATCGCTCACAAGAAGGGCGAAATCATCGTCGAACGTGACGAacac                                 <  2:184959/149‑1 (MQ=255)                                                                                                                       gTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCttt                                                                                                      <  7:113512/78‑1 (MQ=255)                                                                                                                       gTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCttt                                                                                                      >  8:113512/1‑78 (MQ=255)                                                                                                                              gagCTGATCAGGTCGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGATGCGTATCGCTCACAAGAAGGGCGAAATCATCGTCGAACGTGACGAACACCTGCGCCCg                        <  4:13246/147‑1 (MQ=255)                                                                                                                                  tGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGGTGCGTATCGCTCACAAGAAGGGCGAAATCATCGTCGAACGTGACGAACACCTGCGCCCGGaaa                    >  2:159046/1‑149 (MQ=255)                                                                                                                                       aGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGGt                                                                                  >  4:6173/1‑82 (MQ=255)                                                                                                                                       aGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGGt                                                                                  <  3:6173/82‑1 (MQ=255)                                                                                                                                              tttCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGGTGCGTATCGCTCACAAGAAGGGCGAAATCATCGTCGAACGTGACGAACACCTGCGCCCGGAAAc                   <  7:173869/138‑1 (MQ=255)                                                                                                                                              tttCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGGTGCGTATCGCTCACAAGAAGGGCGAAATCATCGTCGAACGTGACGAACACCTGCGCCCGGAAAc                   >  8:173869/1‑138 (MQ=255)                                                                                                                                              tttCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGGTGCGTATCGCTCACAAGAAGGGCGAAATCATCGTCGAACGTGACGAACACCTGCGCCCGGAAACCACGCTGGAgg        >  3:41999/1‑149 (MQ=255)                                                                                                                                               ttCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGGTGCGTATCGCTCACAAGAAGGGCGAAATCATCGTCGAACGTGACGAACACCTGCGCCCGGAAACCACGCTGGAGgc       >  4:224864/1‑149 (MQ=255)                                                                                                                                                tCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGGTGCGTATCGCTCACAAGAAGGGCGAAATCATCGTCGAACGTGACGAACACCTGCGCCCGGAAACCACGCTGGAgg        <  1:207383/147‑1 (MQ=255)                                                                                                                                                  gCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGGTGCGTATCGCTCACAAGAAGGGCGAAATCATCGTCGAACGTGACGAACACCTGCGCCCGGAAACCACGCTGGAGgcgc     <  8:234668/148‑1 (MQ=255)                                                                                                                                                    CCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGGTGCGTATCGCTCACAAGAAGGGCGAAATCATCGTCGAACGTGACGAACACCTGCGCCCGGAAACCGCGCTGGAGGCGCTGa  <  6:148005‑M1/149‑1 (MQ=255)                                                                                                                                                    CCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGGTGCGTATCGCTCACAAGAAGGGCGAAATCATCGTCGAACGTGACGAACACCTGCGCCCGGAAACCACGCTGGAGGCGCTGa  >  3:224864‑M1/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                     CAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGGTGCGTATCGCTCACAAGAAGGGCGAAATCATCGTCGAACGTGACGAACACCTGCGCCCGGAAACCACGCTGGAGGCGCTGA  >  NC_002947/1569597‑1569892

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.