New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3289797 | 39 (0.790) | 4 (0.090) | 4/242 | NT | 9.3% | coding (829/1752 nt) | PP_2892 | hypothetical protein |
? | NC_002947 | = 3289831 | 41 (0.880) | coding (863/1752 nt) | PP_2892 | hypothetical protein |
GTCGCAGAGCTGAACAACGACCTGCAATCGAGCGGCTATTTCGAAGGCGTGCGCGTGGATGCGGCGCCCACTGCTGCTGTGGGCGAAGAAGTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCAACTGGACCCGCCACTGGGTCAACCCACAAGGCCACAGCTATGGCTGGGAAACCGAACTGTCGGCCCCGCGCCAGAACGTCGGCCTGTGGTATGACATTCCCCT > NC_002947/3289656‑3289942 | gTCGCAGAGCTGAACAACGACCTGCAATCGAGCGGCTATTTCGAAGGCGTGCGCGTGGATGCGGCGCCCACTGCTGCTGTGGGCGAAGAAGTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTgg < 4:19047/148‑1 (MQ=255) cAGAGCTGAACAACGACCTGCAATCGAGCGGCTATTTCGAAGGCGTGCGCGTGGATGCGGCGCCCACTGCTGCTGTGGGCGAAGAAGTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTtc > 1:172367/1‑149 (MQ=255) agCTGAACAACGACCTGCAATCGAGCGGCTATTTCGAAGGCGTGCGCGTGGATGCGGCGCCCACTGCTGCTGTGGGCGAAGAAGTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTtctc > 8:182909/1‑148 (MQ=255) gAACAACGACCTGCAATCGAGCGGCTATTTCGAAGGCGTGCGCGTGGATGCGGCGCCCACTGCTGCTGTGGGCGAAGAAGTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTcgacc > 2:105912/1‑148 (MQ=255) acaacGACCTGCAATCGAGCGGCTATTTCGAAGGCGTGCGCGTGGATGCGGCGCCCACTGCTGCTGTGGGCGAAGAAGTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTcgaccgac < 4:147297/149‑1 (MQ=255) gACCTGCAATCGAGCGGCTATTTCGAAGGCGTGCGCGTGGATGCGGCGCCCACTGCTGCTGTGGGCGAAGAAGTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCgg > 7:291918/1‑149 (MQ=255) ccTGCAATCGAGCGGCTATTTCGAAGGCGTGCGCGTGGATGCGGCGCCCACTGCTGCTGTGGGCGAAGAAGTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGc > 1:198019/1‑149 (MQ=255) tGCAATCGAGCGGCTATTTCGAAGGCGTGCGCGTGGATGCGGCGCCCACTGCTGCTGTGGGCGAAGAAGTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGccgcgcggcccgacgtcggtcgagaagcc > 6:73942‑M1/1‑120 (MQ=255) aaTCGAGCGGCTATTTCGAAGGCGTGCGCGTGGATGCGGCGCCCACTGCTGCTGTGGGCGAAGAAGTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCcgcgc < 1:105912/149‑1 (MQ=255) aTCGAGCGGCTATTTCGAAGGCGTGCGCGTGGATGCGGCGCCCACTGCTGCTGTGGGCGAAGAAGTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGccgcgcggcccgacgtcggtcgagaagcccagg < 5:73942‑M1/149‑34 (MQ=255) tCGAGCGGCTATTTCGAAGGCGTGCGCGTGGATGCGGCGCCCACTGCTGCTGTGGGCGAAGAAGTCCCGTTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCgg < 8:188371/149‑1 (MQ=255) cTATTTCGAAGGCGTGCGCGTGGATGCGGCGCCCACTGCTGCTGTGGGCGAAGAAGTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGcaaggcc < 8:103396‑M2/148‑8 (MQ=255) cTATTTCGAAGGCGTGCGCGTGGATGCGGCGCCCACTGCTGCTGTGGGCGAAGAAGTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGcaaggcc < 7:208620‑M2/148‑8 (MQ=255) tATTTCGAAGGCGTGCGCGTGGATGCGGCGCCCACTGCTGCTGTGGGCGAAGAAGTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGccgcgcggcccgacgtcggtcgagaagcccaggccaaggccca > 7:192842‑M1/1‑106 (MQ=255) tttCGAAGGCGTGCGCGTGGATGCGGCGCCCACTGCTGCTGTGGGCGAAGAAGTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGccgcgcggcccgacgtcggtcgagaagcccaggccaaggcccatg < 8:192842‑M1/149‑46 (MQ=255) tttCGAAGGCGTGCGCGTGGATGCGGCGCCCACTGCTGCTGTGGGCGAAGAAGTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCaa < 7:182909/147‑1 (MQ=255) aaGGCGTGCGCGTGGATGCGGCGCCCACTGCTGCTGTGGGCGAAGAAGTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCAACTGGAcc < 2:172367/149‑1 (MQ=255) gCGTGCGCGTGGATGCGGCGCCCACTGCTGCTGTGGGCGAAGAAGTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCAACTGGACCCGc < 4:28108/149‑1 (MQ=255) cgcgTGGATGCGGCGCCCACTGCTGCTGTGGGCGAAGAAGTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCAACTGGACCCGCCACTg > 8:215071/1‑149 (MQ=255) gcgTGGATGCGGCGCCCACTGCTGCTGTGGGCGAAGAAGTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCAACTGGACCCGCCACTgg < 8:291918/149‑1 (MQ=255) ggATGCGGCGCCCACTGCTGCTGTGGGCGAAGAAGTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCAACTGGACCCGCCACTGGGTc > 3:260651/1‑148 (MQ=255) cttcgcCCACAGCAGCAGTGGGCGAAGAAGTCACGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTAGACCGACGTCGGGCCGCGCCGCAAGGCCAACTGGACCCGCCACTGGGTCAACCca > 6:198121/4‑149 (MQ=255) ggcgCCCACTGCTGCTGTGGGCGAAGAAGTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCgg > 4:270695/1‑105 (MQ=255) ggcgCCCACTGCTGCTGTGGGCGAAGAAGTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCgg < 3:270695/105‑1 (MQ=255) aCTGCTGCTGTGGGCGAAGAAGTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCAACTGGACCCGCCACTGGGTCAACCCACAAGGCca > 7:244875/1‑149 (MQ=255) ctgctgTGGGCGAAGAAGTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCAACTGGACCCGCCACTGGGTCAACCCACAAGGCCACAGc > 3:262264/1‑149 (MQ=255) tgctgTGGGCGAAGAAGTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCAACTGGACCCGCCACTGGGTCAACCCACAAGGCCACAGc > 5:285241/1‑148 (MQ=255) ggCGAAGAAGTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGCCGTCGGGCCGCGCGGCAAGGCCAACTGGACCCGCCACTGGGTCAACCCACAAGGCCACAGCTATGGCTg > 3:26911/1‑149 (MQ=255) gCGAAGAAGTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCACCTGGACCCGCCACTGGGTCAACCCACAAGGCCACAGCTATGGCTgg < 7:215071/149‑1 (MQ=255) gCGAAGAAGTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCAACTGGACCCGCCACTGGGTCAACCCACAAGGCCACAGCTATGGCTgg < 7:103396/149‑1 (MQ=255) gaagaaGTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCAACCGGACCCGCCACTGGGTCAACCCACAAGGCCACAGCTATGGCTGGGa < 1:69650/149‑1 (MQ=255) gaagTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCAACTGGACCCGCCACTGGGTCAACCCACAAGGCCACAGCTATGGCTGGGAAAc < 2:241239/149‑1 (MQ=255) aagTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCAACTGGACCCGCCACTGGGTCAACCCACAAGGCCACAGCTATGGCTGGGAAAcc < 4:262264/149‑1 (MQ=255) ccGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCAACTGGACCCGCCACTGGGTCAACCCACAAGGCCACAGCTATGGCTGGGAAACCGAACt > 8:131618/1‑149 (MQ=255) cGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCAACTGGACCCGCCACTGGGTCAACCCACAAGGCCACAGCTATGGCTGGGAAACCGAACTg > 4:292669/1‑149 (MQ=255) tCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCAACTGGACCCGCCACTGGGTCAACCCACAAGGCCACAGCTATGGCTGGGAAACCGAACTGTc > 7:140346/1‑141 (MQ=255) tCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCAACTGGACCCGCCACTGGGTCAACCCACAAGGCCACAGCTATGGCTGGGAAACCGAACTGTc < 8:140346/141‑1 (MQ=255) aTCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCAACTGGACCCGCCACTGGGTCAACCCACAAGGCCACAGCTATGGCTGGGAAACCGAACTGTCGGCCCCgcgc < 8:208620/149‑1 (MQ=255) ggAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCAACTGGACCCGCCACTGGGTCAACCCACAAGGCCACAGCTATGGCTGGGAAACCGAACTGTCGGCCCCGCGCCAg > 1:89659/1‑148 (MQ=255) aCCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCAACTGGACCCGCCACTGGGTCAACCCACAAGGCCACAGCTATGGCTGGGAAACCGAACTGTCGGCCCCGCGCCAGAACGt > 2:305013/1‑149 (MQ=255) gTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCAACTGGACCCGCCACTGGGTCAACCCACAAGGCCACAGCTATGGCTGGGAAACCGAACTGTCGGCCCCGCGCCAGAACGTCGGc < 1:305013/149‑1 (MQ=255) gTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCAACTGGACCCGCCACTGGGTCAACCCACAAGGCCACAGCTATGGCTGGGAAACCGAACTGTCGGCCCCGCGCCAGAACGTCGGc < 7:131618/149‑1 (MQ=255) cACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCAACTGGACCCGCCACTGGGTCAACCCACAAGGCCACAGCTATGGCTGGGAAACCGAACTGTCGGCCCCGCGCCAGAACGTCGGCCTGTgg > 3:308855/1‑149 (MQ=255) cATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGcaaggcccatggtgcgtggtttacgggtttccagatgaacatccaccgggacttcttcgcccacagcagcagtgggcgccgcatccacgcgcacgccttcgaaa < 8:192842‑M2/149‑105 (MQ=255) aTGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCAACTGGACCCGCCACTGGGTCAACCCACAAGGCCACAGCTATGGCTGGGa > 3:263990/1‑101 (MQ=255) aTGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCAACTGGACCCGCCACTGGGTCAACCCACAAGGCCACAGCTATGGCTGGGa < 4:263990/101‑1 (MQ=255) tGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGcaaggcccatggtgcgtggtttacgggtttccagatgaacatccaccgggacttcttcgcccacagcagcagtgggcgccgcatccacgcgcacgccttcgaaata > 7:192842‑M2/1‑43 (MQ=255) ggCCTTGccgcgcggcccgacgtcggtcgagaagcccaggccaaggcccatggtgcgtggtttacgggtttccagatgaacatccaccgggacttcttcgcccacagcagcagtgggcgccgcatccacgcgcacgccttcgaaatag < 8:103396‑M1/148‑142 (MQ=255) ggCCTTGccgcgcggcccgacgtcggtcgagaagcccaggccaaggcccatggtgcgtggtttacgggtttccagatgaacatccaccgggacttcttcgcccacagcagcagtgggcgccgcatccacgcgcacgccttcgaaatag < 7:208620‑M1/148‑142 (MQ=255) ccTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCAACTGGACCCGCCACTGGGTCAACCCACAAGGCCACAGCTATGGCTGGGAAACCGAACTGTCGGCCCCGCGCCAGAACGTCGGCCTGTGGTATGACATTcccc > 5:90906/1‑149 (MQ=255) cTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCAACTGGACCCGCCACTGGGTCAACCCACAAGGCCACAGCTATGGCTGGGAAACCGAACTGTCGGCCCCGCGCCAGAACGTCGGCCTGTGGTATGACATTCCCCt > 3:157388/1‑149 (MQ=255) ggCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCAACTGGACCCGCCACTGGGTCAACCCACAAGGCCACAGCTATGGCTGGGAAACCGAACTGTCGGCCCCGCGCCAGAACGTCGGCCTGTGGt < 3:125234/133‑1 (MQ=255) ggCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCAACTGGACCCGCCACTGGGTCAACCCACAAGGCCACAGCTATGGCTGGGAAACCGAACTGTCGGCCCCGCGCCAGAACGTCGGCCTGTGGt > 4:125234/1‑133 (MQ=255) | GTCGCAGAGCTGAACAACGACCTGCAATCGAGCGGCTATTTCGAAGGCGTGCGCGTGGATGCGGCGCCCACTGCTGCTGTGGGCGAAGAAGTCCCGGTGGATGTTCATCTGGAAACCCGTAAACCACGCACCATGGGCCTTGGCCTGGGCTTCTCGACCGACGTCGGGCCGCGCGGCAAGGCCAACTGGACCCGCCACTGGGTCAACCCACAAGGCCACAGCTATGGCTGGGAAACCGAACTGTCGGCCCCGCGCCAGAACGTCGGCCTGTGGTATGACATTCCCCT > NC_002947/3289656‑3289942 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |