New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4822859 =	44 (0.890)	3 (0.070)	3/238	NT	6.8%	coding (8331/12954 nt)	pvdL	non‑ribosomal peptide synthetase
	?	NC_002947	4822919 =	41 (0.890)					coding (8271/12954 nt)	pvdL	non‑ribosomal peptide synthetase

CAGCCAATGCCTGTTCAAGGGTGGCCTCAACCAAGGGTTGGCGCACCTCCAGCAGCACGGTCTGGTTCCAGTGTTGCGGCTGTGGCACGTCACTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGAATCGACAGGATCGA  >  NC_002947/4822717‑4823005                                                                                                                                               |                                                                                                                                                    cAGCCAATGCCTGTTCAAGGGTGGCCTCAACCAAGGGTTGGCGCACCTCCAGCAGCACGGTCTGGTTCCAGTGTTGCGGCTGTGGCACGTCACTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGAccc                                                                                                                                               <  1:258739/149‑1 (MQ=255)   tcaacgttgcccgggtcggcgtgcaggacaacttcttcgagctggggggcgactcgatcctgtcgattcaggtggtcagccgcgcccgccaggccggcttgcaattcaccccgcgcgacctgttccagcatcagaccatcCAGACCCTg                                                                                                                                             <  1:29542‑M1/9‑1 (MQ=255)    ccgttctgcccggggcggcgtgcaggacaacttcttcgagctggggggcgactcgatcctgtcgattcaggtggtcagccgcgcccgccaggccggcttgcaattcaccccgcgcgacctgttccagcatcagaccatcCAGACCCTg                                                                                                                                             >  7:261549‑M1/140‑148 (MQ=255)      aaTGCCTGTTCAAGGGTGGCCTCAACCAAGGGTTGGCGCACCTCCAGCAGCACGGTCTGGTTCCAGTGTTGCGGCTGTGGCACGACACTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTc                                                                                                                                          >  5:196297/1‑149 (MQ=255)         gCCTGTTCAAGGGTGGCCTCAACCAAGGGTTGGCGCACCTCCAGCAGCACGGTCTGGTTCCAGTGTTGCGGCTGTGGCACGTCACTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑Ac                                                                                                                                      >  3:60276/1‑149 (MQ=255)           cTGTTCAAGGGTGGCCTCAACCAAGGGTTGGCGCACCTCCAGCAGCACGGTCTGGTTCCAGTGTTGCGGCTGTGGCACGTCACTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTg                                                                                                                                             <  8:264157/141‑1 (MQ=255)           cTGTTCAAGGGTGGCCTCAACCAAGGGTTGGCGCACCTCCAGCAGCACGGTCTGGTTCCAGTGTTGCGGCTGTGGCACGTCACTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTg                                                                                                                                             >  7:264157/1‑141 (MQ=255)            cccgggtcggcgtgcaggacaacttcttcgagctggggggcgactcgatcctgtcgattcaggtggtcagccgcgcccgccaggccggcttgcaattcaccccgcgcgacctgttccagcatcagaccatcCAGACCctc                                                                                                                                             <  8:261549‑M1/9‑2 (MQ=255)                cAAGGGTGGCCTCAACCAAGGGTTGGCGCACCTCCAGCAGCACGGTCTGGTTCCAGTGTTGCGGCTGTGGCACGTCACTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGAccc                                                                                                                                               >  6:298097/1‑134 (MQ=255)                cAAGGGTGGCCTCAACCAAGGGTTGGCGCACCTCCAGCAGCACGGTCTGGTTCCAGTGTTGCGGCTGTGGCACGTCACTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGAccc                                                                                                                                               <  5:298097/134‑1 (MQ=255)                cAAGGGTGGCCTCAACCAAGGGTTGGCGCACCTCCAGCAGCACGGTCTGGTTCCAGTGTTGCGGCTGTGGCACGTCACTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTc                                                                                                                               >  7:276270/1‑149 (MQ=255)                              aCCAAGGGTTGGCGCACCTCCAGCAGCACGGTCTGGTTCCAGTGTTGCGGCTGTGGCACGTCACTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGc                                                                                                                                            >  1:270455/1‑123 (MQ=255)                              aCCAAGGGTTGGCGCACCTCCAGCAGCACGGTCTGGTTCCAGTGTTGCGGCTGTGGCACGTCACTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGc                                                                                                                                            <  2:270455/123‑1 (MQ=255)                              aCCAAGGGTTGGCGCACCTCCAGCAGCACGGTCTGGTTCCAGTGTTGCGGCTGTGGCACGACACTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCgctgag                                                                                                                 <  6:196297/149‑1 (MQ=255)                               ccAAGGGTTGGCGCACCTCCAGCAGCACGGTCTGGTTCCAGTGTTGCGGCTGTGGCACGTCACTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCgctgagc                                                                                                                <  4:167420/149‑1 (MQ=255)                                cAAGGGTTGGCGCACCTCCAGCAGCACGGTCTGGTTCCAGTGTTGCGGCTGTGGCACGTCACTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCgctgagct                                                                                                               <  7:127478/149‑1 (MQ=255)                                    ggTTGGCGCACCTCCAGCAGCACGGTCTGGTTCCAGTGTTGCGGCTGTGGCACGTCACTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAAc                                                                                                           >  7:65163/1‑149 (MQ=255)                                                 ccAGCAGCACGGTCTGGTTCCAGTGTTGCGGCTGTGGCACGTCACTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAgg                                                                                              >  7:134627/1‑149 (MQ=255)                                                     gactcgatcctgtcgattcaggtggtcagccgcgcccgccaggccggcttgcaattcaccccgcgcgacctgttccagcatcagaccatcCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCt                                                                                          >  3:133573‑M1/91‑149 (MQ=255)                                                       gcaCGGTCTGGTTCCAGTGTTGCGGCTGTGGCACGTCACTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACca                                                                                                         >  7:282597/1‑132 (MQ=255)                                                       gcaCGGTCTGGTTCCAGTGTTGCGGCTGTGGCACGTCACTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACca                                                                                                         <  8:282597/132‑1 (MQ=255)                                                          gatcctgtcgattcaggtggtcagccgcgcccgccaggccggcttgcaattcaccccgcgcgacctgttccagcatcagaccatcCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAgg                                                                                              >  3:289349‑M1/86‑140 (MQ=255)                                                          gatcctgtcgattcaggtggtcagccgcgcccgccaggccggcttgcaattcaccccgcgcgacctgttccagcatcagaccatcCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAgg                                                                                              <  4:289349‑M1/55‑1 (MQ=255)                                                                  ttCCAGTGTTGCGGCTGTGGCACGTCACTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATg                                                                             >  6:25622/1‑149 (MQ=255)                                                                   tCCAGTG‑TGCGGCTGTGGCACGTCACTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCCGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCt                                                                           >  4:274265/1‑149 (MQ=255)                                                                     cAGTGTTGCGGCTGTGGCACGTCACTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTg                                                                          <  8:134627/149‑1 (MQ=255)                                                                     cAGTGTTGCGGCTGTGGCACGTCACTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTg                                                                          <  4:215676/149‑1 (MQ=255)                                                                                       aCGTCACTGTCGAAGACCCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGt                                                        <  3:202956/149‑1 (MQ=255)                                                                                            aCTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAAtt                                                   <  4:60276/149‑1 (MQ=255)                                                                                             cTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCggg                                                          >  5:297312/1‑141 (MQ=255)                                                                                             cTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCggg                                                          <  6:297312/141‑1 (MQ=255)                                                                                                tCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGc                                                 <  8:276270/147‑1 (MQ=255)                                                                                                       aCCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGcc                                        >  3:198894/1‑149 (MQ=255)                                                                                                         cAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAg                                                                                                      >  2:139729/1‑85 (MQ=255)                                                                                                         cAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAg                                                                                                      <  1:139729/85‑1 (MQ=255)                                                                                                           gTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTggc                                    >  1:177130/1‑149 (MQ=255)                                                                                                                    cGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCgg                            <  8:65163/148‑1 (MQ=255)                                                                                                                     ggCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGc                           <  4:198894/148‑1 (MQ=255)                                                                                                                      gCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCgg                            >  2:300760/1‑146 (MQ=255)                                                                                                                      gCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCgg                            <  1:300760/146‑1 (MQ=255)                                                                                                                           aaCCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGaccac                    >  7:106639/1‑149 (MQ=255)                                                                                                                           aaCCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGaccac                    <  6:64134/149‑1 (MQ=255)                                                                                                                             cccGGCCTGGCCCTGGCGCAGACCCTGCTCCAACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGaccac                    >  1:193990/1‑148 (MQ=255)                                                                                                                             cccGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAAtt                                                   <  2:244471/116‑1 (MQ=255)                                                                                                                             cccGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAAtt                                                   >  1:244471/1‑116 (MQ=255)                                                                                                                             cccGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGaccac                    <  2:193990/147‑1 (MQ=255)                                                                                                                             cccGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCt                  <  2:177130/149‑1 (MQ=255)                                                                                                                                   ctggccctggcGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGAATc             >  5:115077/1‑148 (MQ=255)                                                                                                                                      gccctggcGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGAATCGAc          <  8:106639/148‑1 (MQ=255)                                                                                                                                        cctggcGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGAATCGACAg        >  1:242933/1‑148 (MQ=255)                                                                                                                                             cgcAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGAATCGACAGGATCGa  <  3:274265/149‑1 (MQ=255)                                                                                                                                              gcAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGAATCGACAGGATc    >  7:251948/1‑146 (MQ=255)                                                                                                                                               |                                                                                                                                                    CAGCCAATGCCTGTTCAAGGGTGGCCTCAACCAAGGGTTGGCGCACCTCCAGCAGCACGGTCTGGTTCCAGTGTTGCGGCTGTGGCACGTCACTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGAATCGACAGGATCGA  >  NC_002947/4822717‑4823005

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.