New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4822859 =	44 (0.890)	3 (0.070)	3/238	NT	6.8%	coding (8331/12954 nt)	pvdL	non‑ribosomal peptide synthetase
	?	NC_002947	4822919 =	41 (0.890)					coding (8271/12954 nt)	pvdL	non‑ribosomal peptide synthetase

TTCCAGTGTTGCGGCTGTGGCACGTCACTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGAATCGACAGGATCGAGTCGCCCCCCAGCTCGAAGAAGTTGTCCTGCACGCCGACCCGGGCAACGTTGA  >  NC_002947/4822782‑4823058                                                                                                                                           |                                                                                                                                            ttCCAGTGTTGCGGCTGTGGCACGTCACTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATg                                                                                                                                  >  6:25622/1‑149 (MQ=255)  tCCAGTG‑TGCGGCTGTGGCACGTCACTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCCGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCt                                                                                                                                >  4:274265/1‑149 (MQ=255)    cAGTGTTGCGGCTGTGGCACGTCACTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTg                                                                                                                               <  8:134627/149‑1 (MQ=255)    cAGTGTTGCGGCTGTGGCACGTCACTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTg                                                                                                                               <  4:215676/149‑1 (MQ=255)                      aCGTCACTGTCGAAGACCCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGt                                                                                                             <  3:202956/149‑1 (MQ=255)                           aCTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAAtt                                                                                                        <  4:60276/149‑1 (MQ=255)                            cTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCggg                                                                                                               <  6:297312/141‑1 (MQ=255)                            cTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCggg                                                                                                               >  5:297312/1‑141 (MQ=255)                               tCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGc                                                                                                      <  8:276270/147‑1 (MQ=255)                                      aCCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGcc                                                                                             >  3:198894/1‑149 (MQ=255)                                          gTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTggc                                                                                         >  1:177130/1‑149 (MQ=255)                                                   cGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCgg                                                                                 <  8:65163/148‑1 (MQ=255)                                                    ggCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGc                                                                                <  4:198894/148‑1 (MQ=255)                                                     gCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCgg                                                                                 <  1:300760/146‑1 (MQ=255)                                                     gCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCgg                                                                                 >  2:300760/1‑146 (MQ=255)                                                          aaCCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGaccac                                                                         >  7:106639/1‑149 (MQ=255)                                                          aaCCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGaccac                                                                         <  6:64134/149‑1 (MQ=255)                                                            cccGGCCTGGCCCTGGCGCAGACCCTGCTCCAACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGaccac                                                                         >  1:193990/1‑148 (MQ=255)                                                            cccGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAAtt                                                                                                        <  2:244471/116‑1 (MQ=255)                                                            cccGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAAtt                                                                                                        >  1:244471/1‑116 (MQ=255)                                                            cccGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGaccac                                                                         <  2:193990/147‑1 (MQ=255)                                                            cccGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCt                                                                       <  2:177130/149‑1 (MQ=255)                                                                  ctggccctggcGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGAATc                                                                  >  5:115077/1‑148 (MQ=255)                                                                     gccctggcGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGAATCGAc                                                               <  8:106639/148‑1 (MQ=255)                                                                       cctggcGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGAATCGACAg                                                             >  1:242933/1‑148 (MQ=255)                                                                            cgcAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGAATCGACAGGATCGa                                                       <  3:274265/149‑1 (MQ=255)                                                                             gcAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGAATCGACAGGATc                                                         >  7:251948/1‑146 (MQ=255)                                                                                agaccctggcaactgtggttcagctcagcgaagccgcgagcacggtggagcagggtctgGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGAATCGACAGGATCGAGTc                                                    >  3:133573‑M2/60‑149 (MQ=255)                                                                                    cctggcaactgtggttcagctcagcgaagccgcgagcacggtggagcagggtctgGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGAATCGACAGGATc                                                         <  4:289349‑M2/85‑1 (MQ=255)                                                                                    cctggcaactgtggttcagctcagcgaagccgcgagcacggtggagcagggtctgGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGAATCGACAGGATc                                                         >  3:289349‑M2/56‑140 (MQ=255)                                                                                          c‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGaa                                                                    <  1:185282/122‑1 (MQ=255)                                                                                          c‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGaa                                                                    >  2:185282/1‑122 (MQ=255)                                                                                          c‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGAATCGACAGGATCGAGTCGCCCCCCAGCt                                         <  5:25622/149‑1 (MQ=255)                                                                                          c‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGAGGGCGCGGCTGACCACCTGAATCGACAGGATCGAGTCGCCCCCCAGCt                                         >  3:78286/1‑149 (MQ=255)                                                                                             ccGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGAATCGACAGGATCGAGTCGCCCCCCAGCTc                                        >  1:304493/1‑148 (MQ=255)                                                                                                   tCGCGGCTTCGCTGAGCTGAGCCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGAATCGACAGGATCGAGTCGCCCCCCAGCGCGaagaag                                 >  8:47898/1‑149 (MQ=255)                                                                                                       ggCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGAATCGACAGGATCGAGTCGCCCCCCAGCTCGAAGAAGTTGt                             >  3:308815/1‑149 (MQ=255)                                                                                                        gCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGAATCGACAGGATCGAGTCGCCCCCCAGCTCGAAGAAGTTGTc                            >  4:197675/1‑149 (MQ=255)                                                                                                         cTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGAATCGACAGGATCGAGTCGCCCCCCAGCTCGAAGAAGTTGTcc                           <  3:197675/149‑1 (MQ=255)                                                                                                               tgagctgaACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGAATCGACAGGATCGAGTCGCCCCCCAGCTCGAAGAAGTTGTCCTGCACg                     >  2:29542/1‑149 (MQ=255)                                                                                                                    tgaACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGAGGGGTGAATTGCAAGACGGCCTGACGGGCGCGGCTGACCACCTGAATCGACAGGATCGCGACGCCCCCCAGCTCGAAGAAGTAGTCCTGCAAGCCGAc                >  7:207130/1‑149 (MQ=255)                                                                                                                     gaACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGAATCGACAGGATCGAGTCGCCCCCCAGCTCgaag                                    <  5:56789/128‑1 (MQ=255)                                                                                                                     gaACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGAATCGACAGGATCGAGTCGCCCCCCAGCTCgaag                                    >  6:56789/1‑128 (MQ=255)                                                                                                                            aGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGAATCGACAGTATCGAGTCGCCCCCCAGCTCGAAGAAGTTGTCCTGCACGCCGACCCGGGCaa        >  4:70974/1‑149 (MQ=255)                                                                                                                                  gagggtctgGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGAATCGACAGGATCGAGTCGCCCCCCAGCTCGAAGAAGTTGTCCTGCACGCCGACCCggg           <  8:261549‑M2/131‑1 (MQ=255)                                                                                                                                  cagggtctgGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGAATCGACAGGATCGAGTCGCCCCCCAGCTCGAAGAAGTTGTCCTGCACGCCGCCccgggcagaacgg   >  7:261549‑M2/10‑142 (MQ=255)                                                                                                                                  cagggtctgGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGAATCGACAGGATCGAGTCGCCCCCCAGCTCGAAGAAGTTGTCCTGCACGCCGACCCGGGCAACGTTGa  <  1:29542‑M2/140‑1 (MQ=255)                                                                                                                                           |                                                                                                                                            TTCCAGTGTTGCGGCTGTGGCACGTCACTGTCGAAGAACCAGTGCTGGATCGGCGTCAACCCGGCCTGGCCCTGGCGCAGACCCTGCTCC‑ACCGTGCTCGCGGCTTCGCTGAGCTGAACCACAGTTGCCAGGGTCTGGATGGTCTGATGCTGGAACAGGTCGCGCGGGGTGAATTGCAAGCCGGCCTGGCGGGCGCGGCTGACCACCTGAATCGACAGGATCGAGTCGCCCCCCAGCTCGAAGAAGTTGTCCTGCACGCCGACCCGGGCAACGTTGA  >  NC_002947/4822782‑4823058

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.