New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4889569 =48 (0.970)5 (0.130) 5/202 NT 14.7% intergenic (+15/‑138) hyi/glxR hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
?NC_002947 4889660 = 20 (0.510)intergenic (+106/‑47) hyi/glxR hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase

GCGAGATCAACTACCGCTTCCTGTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGCTAAA  >  NC_002947/4889421‑4889715
                                                                                                                                                    |                                                                                                                                                  
tcgtggtgggtggaaatgaacaggctgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccc                                                                                                                                                    <  1:134880‑M1/1‑1 (MQ=255)
  gtggtgggtggaaatgaacaggctgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacatctttgtaattgtgatatctcaagcaagctttggccccc                                                                                                                                                  <  8:15089‑M1/3‑1 (MQ=255)
     gtgggtggaaatgaacaggctgtgacctgccttttgcaggttctgagccatggccttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCtgt                                                                                                                                               >  1:259144‑M1/144‑149 (MQ=255)
     gtgggtggaaatgaacaggctgggacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCtg                                                                                                                                                >  7:76426‑M1/144‑148 (MQ=255)
     aTCAACTACCGCTTCCTGTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCtgt                                                                                                                                               >  4:309031/1‑149 (MQ=255)
         gtggaaatgaacaggctgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGa                                                                                                                                           >  4:149781‑M1/140‑149 (MQ=255)
             ccGCTTCCTGTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCgg                                                                                                                                       <  8:160380/149‑1 (MQ=255)
               atgaacaggctgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGc                                                                                                                                     <  6:101651‑M1/16‑1 (MQ=255)
               atgaacaggcggtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttaggcatgagaaattacctctttgtaattttgatatctcaagcaagctttggccCCCTGTGGGAGCGGGc                                                                                                                                     >  1:193413‑M1/134‑149 (MQ=255)
                  aacaggctgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTc                                                                                                                                   >  2:134880‑M1/131‑148 (MQ=255)
                   ccTGTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGCAACAACTCGGGACCCTGTGGGAGCGGGATCGcc                                                                                                                                >  8:57411/1‑149 (MQ=255)
                   ccTGATCGAACACCCCCCCCGCATCGCCCACCACCGCTGGGTGCGCGCGGAGTACAACCCCCGGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTc                                                                                                                                   <  8:240690/147‑1 (MQ=255)
                    cTGTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGc                                                                                                                                 <  8:298043/148‑1 (MQ=255)
                      ggctgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCcg                                                                                                                              >  5:101651‑M1/127‑149 (MQ=255)
                        ctgtgacctgccttttgcaggttctgagccatgggattgcccatgatgccggtgacgatgaaaccgattttagccatgagaaattacctctttgtaatagtgatatctcaagaaagctttggccCCCTGTGGGAGCGGGCTcgccccc                                                                                                                             <  5:12002‑M1/24‑3 (MQ=255)
                         tgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCcgcg                                                                                                                            <  3:132347‑M1/25‑1 (MQ=255)
                              acCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCcgc                                                                                                                             >  8:266088/1‑142 (MQ=255)
                              acCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCcgc                                                                                                                             <  7:266088/142‑1 (MQ=255)
                              acCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACAcc                                                                                                                      >  6:319443/1‑149 (MQ=255)
                               ccTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCg                                                                                                                     <  2:115044/149‑1 (MQ=255)
                               ccTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCg                                                                                                                     <  2:119628/149‑1 (MQ=255)
                                  ggACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGc                                                                                                                   >  3:118735/1‑148 (MQ=255)
                                     ccGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAg                                                                                                               >  3:116039/1‑149 (MQ=255)
                                      cGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCCGCAAAGc                                                                                                              >  4:254960/1‑149 (MQ=255)
                                        cATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGccc                                                                                                            >  6:19219/1‑148 (MQ=255)
                                        cATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGCGCCTGGCCTGCCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGCGCTCg                                                                                                                                  >  6:21497/1‑127 (MQ=255)
                                         aTTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGTACCCTGTGGGAGCGGGCTCGACCGCCACCACCGGCAAAGcccg                                                                                                           >  3:168141/1‑147 (MQ=255)
                                          ttGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGt                                                                                                          >  1:73744/1‑149 (MQ=255)
                                          ttGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGt                                                                                                          <  4:116039/149‑1 (MQ=255)
                                               tACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCCGCAAAGCCGGAGCCa                                                                                                      >  2:258044/1‑148 (MQ=255)
                                                      atgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggcaCCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCAcc                                                                                                <  8:262603‑M1/53‑1 (MQ=255)
                                                        tgggtgggCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCg                                                                                                                                  <  8:21590/111‑1 (MQ=255)
                                                        tgggtgggCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCg                                                                                                                                  >  7:21590/1‑111 (MQ=255)
                                                          ggtgggCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGtt                                                                                           <  4:118735/148‑1 (MQ=255)
                                                           gtgggCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGt                                                                                         <  3:309031/149‑1 (MQ=255)
                                                            tgggCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTc                                                                                        >  3:241736/1‑149 (MQ=255)
                                                              gcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTggg                                                                                                                                            >  8:27747‑M1/87‑95 (MQ=255)
                                                              gcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTggg                                                                                                                                            <  7:27747‑M1/9‑1 (MQ=255)
                                                                     atgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggcaCCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTcgcg                                                                               >  7:262603‑M1/80‑149 (MQ=255)
                                                                      tgccggtgccgatgaaaccgattttagccatgagaaattacgtctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCgg                                                                              >  5:274192‑M1/79‑149 (MQ=255)
                                                                          aaGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGa                                                                          <  5:319443/149‑1 (MQ=255)
                                                                               gCTGACCACACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACACCGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGc                                                                    <  7:57411/149‑1 (MQ=255)
                                                                                   accaccaccGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCCGCAAAGCCCGTGCCATCCACCGAGTTGTCTGCTTCGCCGGCGAGCCCGCTcc                                                                 >  4:132347/1‑149 (MQ=255)
                                                                                      accaccGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCcac                                                              >  5:279708/1‑149 (MQ=255)
                                                                                        cgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAg                                                                         >  8:145286‑M1/61‑136 (MQ=255)
                                                                                        cgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAg                                                                         <  7:145286‑M1/76‑1 (MQ=255)
                                                                                         accGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGccc                                                                      >  8:281983/1‑138 (MQ=255)
                                                                                         accGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGccc                                                                      <  7:281983/138‑1 (MQ=255)
                                                                                          ccGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGCACACCGGCAAAGCCGCTGCCCTCCCCCGAGGTGTCTGCGTCGCCGGCGGGCCCGCTCCCCCCggg                                                          >  4:185433/1‑149 (MQ=38)
                                                                                          ccGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAggg                                                          <  3:254960/149‑1 (MQ=255)
                                                                                            gacgCGGGCCGGGGCTGGCTCAAAACCCACAACGCAATCTCCGCAACACCTCGGCACCCTGTGGCTGCGGGCTCGCCCGCGAACACCGCCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAggggg                                                        <  2:73744/146‑1 (MQ=25)
                                                                                             aaGCGGGCCGGGGCGGGCTGAAAACCCACAACCCAAGCTCACGAACACCTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAACGCCGCTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGc                                                       <  3:185433/149‑1 (MQ=25)
                                                                                                        ggctggctGAAAACCCACATCGCTATCTGAGTAACAACTGGGTACCGTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCGGGTGCCTTCGACCGTGTTGTCTGCTTCGGGGGCTAGCCCGCTCCCACAGGGGGCCAAAgctttc                                             <  4:241736/148‑3 (MQ=25)
                                                                                                        ggctggctGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTc                                                                                        <  2:139207/105‑1 (MQ=255)
                                                                                                        ggctggctGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTACCCCGCCAACACCCGCAAAGCCCCTGGCATACACCCAGTTCTAAGCATAGCGGGCGACACCGCTCCCAAAAGCGGCCCAAacatgca                                            >  8:139855/1‑148 (MQ=255)
                                                                                                         gctggctgAAAACCCACAACGCAATCTGAGGAACAACTCGGCACCCTGTGCGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAgcttgctt                                           <  5:91218/149‑1 (MQ=255)
                                                                                                             gctgAAAACCCACAACCCAATCTGAGGAACAACGCGGGACCCTGGGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCCCCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTgag                                        <  6:170255/148‑1 (MQ=255)
                                                                                                              ctgAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTgag                                        >  7:141517/1‑147 (MQ=255)
                                                                                                              ctgAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTgag                                        <  8:141517/147‑1 (MQ=255)
                                                                                                                       caaaaCGCAATCTGAGTAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCTAACACCGGCAAAGCCGGTGCCATCCACCTAGTTGTCTGCTTCGCGGGCGAGCCCGCTcc                                                                 <  5:27979/110‑1 (MQ=25)
                                                                                                                                 tctcAGCAACAACTCGGGACCGTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTgag                                        <  6:256736/128‑1 (MQ=255)
                                                                                                                                 tCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAggg                                                          >  8:16471/1‑110 (MQ=255)
                                                                                                                                 tCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAggg                                                          <  7:16471/110‑1 (MQ=255)
                                                                                                                                 tCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTgag                                        >  5:256736/1‑128 (MQ=255)
                                                                                                                                    gAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCaaa                                                   <  8:223103/114‑1 (MQ=255)
                                                                                                                                    gAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCaaa                                                   >  7:223103/1‑114 (MQ=255)
                                                                                                                                                  caCCCTGTGGTTGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCCCCGAGTTGTCTGCTTCGCGGCCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGCTaaa  <  1:258044/148‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
GCGAGATCAACTACCGCTTCCTGTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGCTAAA  >  NC_002947/4889421‑4889715

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.