New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5167753 =	53 (1.070)	4 (0.090)	4/242	NT	7.8%	coding (127/3906 nt)	hrpA	ATP‑dependent helicase HrpA
	?	NC_002947	5167791 =	45 (0.960)					coding (89/3906 nt)	hrpA	ATP‑dependent helicase HrpA

ATCACCAATACCTGGTTTTCGGCCAGGGCCTTCTTGATTTCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGTGGTCAGTCATGGGGCTTTTTAGTGATGCAGGT  >  NC_002947/5167608‑5167901                                                                                                                                                  |                                                                                                                                                     actttccgaatgccgatcatgaaaaagcaggctcacctgcatcactaaaaagccccatgactgaccacgccatcgacaaactgctgcaacacctcgaccacgccatgattgccgaccgccattgcatgcgccggcacctgcactaACTg                                                                                                                                                   <  4:30244‑M1/4‑1 (MQ=255)      ccgaatgccgatcatgaaaaagcaggctcacctgcatcactaaaaagccccatgactgaccacgccatcgacaaactgctgcaaaacctcgaccacgccatgattgccgaccgccattgcctgcgccggcaactgcacgaACTgcgc                                                                                                                                                <  7:223154‑M1/7‑1 (MQ=255)      cAATACCTGGTTTTCGGCCAGGGCCTTCTTGATTTCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTgcgc                                                                                                                                                >  8:76778/1‑147 (MQ=255)            cTGGTTTTCGGCCAGGGCCTTCTTGATTTCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCg                                                                                                                                        >  1:244719/1‑149 (MQ=255)            cTGGTTTTCGGCCAGGGCCTTCTTGATTTCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCg                                                                                                                                        >  8:74931/1‑149 (MQ=255)                     ggCCAGGGCCTTCTTGATTTCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCgg                                                                                                                               <  3:289165/149‑1 (MQ=255)                     gaaaaagcaggctcacctgcatcactaaaaagccccatgactgaccacgccatcgacaaactgctgcaaaacctcgaccacgccatgattgccgaccgccattgcctgcgccggcaactgcacgaACTGCGCCAGCTTCGCCTCGTCgg                                                                                                                               <  3:23118‑M1/24‑1 (MQ=255)                               ttcttGATTTCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTgcg                                                                                                                     >  2:294252/1‑149 (MQ=255)                                 cttGATTTCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTgcgc                                                                                                                    <  2:217589/148‑1 (MQ=255)                                     aTTTCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTc                                                                                                               <  5:301451/149‑1 (MQ=255)                                     aTTTCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTc                                                                                                               <  7:2621/149‑1 (MQ=255)                                        catcactaaaaagccccatgactgaccacgccatcgacaaactgctgcaaaacctcgaccacgccatgattgccgaccgccattgcctgcgccggcaactgcacgaACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGt                                                                                                             >  4:23118‑M1/107‑148 (MQ=255)                                          gTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGc                                                                                                           <  7:74931/148‑1 (MQ=255)                                          gTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGAACTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCa                                                                                                          >  5:26600/1‑149 (MQ=255)                                          gTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTAAGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTg                                                                                                            >  7:147063/1‑147 (MQ=255)                                          gTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCATACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCa                                                                                                          >  8:56670/1‑149 (MQ=255)                                              taaaaagccccatgactgaccacgccatcgacaaactgctgcaaaacctcgaccacgccatgattgccgaccgccattgcctgcgccggcaactgcacgaACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTc                                                                                                               <  3:197158‑M1/40‑1 (MQ=255)                                              taaaaagccccatgactgaccacgccatcgacaaactgctgcaaaacctcgaccacgccatgattgccgaccgccattgcctgcgccggcaactgcacgaACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTc                                                                                                               >  4:197158‑M1/101‑140 (MQ=255)                                                   ggcggcGATGGGCAGGTTGTCGTCGTAGCGTATGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCg                                                                                                   <  8:147063/147‑1 (MQ=255)                                                      ggcgATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCa                                                                                                                   <  5:59734/128‑1 (MQ=255)                                                      ggcgATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCa                                                                                                                   >  6:59734/1‑128 (MQ=255)                                                              gCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCTGCGCCGGCaactg                                                                                      <  7:76778/149‑4 (MQ=255)                                                              gCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATgg                                                                                      <  1:294252/149‑1 (MQ=255)                                                              gCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCCTgcgcc                                                                                                                   >  1:284553/1‑119 (MQ=255)                                                              gCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCCTgcgcc                                                                                                                   <  2:284553/120‑2 (MQ=255)                                                                      tcgtcgTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATGGCGGTCgg                                                                               >  2:175614/1‑148 (MQ=255)                                                                            tAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCg                                                                                                              <  6:59886/111‑1 (MQ=255)                                                                            tAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCg                                                                                                              >  5:59886/1‑111 (MQ=255)                                                                                    ggTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGt                                                                                                             <  3:84504/104‑1 (MQ=255)                                                                                    ggTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGt                                                                                                             >  4:84504/1‑104 (MQ=255)                                                                                    ggTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATGGCGGTCGGCAAGCATGGCGTGGt                                                                >  3:30244/1‑149 (MQ=255)                                                                                        ggCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATGGCGGTCGGCAATCATGGCGTGGTCGAg                                                            >  6:256883/1‑149 (MQ=255)                                                                                         gCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATGGCGGTc                                                                                 >  6:224885/1‑127 (MQ=255)                                                                                         gCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATGGCGGTc                                                                                 <  5:224885/127‑1 (MQ=255)                                                                                          cACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATGGCGGTCGGCAATCATGGCGTGGTCGAGGt                                                          >  1:143179/1‑149 (MQ=255)                                                                                          cACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATGGCGGTCGGCAATCATGGCGTGGTCGAGGt                                                          >  5:202213/1‑149 (MQ=255)                                                                                            cGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATGGCGGTCGGCAATCATGGCGTGGTCGAGGttt                                                        <  7:56670/149‑1 (MQ=255)                                                                                                 tgctgACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTgcag                                                   >  2:274740/1‑149 (MQ=255)                                                                                                   ctgACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATGGCGGTCGGCAATCATGGCGTGGTCGa                                                             <  4:266084/137‑1 (MQ=255)                                                                                                   ctgACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATGGCGGTCGGCAATCATGGCGTGGTCGa                                                             >  3:266084/1‑137 (MQ=255)                                                                                                        gcgcgGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAg                                                                                             <  4:154774/100‑1 (MQ=255)                                                                                                        gcgcgGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAg                                                                                             >  3:154774/1‑100 (MQ=255)                                                                                                         cgcgGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGt                                           <  4:211435/149‑1 (MQ=255)                                                                                                          gcgGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTc                                          <  2:244719/149‑1 (MQ=255)                                                                                                              tGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATg                                      >  5:206643/1‑149 (MQ=255)                                                                                                                aCCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGTGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCTGGCAATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGc                                    <  6:26600/149‑1 (MQ=255)                                                                                                                aCCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGc                                    >  6:204330/1‑149 (MQ=255)                                                                                                                  cTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGt                                  <  5:204330/149‑1 (MQ=255)                                                                                                                  cTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGt                                  >  7:3415/1‑149 (MQ=255)                                                                                                                    gAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGAAGGTTGTCGATTGCGTgg                                >  7:280135/1‑149 (MQ=255)                                                                                                                       cgcAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGTGgt                               >  5:216795/1‑147 (MQ=255)                                                                                                                            gaggCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGTGGTCAGTCAt                        >  1:244722/1‑149 (MQ=255)                                                                                                                                 cTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGTGGTCAGTCATg                       <  6:227261/145‑1 (MQ=255)                                                                                                                                 cTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGTGGTCAGTCATg                       >  5:227261/1‑145 (MQ=255)                                                                                                                                   ggACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGTGGTCAGTCATGGGGCtt                 <  6:202213/149‑1 (MQ=255)                                                                                                                                    gACCTTCTCCACCCACTGGTCCAGCTTCGCCTCGTCGGTGCGCTTGCTCAGTTCGTGAAGTTGCCGGCGCAGGCAATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGTGGTCAGTCATGGGTCttt                <  8:280135/149‑1 (MQ=255)                                                                                                                                       cTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGTGGTCAGTCATGGGGCTTTTTa             <  2:244722/149‑1 (MQ=255)                                                                                                                                       cTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGTGGTCAGTCATGGGGCTTTTTa             <  2:143179/149‑1 (MQ=255)                                                                                                                                          ctcCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGGTTGTCGATGGCGTGGTCAGTCATGGGGCTTTTTAGt           >  2:314295/1‑148 (MQ=255)                                                                                                                                             cacccacTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGTGGTCAGTCATGGGGCTTTTTAGTGATg       >  5:47928/1‑149 (MQ=255)                                                                                                                                             cacccacTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGTGGTCAGTCATGGGGCTTTTTAGTGATg       >  2:172180/1‑149 (MQ=255)                                                                                                                                                  ACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGTGGTCAGTCATGGGGCTTTTTAGTGATGCAGGt  <  8:223154‑M1/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                     ATCACCAATACCTGGTTTTCGGCCAGGGCCTTCTTGATTTCGTCACGCTTGGCGGCGATGGGCAGGTTGTCGTCGTAGCGTACGGTCGGCACGCTCTGCTGACGCGCGGTGACCTGAGCGCAGGAGGCCTGGACCTTCTCCACCCACTGCGCCAGCTTCGCCTCGTCGGGGCGCTTGCGCAGTTCGTGCAGTTGCCGGCGCAGGCAATGGCGGTCGGCAATCATGGCGTGGTCGAGGTTTTGCAGCAGTTTGTCGATGGCGTGGTCAGTCATGGGGCTTTTTAGTGATGCAGGT  >  NC_002947/5167608‑5167901

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.