New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5220318	48 (0.970)	4 (0.130) +AGCTGGATGCACGGCACCGGCCATGCAACTTCGTCAAACACCTGTTGCCG	4/156	NT	12.0%	coding (416/519 nt)	moaB‑II	molybdenum cofactor biosynthesis protein B
	?	NC_002947	6037861 =	NA (NA)					intergenic (+63/+154)	argB/PP_5290	acetylglutamate kinase/transposase

GTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACATCGGCAACAGGTGTTTGACGAAGTTGCATGGCCGGTGCCGTGCATCCAGCTGCTCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAACGCCCGGCTCTGCACGGTCGAGCTGCCAATATCGAGAATCGACAATGCCCGGAACAACTCGCCGAACCCATCGATACGCTTGTCCAGCAGGCACTCGACCGCTT  >  NC_002947/5220178‑5220465                                                                                                                                             |                                                                                                                                                    gTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACATCGGCAACAGGTGTTTGACGAAGTTGCATGGCCGGTGCCGTGCATCCAGCTGCTCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCggcagg                                                                                                                                             >  2:102756/1‑149 (MQ=255)     ttACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACATCGGCAACAGGTGTTTGACGAAGTTGCATGGCCGGTGCCGTGCATCCAGCTGCTCGGTCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCaa                                                                                                                                          <  5:78788/148‑1 (MQ=255)     ttACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACATCGGCAACAGGTGTTTGACGAAGTTGCATGGCCGGTGCCGTGCATCCAGCTGCTCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCaa                                                                                                                                          <  2:36702/148‑1 (MQ=255)        cTGAAAATTTGCCTCCGGCCATAGAATCTCCTACATCGGCAACAGGTGTTTGACGAAGTTGCATGGCCGGTGCCGTGCATCCAGCTGCTCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACAt                                                                                                                                       <  4:285104/148‑1 (MQ=255)        cTGAAAATTTGCCTCCGGCCATAGAATCTCCTACATCGGCAACAGGTGTTTGACGAAGTTGCATGGCCGGTGCCGTGCATCCAGCTGCTCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATa                                                                                                                                      <  4:294445/149‑1 (MQ=255)           aaaaTTTGCCTCCGGCCATAGAATCTCCTACATCGGCAACAGGTGTTTGACGAAGTTGCATGGCCGGTGCCGTGCATCCAGCTGCTCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATAc                                                                                                                                     <  2:75010/147‑1 (MQ=255)             aaTTTGCCTCCGGCCATAGAATCTCCTACATCGGCAACAGGTGTTTGACGAAGTTGCATGGCCGGTGCCGTGCATCCAGCTGCTCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAAc                                                                                                                                 >  2:110243/1‑149 (MQ=255)                 tGCCTCCGGCCATAGAATCTCCTACATCGGCAACAGGTGTTTGACGAAGTTGCATGGCCGGTGCCGTGCATCCAGCTGCTCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTg                                                                                                                              <  1:317478/148‑1 (MQ=255)                       cGGCCATAGCAGCTCCTACATCGGCAACAGGTGTTTGACGAAGTTGCATGGCCGGTGCCGTGCATCCAGCTGGTCGGCCAGAATGCCTTCCCAGGCGGTGCGGCATGCTCCGGTCGAGCCCGGCAGGCAACATACCAACTTGCGGTTg                                                                                                                        <  6:167176/148‑1 (MQ=255)                             tAGAATCTCCTACATCGGCAACAGGTGTTTGACGAAGTTGCATGGCCGGTGCCGTGCATCCAGCTGCTCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGt                                                                                                                          <  1:245459/140‑1 (MQ=255)                             tAGAATCTCCTACATCGGCAACAGGTGTTTGACGAAGTTGCATGGCCGGTGCCGTGCATCCAGCTGCTCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGt                                                                                                                          >  2:245459/1‑140 (MQ=255)                               gAATCTCCTACATCGGCAACAGGTGTTTGACGAAGTTGCATGGCCGGTGCCGTGCATCCAGCTGCTCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCg                                                                                                               >  7:72691/1‑149 (MQ=255)                                  tctcCTACATCGGCAACAGGTGTTTGACGAAGTTGCATGGCCGGTGCCGTGCATCCAGCTGCTCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCggcagg                                                                                                                                             >  1:307678/1‑116 (MQ=255)                                  tctcCTACATCGGCAACAGGTGTTTGACGAAGTTGCATGGCCGGTGCCGTGCATCCAGCTGCTCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCggcagg                                                                                                                                             <  2:307678/116‑1 (MQ=255)                                      cTACATCGGCAACAGGTGTTTGACGAAGTTGCATGGCCGGTGCCGTGCATCCAGCTGCTCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAAc                                                                                                         <  1:110243/148‑1 (MQ=255)                                           tCGGCAACAGGTGTTTGACGAAGTTGCATGGCCTGTGCCGTGCATCCAGCTGCTCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGc                                                                                                                             <  4:300480/123‑1 (MQ=255)                                           tCGGCAACAGGTGTTTGACGAAGTTGCATGGCCGGTGCCGTGCATCCAGCTGCTCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGc                                                                                                                             >  3:300480/1‑123 (MQ=255)                                             ggCAACAGGTGTTTGACGAAGTTGCATGGCCGGTGCCGTGCATCCAGCTGCTCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAACGCCCGGct                                                                                                 >  3:228359/1‑149 (MQ=255)                                                  cAGGTGTTTGACGAAGTTGCATGGCCGGTGCCGTGCATCCAGCTGCTCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAACGCCCGGCTCTGCa                                                                                            <  8:41840/149‑1 (MQ=255)                                                      tggttGACGAAGTTGCATGGCCGGTGCCGTGCATCCAGCTGCTCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAACGCCCGGCTCTGCACGGt                                                                                        <  7:116640/146‑1 (MQ=255)                                                                     cATGGCCGGTGCCGTGCATCCAGCTGCTCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAACGCCCGGCTCTGCACGGTCGAGCTGCCAATATc                                                                         <  7:18648/149‑1 (MQ=255)                                                                     cATGGCCGGTGCCGTGCATCCAGCTGCTCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAACGCCCGGCTCTGCACGGTCGAGCTGCCAATATc                                                                         >  6:147767/1‑149 (MQ=255)                                                                       tGGCCGGTGCCGTGCATCCAGCTGCTCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAACGCCCGGCTCTGCACGGTCGAGCTGCCAATATc                                                                         >  8:248859/1‑147 (MQ=255)                                                                       tGGCCGGTGCCGTGCATCCAGCTGCTCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAACGCCCGGCTCTGCACGGTCGAGCTGCCAATATCga                                                                       <  5:147767/149‑1 (MQ=255)                                                                        ggCCGGTGCCGTGCATCCAGCTGCTCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAACGCCCGGCTCTGCACGGTCGAGCTGCCAATATc                                                                         >  2:94421/1‑146 (MQ=255)                                                                         gCCGGTGCCGTGCATCCAGCTGCTCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAACGCCCGGCTCTGCACGGTCGAGCTGCCAATATCgaga                                                                     <  3:34551/149‑1 (MQ=255)                                                                         gCCGGTGCCGTGCATCCAGCTGCTCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAACGCCCGGCTCTGCACGGTCGAGCTGCCAATATCgaga                                                                     <  1:102756/149‑1 (MQ=255)                                                                                  gTGCATCCAGCTGCTCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAACGCCCGGCTCTGCACGGTCGAGCTGCCAATATCGAGAATCGACAAt                                                            >  5:302039/1‑149 (MQ=255)                                                                                       tCCAGCTGCTCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCagctggatgcacggcaccggccatgcaacttcgtcaaacacctgttgccgatgtaggagattctatggccggaggcaaattttcagtaaaaacg                                                       >  4:284‑M1/1‑55 (MQ=255)                                                                                            ctgctCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCagctggatgcacggcaccggccatgcaacttcgtcaaacacctgttgccgatgtaggagattctatggccggaggcaaattttcagtaaaaacgccatc                                                  >  5:71307‑M1/1‑50 (MQ=255)                                                                                            ctgctCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAACGCCCGGCTCTGCACGGTCGAGCTGCCAATATCGAGAATCGACAATGCCCGGaac                                                   >  2:68171/1‑148 (MQ=255)                                                                                            ctgctCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAACGCCCGGCTCTACACGGTCGAGCTGCCAATATCGAGAATCGACAATGCCCGGaac                                                   >  5:92519/1‑148 (MQ=255)                                                                                               ctCGGACAGAATGCCTTCCCAGGCTGTGCGGCAGGCTCCGGTAGAGCCCGGCAGGCAACATACCAACGTGCTGTTTGACAACCCGGCCAACGCCCGGCTCTGCACGGTCGAGCTGCCAATATCGAGAATCGACAATGCCCGGaaca                                                  <  7:257393/146‑1 (MQ=255)                                                                                                       gAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCagctggatgcacggcaccggccatgcaacttcgtcaaacacctgttgccgatgtaggagattctatggccggaggcaaattttcagtaaaaacgccatcggcctctctca                                       <  3:284‑M1/149‑111 (MQ=255)                                                                                                            ccTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAACGCCCGGCTCTGCACGGTCGAGCTGCCAATATCGAGAATCGACAATGCCCGGAACAACTCGCCGAACCCATc                                  >  7:37596/1‑149 (MQ=255)                                                                                                             cTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAACGCCCGGCTCTGCACGGTCGAGCTGCCAATATCGAGAATCGACAATGCCCGGAACAACTCGCCGAACCCATc                                  >  7:88072/1‑148 (MQ=255)                                                                                                             cTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAACGCCCGGCTCTGCACGGTCGAGCTGCCAATATCGAGAATCGACAATGCCCGGAACAACTCGCCGAACCCATCg                                 <  6:302039/149‑1 (MQ=255)                                                                                                              ttCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAACGCCCGGCTCTGCACGGTCGAGCTGCCAATATCGAGAATCg                                                                 <  8:280128/116‑1 (MQ=255)                                                                                                              ttCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAACGCCCGGCTCTGCACGGTCGAGCTGCCAATATCGAGAATCg                                                                 >  7:280128/1‑116 (MQ=255)                                                                                                              ttCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAACGCCCGGCTCTGCACGGTCGAGCTGCCAATATCGAGAATCGACAATGCCCGGAACAACTc                                              <  1:29889/135‑1 (MQ=255)                                                                                                              ttCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAACGCCCGGCTCTGCACGGTCGAGCTGCCAATATCGAGAATCGACAATGCCCGGAACAACTc                                              >  2:29889/1‑135 (MQ=255)                                                                                                                 ccAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCGACGTGCGGTTGGACAACCCGGCCAACGCCCGGCTCTGCACGGTCGAGCTGCCAATATCGAGAATCGACAATGCCCGGAACAACTCGCCGAACCCATCGCTAc                             >  7:126418/1‑149 (MQ=255)                                                                                                                  cAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAACGCCCGGCTCTGCACGGTCGAGCTGCCAATATCGAGAATCGACAATGCCCGGAACAACTCGCCGAACCCATCGATACg                            <  8:37596/149‑1 (MQ=255)                                                                                                                  cAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTAGACAACCCGGCCAACGCCCGGCTCTGCACGGTCGAGCTGCCAATATCGAGAATCGACAATGCCCGGAACAACTCGCCGAACCCATCGATACg                            >  1:245964/1‑149 (MQ=255)                                                                                                                   aGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAACGCCCGGCTCTGCACGGTCGAGCTGCCAATATCGAGAATCGACAATGCCCGGAACAACTCGCCGAACCCATCGATACGc                           <  8:88072/149‑1 (MQ=255)                                                                                                                      cGGTGCGGCAGGCTCCGGTCGAGCagctggatgcacggcaccggccatgcaacttcgtcaaacacctgttgccgatgtaggagattctatggccggaggcaaattttcagtaaaaacgccatcggcctctctcagcaacctcgaggtac                        <  6:71307‑M1/149‑126 (MQ=255)                                                                                                                         tGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAACGCCCGGCTCTGCACGGTCGAGCTGCCAATATCGAGAATCGACAATGCCCGGAACAACTCGCCGAACCCATCGATACGCTTGTcc                     <  8:72691/149‑1 (MQ=255)                                                                                                                                 gCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAACGCCCGGCTCTGCACGGTCGAGCTGCCAATATCGAGAATCGACAATGCCCGGAACAACTCGCCGAACCCATCGATACGc                           <  1:230336/135‑1 (MQ=255)                                                                                                                                 gCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAACGCCCGGCTCTGCACGGTCGAGCTGCCAATATCGAGAATCGACAATGCCCGGAACAACTCGCCGAACCCATCGATACGc                           >  2:230336/1‑135 (MQ=255)                                                                                                                                   tCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAACGCCCGGCTCTGCACGGTCGAGCTGCCAATATCGAGAATCGACAATGCCCGGAACAACTCGCCGAACCCATCGATACGCTTGTCCAGCAGGCACt           >  2:256851/1‑149 (MQ=255)                                                                                                                                     cGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAACGCCCGGCTCTGCACGGTCGAGCTGCCAATATCGAGAATCGACAATGCCCGGAACAACTCGCCGAACCCATCGATACGCTTGTCCAGCAGGCACt           <  1:68171/147‑1 (MQ=255)                                                                                                                                     cGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAACGCCCGGCTCTGCACGGTCGAGCTGCCAATATCGAGAATCGACAATGCCCGGAACAACTCGCCGAACCCATCGATACGCTTGTCCAGCAGGCACTc          >  8:103806/1‑148 (MQ=255)                                                                                                                                          gAGCagctggatgcacggcaccggccatgcaacttcgtcaaacacctgttgccgatgtaggagattctatggccggaggcaaattttcagtaaaaacgccatcggcctctctcagcaacctcgaggtacgagtcagcgtgccagagaat    <  3:294445‑M1/149‑146 (MQ=255)                                                                                                                                          gAGCagctggatgcacggcaccggccatgcaacttcgtcaaacacctgttgccgatgtaggagattctatggccggaggcaaattttcagtaaaaacgccatcggcctctctcagcaacctcgaggtacgagtcagcgtgccaga        >  6:54046‑M1/1‑4 (MQ=255)                                                                                                                                          gAGCagctggatgcacggcaccggccatgcaacttcgtcaaacacctgttgccgatgtaggagattctatggccggaggcaaattttcagtaaaaacgccatcggcctctctcagcaacctcgaggtacgagtcagcgtgccaga        <  5:54046‑M1/145‑142 (MQ=255)                                                                                                                                            gCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAACGCCCGGCTCTGCACGGTCGAGCTGCCAATATCGAGAATCGACAATGCCCGGAACAACTCGCCGAACCCATCGATACGCTTGTCCAGCAGGCACTCGACCGCtt  >  7:34339/1‑149 (MQ=255)                                                                                                                                             |                                                                                                                                                    GTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACATCGGCAACAGGTGTTTGACGAAGTTGCATGGCCGGTGCCGTGCATCCAGCTGCTCGGCCAGAATGCCTTCCCAGGCGGTGCGGCAGGCTCCGGTCGAGCCCGGCAGGCAACATACCAACGTGCGGTTGGACAACCCGGCCAACGCCCGGCTCTGCACGGTCGAGCTGCCAATATCGAGAATCGACAATGCCCGGAACAACTCGCCGAACCCATCGATACGCTTGTCCAGCAGGCACTCGACCGCTT  >  NC_002947/5220178‑5220465

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.