New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5649805 =	48 (0.970)	3 (0.060)	3/242	NT	6.9%	coding (1388/2127 nt)	PP_4959	diguanylate cyclase
	?	NC_002947	5649839 =	35 (0.750)					coding (1354/2127 nt)	PP_4959	diguanylate cyclase

CAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAG  >  NC_002947/5649657‑5649944                                                                                                                                                     |                                                                                                                                               ggcattgccacctacccggactgtggcgccaatgtcgaaggcctgctgcgttcggccgatgcagcaatgtacgcagccaagcaagcggggcgtcagcaataccgcttctacgaccaggaactcaacggacgggcgcgctcgcgattgat                                                                                                                                                <  5:292537‑M1/1‑1 (MQ=255)   cattgccacctacccggactgtggcgccaatgtcgaaggcctgctgcgttcggccgatgcagcaatgtacgcagccaagcaagcggggcgtcagcaataccgcttctacgaccaggaactcaacggacgggcgcgctcgcgattgaTGc                                                                                                                                              <  1:182223‑M1/3‑1 (MQ=255)    ccGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTgctgct                                                                                                                                             <  3:290090/149‑1 (MQ=255)    ccGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTgctgct                                                                                                                                             <  3:46661/149‑1 (MQ=255)    ccGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTgctgct                                                                                                                                             >  8:46125/1‑149 (MQ=255)     ttgccacctacccggactgtggcgccaatgtcgaaggcctgctgcgttcggccgatgcagcaatgtacgcagccaagcaagcggggcgtcagcaataccgcttctacgaccaggaactcaacggacgggcgcgctcgcgattgaTGCTc                                                                                                                                            <  6:289085‑M1/5‑1 (MQ=255)        ccacctacccggactgtggcgccaatgtcgaaggcctgctgcgttcggccgatgcagcaatgtacgcagccaagcaagcggggcgtcagcaataccgcttctacgaccaggaactcaacggacgggcgcgctcgcgattgaTGCTCGa                                                                                                                                          >  4:108423‑M1/142‑148 (MQ=255)        ccacctacccggactgtggcgccaatgtcgaaggcctgctgcgttcggccgatgcagcaatgtacgcagccaagcaagcggggcgtcagcaataccgcttctacgaccaggaactcaacggacgggcgcgctcgcgattgaTGCTCGa                                                                                                                                          >  6:54124‑M1/142‑148 (MQ=255)         cttcttCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATg                                                                                                                                        <  7:46125/149‑1 (MQ=255)           tcttcCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGc                                                                                                                                      >  5:126475/1‑149 (MQ=255)             ttcCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGCTACACAAAGGTAAAGTCCTGCTGCTCGCTGGcaa                                                                                                                                    >  4:166990/1‑147 (MQ=255)               ccAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGcc                                                                                                                                     <  1:177591/146‑1 (MQ=255)                 aGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATgc                                                                                                                                 >  7:211042/1‑148 (MQ=255)                  gCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATgcg                                                                                                                                >  7:76991/1‑148 (MQ=255)                              aCAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑Tc                                                                                                                 <  3:135135/148‑1 (MQ=255)                                aGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGc                                                                                                                                      >  7:6593/1‑128 (MQ=255)                                aGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGc                                                                                                                                      <  8:6593/128‑1 (MQ=255)                                  ccccGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑Tc                                                                                                                 <  2:101253/144‑1 (MQ=255)                                  ccccGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑Tc                                                                                                                 >  1:101253/1‑144 (MQ=255)                                  ccccGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCa                                                                                                            >  4:66789/1‑149 (MQ=255)                                    ccGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCATc                                                                                                          <  8:76991/149‑1 (MQ=255)                                        ctgcACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCATCAATc                                                                                                      <  8:211042/147‑1 (MQ=255)                                            acaTCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGAAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGAGCA‑CGC‑TGTCC‑TCGAGCATCAATcgc                                                                                                    >  5:319208/1‑147 (MQ=255)                                                   cAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCATCAATCGCGAGCGCGcc                                                                                           >  5:289085/1‑149 (MQ=255)                                                    aaCGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCATCAATCGCGAGCGCGccc                                                                                          >  2:282089/1‑149 (MQ=255)                                                         tGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACTCAGGCGGCCATCGGGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGAGCA‑CGC‑TGTCC‑TCGAGCATCAAGCGCGAGCGAGCtcggaag                                                                                     >  6:281700/1‑145 (MQ=255)                                                          gatgcagcaatgtacgcagccaagcaagcggggcgtcagcaataccgcttctacgaccaggaactcaacggacgggcgcgctcgcgattgaTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCAt                                                                                                           <  3:210757‑M1/35‑1 (MQ=255)                                                          gatgcagcaatgtacgcagccaagcaagcggggcgtcagcaataccgcttctacgaccaggaactcaacggacgggcgcgctcgcgattgaTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCAt                                                                                                           >  4:210757‑M1/92‑126 (MQ=255)                                                             gTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGc                                                                                                                          <  2:81207/110‑1 (MQ=255)                                                             gTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGc                                                                                                                          >  1:81207/1‑110 (MQ=255)                                                             gTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCATCAATCGCGAGCACGCCCGTCCGTTGa                                                                                 <  5:235603/149‑1 (MQ=255)                                                                 tgcCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CTC‑TGTCC‑TCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTc                                                                             <  3:166990/149‑1 (MQ=255)                                                                 tgcCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCATCAATCGCGAGCGCGCCCGTCCGtt                                                                                   <  7:114339/143‑1 (MQ=255)                                                                 tgcCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCATCAATCGCGAGCGCGCCCGTCCGtt                                                                                   >  8:114339/1‑143 (MQ=255)                                                                  gcCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑AGTCC‑TCGAGCATCAATCGCGAGCGCCCCCGTCCGTTGAGTTc                                                                             >  4:194125/1‑148 (MQ=255)                                                                   ccAGCGCAGCAAGGCCTCGAAACCACGCAGGCCGCCAGCGTGGAAGGCGACCTGTGGCGGGTACACCAAGGTAAAGTCCTGCTGCGCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCt                                                                           <  2:204273/149‑1 (MQ=255)                                                                       cgcAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTc                                                                       <  3:66789/149‑1 (MQ=255)                                                                              aGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAg                                                                >  2:250508/1‑149 (MQ=255)                                                                                     gAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTAtt                                                         >  2:28142/1‑149 (MQ=255)                                                                                       aaCCACGCCGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGc                                                       <  2:235082/149‑1 (MQ=255)                                                                                        aCCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCt                                                      <  6:284880/149‑1 (MQ=255)                                                                                          cACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGc                                                       >  2:90165/1‑146 (MQ=255)                                                                                          cACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGc                                                       <  1:90165/146‑1 (MQ=255)                                                                                                        tCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCgcttgctt                                      >  6:146524/1‑149 (MQ=255)                                                                                                          gTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTgg                                    >  4:304853/1‑149 (MQ=255)                                                                                                                  cGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTAc                            <  1:282089/149‑1 (MQ=255)                                                                                                                        gtgGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAg                                                                   <  1:21345/104‑1 (MQ=255)                                                                                                                        gtgGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAg                                                                   >  2:21345/1‑104 (MQ=255)                                                                                                                         tgGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATtgct                      <  8:96106/148‑1 (MQ=255)                                                                                                                            cTGGTACACCAAGGTACAGTCCTGGTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGGATCAATCGCGTGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGATCCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCAt                  <  6:319208/149‑1 (MQ=255)                                                                                                                                tACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGc                                                       <  7:159563/108‑1 (MQ=255)                                                                                                                                tACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGc                                                       >  8:159563/1‑108 (MQ=255)                                                                                                                                tACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGc              <  6:126475/149‑1 (MQ=255)                                                                                                                                     cAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCAGCGC‑TGTCC‑TCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGaa          >  1:46990/1‑149 (MQ=255)                                                                                                                                     cAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAAc         <  1:250508/149‑1 (MQ=255)                                                                                                                                        ggTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTgg                                    <  2:272057/119‑1 (MQ=255)                                                                                                                                        ggTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTgg                                    >  1:272057/1‑119 (MQ=255)                                                                                                                                          ctcgcgattgaTGCTCGA‑GGACA‑GCGTG‑CGCATGGCCATCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACgcag     <  5:196054‑M1/137‑1 (MQ=255)                                                                                                                                            aaGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGcagcag  <  3:194125/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                               CAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGGTACACCAAGGTAAAGTCCTGCTGCTCGATGGCCATGCGCA‑CGC‑TGTCC‑TCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAG  >  NC_002947/5649657‑5649944

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.