New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5785094 =62 (1.260)4 (0.090) 3/244 NT 6.1% coding (98/1461 nt) PP_5068 hypothetical protein
?NC_002947 5785152 = 63 (1.340)coding (156/1461 nt) PP_5068 hypothetical protein

GAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACTCACCTTCGACAACCGCTTCGCCCGCCTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTC  >  NC_002947/5784948‑5785242
                                                                                                                                                  |                                                                                                                                                    
gcacttcggccagcagcaggccacggccgtcgcccagacgtgggttgtacgagccgaactggtggccggaataaaccatcgcccgagggtcggcctcttcccacagtttgtggccgctgaacagctcggcgaacaccggcagctcgGcc                                                                                                                                                    >  1:258081‑M1/147‑149 (MQ=255)
   aGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACTCACCTTCGACAACCGCTTCGCCCGCCTTGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCtgg                                                                                                                                                 <  1:246076/149‑1 (MQ=255)
   aGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACTCACCTTCGACAACCGCTTCGCCCGCCTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCtgg                                                                                                                                                 >  7:95182/1‑149 (MQ=255)
       cgccAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACTCACCTTCGACAACCGCTTCGCCCGCCTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCtggtgg                                                                                                                                              >  4:102680/1‑148 (MQ=255)
        gccAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACTCACCTTCGACAACCGCTTCGCCCGCCTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCtggtg                                                                                                                                               <  5:239739/146‑1 (MQ=255)
        gccAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACTCACCTTCGACAACCGCTTCGCCCGCCTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCtggtg                                                                                                                                               >  6:239739/1‑146 (MQ=255)
          cAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACTCACCTTCGACAACCGCTTCGCCCGCCTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTagc                                                                                                                                          <  4:147826/149‑1 (MQ=255)
                  cccATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACTCACCTTCGACAACCGCTTCGCCCGCCTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTa                                                                                                                                            >  4:138935/1‑139 (MQ=255)
                  cccATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACTCACCTTCGACAACCGCTTCGCCCGCCTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTa                                                                                                                                            <  3:138935/139‑1 (MQ=255)
                     aTTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACTCACCTTCGACAACCGCTTCGCCCGCCTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCgg                                                                                                                               <  8:95182/149‑1 (MQ=255)
                                   cAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACTCACCTTCGACAACCGCTTCGCCCGCCTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGctc                                                                                                                 >  6:92836/1‑149 (MQ=255)
                                    aaGGAGCAGTCCCGTGAAAGCCCTCGACCAACTCACCTTCGACAACCGCTTCGCCCGCCTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGctc                                                                                                                 >  6:128069/1‑148 (MQ=255)
                                             tCCCGTGAAAGCCCTCGACCAACTCACCTTCGACAACCGCTTCGCCCGCCTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCtcgacctcgacc                                                                                                       >  4:209791/1‑149 (MQ=255)
                                             tCCCGTGAAAGCCCTCGACCAACTCACCTTCGACAACCGCTTCGCCCGCCTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCtcgacctcgacc                                                                                                       >  1:252491/1‑149 (MQ=255)
                                              gtacgagccgaactggtggccggaataaaccatcgcccgagggtcggcctcttcccacagtttgtggccgctgaacagctcggcgaacaccggcagctcgGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGAccc                                                                                                      <  3:59870‑M1/49‑1 (MQ=255)
                                                      aGCCCTCGACCAACTCACCTTCGACAACCGCTTCGCCCGCCTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAgg                                                                                              <  8:84830/149‑1 (MQ=255)
                                                       gaactggtggccggaataaaccatcgcccgagggtcggcctcttcccacagtttgtggccgctgaacagctcggcgaacaccggcagctcgGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGc                                                                                             >  4:155840‑M1/92‑149 (MQ=255)
                                                       actggtggccggaataaaccatcgcccgagggtcggcctcttcccacagtttgtggccgctgaacagctcggcgaacaccggcagacccgcGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGc                                                                                             >  5:49781‑M1/92‑149 (MQ=255)
                                                         ccTCGACCAACTCACCTTCGACAACCGCTTCGCCCGCCTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGcc                                                                                            >  6:235266/1‑148 (MQ=255)
                                                          ctggtggccggaataaaccatcgcccgagggtcggcctcttcccacagtttgtggccgctgaacagctcggcgaacaccggcagctcgGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGa                                                                                          >  4:59870‑M1/89‑149 (MQ=255)
                                                          cTCGACCAACTCACCTTCGACAACCGCTTCGCCCGCCTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGa                                                                                          <  5:92836/149‑1 (MQ=255)
                                                             gACCAACTCACCTTCGACAACCGCTTCGCCCGCCTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAg                                                                                         <  5:235266/147‑1 (MQ=255)
                                                               ccAACTCACCTTCGACAACCGCTTCGCCCGCCTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGc                                                                                     <  2:252491/149‑1 (MQ=255)
                                                                cAACTCACCTTCGACAACCGCTTCGCCCGCCTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGcc                                                                                    >  3:182795/1‑149 (MQ=255)
                                                                  cggaataaaccatcgcccgagggtcggcctcttcccacagtttgtggccgctgaacagctcggcgaacaccggtagctcgGc                                                                                                                                                     >  6:194890‑M1/81‑82 (MQ=255)
                                                                  cggaataaaccatcgcccgagggtcggcctcttcccacagtttgtggccgctgaacagctcggcgaacaccggtagctcgGc                                                                                                                                                     <  5:194890‑M1/2‑1 (MQ=255)
                                                                  aCTCACCTTCGACAAACGCTTCGCCCGCATGGGCGATGCGTTCTCCACCAAGGTCCTGCCCGAGCCCATTGCAGACACGCGCCTGGTGGTAGCGAGAGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGACCAGGCAGCGCTGCCgg                                                                                  >  5:17982/1‑149 (MQ=255)
                                                                      aCCTTCGACAACCGCTTCGCCCGCCTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGgtgt                                                                               <  3:102680/148‑1 (MQ=255)
                                                                         ttCGACAACCGCTTCGCCCGCCTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGc                                                                           >  5:162879/1‑149 (MQ=255)
                                                                             aCAACCGCTTCGCCCGCCTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAg                                                                       >  2:197554/1‑149 (MQ=255)
                                                                             aCAACCGCTTCGCCCGCCTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAg                                                                       >  6:162848/1‑149 (MQ=255)
                                                                             aCAACCGCTTCGCCCGCCTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAg                                                                       >  5:62092/1‑149 (MQ=255)
                                                                              cAACCGCTTCGCCCGCCTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGc                                                                      >  8:288780/1‑149 (MQ=255)
                                                                               aaCCGCTTCGCCCGCCTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCt                                                                     >  2:165923/1‑149 (MQ=255)
                                                                                 ccGCTTCGCCCGCCTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGcgagcgag                                                                                                                                   >  8:218479/1‑85 (MQ=255)
                                                                                 ccGCTTCGCCCGCCTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGcgagcgag                                                                                                                                   <  7:218479/85‑1 (MQ=255)
                                                                                  cGCTTCGCCCGCCTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGtt                                                                  >  4:295587/1‑149 (MQ=255)
                                                                                        gcccgccTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCgg                                                            <  7:288780/149‑1 (MQ=255)
                                                                                         cccaggcgggCGAAGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGc                                                           <  3:6240/142‑1 (MQ=255)
                                                                                          ccgccTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGc                                                           >  1:269461/1‑148 (MQ=255)
                                                                                            gccTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCca                                                         >  1:305460/1‑148 (MQ=255)
                                                                                                   cGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGc                                                                      <  7:62980/128‑1 (MQ=255)
                                                                                                   cGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGc                                                                      >  8:62980/1‑128 (MQ=255)
                                                                                                    gATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACtgtg                                                <  1:165923/149‑1 (MQ=255)
                                                                                                     aTGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTgg                                               <  5:128069/149‑1 (MQ=255)
                                                                                                        cGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGaa                                            <  3:295587/149‑1 (MQ=255)
                                                                                                         gTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGa                                                                                          <  4:290194/102‑1 (MQ=255)
                                                                                                         gTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGa                                                                        <  5:119787/120‑1 (MQ=255)
                                                                                                         gTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTggg                                              >  5:259241/1‑146 (MQ=255)
                                                                                                         gTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACACCGCCCAGGCCGa                                                                                          >  3:290194/1‑102 (MQ=255)
                                                                                                         gTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTACCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGa                                                                        >  6:119787/1‑120 (MQ=255)
                                                                                                             tcCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGc                                       >  3:291143/1‑149 (MQ=255)
                                                                                                              ccACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGc                                                           <  5:76794/128‑1 (MQ=255)
                                                                                                              ccACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGc                                                           >  6:76794/1‑128 (MQ=255)
                                                                                                                aCCCAGGTACTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGa                                    >  4:145368/1‑149 (MQ=255)
                                                                                                                  ccAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGc                                                           >  5:292829/1‑124 (MQ=255)
                                                                                                                  ccAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGc                                                           <  6:292829/124‑1 (MQ=255)
                                                                                                                            cccGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACtgtg                                                <  6:165316/125‑1 (MQ=255)
                                                                                                                            cccGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACtgtg                                                >  5:165316/1‑125 (MQ=255)
                                                                                                                            cccGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACtgt                                                 <  3:87350/124‑1 (MQ=255)
                                                                                                                            cccGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACtgt                                                 >  4:87350/1‑124 (MQ=255)
                                                                                                                                aGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGtt                    <  3:209791/149‑1 (MQ=255)
                                                                                                                                aGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGtt                    <  6:259241/149‑1 (MQ=255)
                                                                                                                                  cccATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTa                  <  4:182795/149‑1 (MQ=255)
                                                                                                                                   ccATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTAt                 <  5:162848/149‑1 (MQ=255)
                                                                                                                                    cATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTAtt                <  1:238903/149‑1 (MQ=255)
                                                                                                                                      ttGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGtt                                                                  >  6:288034/1‑97 (MQ=255)
                                                                                                                                      ttGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGtt                                                                  <  5:288034/97‑1 (MQ=255)
                                                                                                                                          aGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGc           >  7:34599/1‑148 (MQ=255)
                                                                                                                                              ccGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACaaa                                                     >  7:175855/1‑102 (MQ=255)
                                                                                                                                              ccGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACaaa                                                     <  8:175855/102‑1 (MQ=255)
                                                                                                                                              ccGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGccac        >  4:242191/1‑147 (MQ=255)
                                                                                                                                                  GCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTc  >  1:197554‑M1/1‑149 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
GAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACTCACCTTCGACAACCGCTTCGCCCGCCTGGGCGATGCGTTCTCCACCCAGGTGCTGCCCGAGCCCATTGCAGACCCGCGCCTGGTGGTAGCGAGCGAGTCGGCCATGGCCTTGCTCGACCTCGACCCCGCCCAGGCCGAGCTGCCGGTGTTCGCCGAGCTGTTCAGCGGCCACAAACTGTGGGAAGAGGCCGACCCTCGGGCGATGGTTTATTCCGGCCACCAGTTC  >  NC_002947/5784948‑5785242

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.