New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5962157 =	62 (1.260)	3 (0.060)	3/246	NT	5.1%	coding (1053/1248 nt)	lysA‑II	diaminopimelate decarboxylase
	?	NC_002947	5962207 =	51 (1.080)					coding (1103/1248 nt)	lysA‑II	diaminopimelate decarboxylase

ATCGATGCAGCGATGAACGACCTGATCCGCCCGGCCCTGTACCAGGCCTGGATGGGTGTCAGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAG  >  NC_002947/5962011‑5962293                                                                                                                                                   |                                                                                                                                         atcGATGCAGCGATGAACGACCTGATCCGCCCGGCCCTGTACCAGGCCTGGATGGGTGTCAGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGAcc                                                                                                                                         <  4:278061/148‑1 (MQ=255)   actccggcagcaggctttcgccagcatacagttcggcgacggtctcgcggcggcgtacttcgaacgcctggtcgccgtcgaccaggatttcagcgcaacggccgcgggtgttgtagttggagctcatgacaaaaccataggcgcc                                                                                                                                          >  7:106516‑M1/145‑145 (MQ=255)   actccggcagcaggctttcgccagcatacagttcggcgacggtctcgcggcggcgtacttcgaacgcctggtcgccgtcgaccaggatttcagcgcaacggccgcgggtgttgtagttggagctcatgacaaaaccataggcgcc                                                                                                                                          <  8:106516‑M1/1‑1 (MQ=255)   actccggcagcaggctttcgccagcatacagttcggcgacggtctcgcggcggcgtacttcgaacgcctggtcgccgtcgaccaggatttcagcgcaacggccgcgggtgttgtagttggagctcatgacaaaaccataggcgcCcgcg                                                                                                                                      <  6:316135‑M1/5‑1 (MQ=255)   actccggcagcaggctttcgccagcatacagttcggcgacggtctcgcggcggcgtacttcgaacgcctggtcgccgtcgaccaggatttcagcgcaacggccgcgggtgttgtagttggagctcatgacaaaaccataggcgcCcgcg                                                                                                                                      <  4:273410‑M1/5‑1 (MQ=255)   actccggcagcaggctttcgccagcatacagttcggcgacggtctcgcggcggcgtacttcgaacgcctggtcgccgtcgaccaggatttcagcgcaacggccgcgggtgttgtagttggagctcatgacaaaaccataggcgcCcgc                                                                                                                                       >  6:144462‑M1/145‑148 (MQ=255)     aTGCAGCGATGAACGACCTGATCCGCCCGGCCCTGTACCAGGCCTGGATGGGTGTCAGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTc                                                                                                                                    <  1:123631/149‑1 (MQ=255)      tGCAGCGATGAACGACCTGATCCGCCCGGCCCTGTACCAGGCCTGGATGGGTGTCAGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTcc                                                                                                                                   <  3:26848/149‑1 (MQ=255)         aGCGATGAACGACCTGATCCGCCCGGCCCTGTACCAGGCCTGGATGGGTGTCAGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTc                                                                                                                                 >  5:169521/1‑148 (MQ=255)          gCGATGAACGACCTGATCCGCCCGGCCCTGTACCAGGCCTGGATGGGTGTCAGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCaa                                                                                                                               >  3:216551/1‑149 (MQ=255)             aTGAACGACCTGATCCGCCCGGCCCTGTACCAGGCCTGGATGGGTGTCAGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCt                                                                                                                            <  6:250631/149‑1 (MQ=255)                    aCCTGATCCGCCCGGCCCTGTACCAGGCCTGGATGGGTGTCAGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGaa                                                                                                                     <  3:97005/149‑1 (MQ=255)                     ccTGATCCGCCCGGCCCTGTACCAGGCCTGGATGGGTGTCAGCGCGGTCAAGCCCCGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCACCCTGGCCGAAg                                                                                                                    >  4:88111/1‑149 (MQ=255)                     ccTGATCCGCCCGGCCCTGTACCAGGCCTGGATGGGTGTCAGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAg                                                                                                                    <  8:102360/149‑1 (MQ=255)                     ccTGATCCGCCCGGCCCTGTACCAGGCCTGGATGGGTGTCAGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAg                                                                                                                    <  6:21989/149‑1 (MQ=255)                     ccTGATCCGCCCGGCCCTGTACCAGGCCTGGATGGGTGTCAGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCCGCGAGACTGGCGACTTCCTCGGCAAGGACcgc                                                                                                                                       <  7:19784/130‑1 (MQ=255)                     ccTGATCCGCCCGGCCCTGTACCAGGCCTGGATGGGTGTCAGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCAGCGAGACTGGCGACTTCCTCGGCAAGGACcgc                                                                                                                                       >  8:19784/1‑130 (MQ=255)                        gATCCGCCCGGCCCTGTACCAGGCCTGGATGGGTGTCAGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGt                                                                                                                  >  2:61812/1‑148 (MQ=255)                          tCCGCCCGGCCCTGTACCAGGCCTGGATGGGTGTCAGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGAc                                                                                                               <  4:216551/149‑1 (MQ=255)                             gCCCGGCCCTGTACCAGGCCTGGATGGGTGTCAGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACctg                                                                                                            >  3:86313/1‑149 (MQ=255)                                 ggCCCTGTACCAGGCCTGGATGGGTGTCAGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTgg                                                                                                        <  3:89855/149‑1 (MQ=255)                                     cTGTACCAGGCCTGGATGGGTGTCAGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGt                                                                                                    <  6:169521/149‑1 (MQ=255)                                                cTGGATGGGTGTCAGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCcgc                                                                                           >  6:206980/1‑147 (MQ=255)                                                cTGGATGGGTGTCAGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCcgc                                                                                           <  5:206980/147‑1 (MQ=255)                                                cTGGATGGGTGTCAGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCgg                                                                                         >  7:100728/1‑149 (MQ=255)                                                cTGGATGGGTGTCAGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCgg                                                                                         >  1:165292/1‑149 (MQ=255)                                                     tGGGTGTCAGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGcc                                                                                    >  6:297985/1‑149 (MQ=255)                                                        gtgtCAGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTAt                                                                                 <  7:210049/149‑1 (MQ=255)                                                         gtacttcgaacgcctggtcgccgtcgaccaggatttcagcgcaacggccgcgggtgttgtagttggagctcatgacaaaaccataggcgcCCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATg                                                                                >  5:316135‑M1/91‑149 (MQ=255)                                                             aGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTCCGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAg                                                                                                                    >  5:15058/1‑109 (MQ=255)                                                             aGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAg                                                                                                                    <  6:15058/109‑1 (MQ=255)                                                             aGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTaga                                                                                                 >  1:286261/1‑128 (MQ=255)                                                             aGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTaga                                                                                                 <  2:286261/128‑1 (MQ=255)                                                             aGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCgg                                                                                         >  7:3213/1‑136 (MQ=255)                                                             aGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCgg                                                                                         <  8:3213/136‑1 (MQ=255)                                                                 cgGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTc                                                                        <  3:125119/149‑1 (MQ=255)                                                                    tCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTTCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATg                                                                     <  1:242322/149‑1 (MQ=255)                                                                    tCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATg                                                                     <  6:102133/149‑1 (MQ=255)                                                                         ccACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCAt                                                                      <  3:92888/143‑1 (MQ=255)                                                                         ccACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCAt                                                                      >  4:92888/1‑143 (MQ=255)                                                                                cAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTac                                                         <  6:53006/149‑1 (MQ=255)                                                                                 aGGCGGAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTac                                                         >  7:287100/1‑148 (MQ=255)                                                                                  ggCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTacaa                                                       >  3:247144/1‑149 (MQ=255)                                                                                           cgcgCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCcgcg                                               >  7:130467/1‑148 (MQ=255)                                                                                           cgcgCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGCCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCcgcg                                               <  8:130467/148‑1 (MQ=255)                                                                                               gcgcaacggccgcgggtgttgtagttggagctcatgacaaaaccataggcgcCCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCgg                                                                                         <  5:189121‑M1/50‑1 (MQ=255)                                                                                               gcgcaacggccgcgggtgttgtagttggagctcatgacaaaaccataggcgcCCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCgg                                                                                         >  6:189121‑M1/53‑102 (MQ=255)                                                                                                       cTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTg                                   >  4:296892/1‑148 (MQ=255)                                                                                                         ggTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGaaa                                >  4:180859/1‑149 (MQ=255)                                                                                                             ggCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCt                            <  4:86313/149‑1 (MQ=255)                                                                                                              gCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTg                           >  5:160465/1‑149 (MQ=255)                                                                                                               cccTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGGTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTgg                          <  2:165292/149‑1 (MQ=255)                                                                                                                 cTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTc                        >  8:68591/1‑149 (MQ=255)                                                                                                                 cTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTc                        <  4:301155/149‑1 (MQ=255)                                                                                                                        cGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCg                 <  1:61812/149‑1 (MQ=255)                                                                                                                          agaCTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGAc               >  6:112241/1‑149 (MQ=255)                                                                                                                             cTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAg            <  6:157156/149‑1 (MQ=255)                                                                                                                              tGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCt                                    <  7:120522/124‑1 (MQ=255)                                                                                                                              tGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCt                                    >  8:120522/1‑124 (MQ=255)                                                                                                                              tGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAgg           >  6:281643/1‑149 (MQ=255)                                                                                                                              tGGCGACTTCCTCGGCAAGGACCGCGGCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAg            >  6:69942/1‑148 (MQ=255)                                                                                                                                gCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAACGCCTGGTCGCCGTCGACCAggat         >  5:252342/1‑147 (MQ=255)                                                                                                                                gCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCg         <  8:287100/149‑1 (MQ=255)                                                                                                                                gCGACTTCCTCGGCAAGGACCGCGGCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAg            <  5:69942/146‑1 (MQ=255)                                                                                                                                    cTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCg     <  7:68591/149‑1 (MQ=255)                                                                                                                                       ccTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGc                                                                  >  6:153245/1‑85 (MQ=255)                                                                                                                                       ccTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGc                                                                  <  5:153245/85‑1 (MQ=255)                                                                                                                                       ccTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGaa   <  5:297985/148‑1 (MQ=255)                                                                                                                                       ccTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGa    <  3:180859/147‑1 (MQ=255)                                                                                                                                       ccTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAg  >  1:301157/1‑149 (MQ=255)                                                                                                                                        cTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAg  >  3:273410/1‑148 (MQ=255)                                                                                                                                         tCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGaa   >  2:239589/1‑146 (MQ=255)                                                                                                                                         tCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGaa   <  1:239589/146‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                         ATCGATGCAGCGATGAACGACCTGATCCGCCCGGCCCTGTACCAGGCCTGGATGGGTGTCAGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAG  >  NC_002947/5962011‑5962293

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.