New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5962157 =	62 (1.260)	3 (0.060)	3/246	NT	5.1%	coding (1053/1248 nt)	lysA‑II	diaminopimelate decarboxylase
	?	NC_002947	5962207 =	51 (1.080)					coding (1103/1248 nt)	lysA‑II	diaminopimelate decarboxylase

TGGGTGTCAGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGT  >  NC_002947/5962063‑5962350                                                                                                                                                 |                                                                                                                                                tGGGTGTCAGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGcc                                                                                                                                             >  6:297985/1‑149 (MQ=255)    gtgtCAGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTAt                                                                                                                                          <  7:210049/149‑1 (MQ=255)     gtacttcgaacgcctggtcgccgtcgaccaggatttcagcgcaacggccgcgggtgttgtagttggagctcatgacaaaaccataggcgcCCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATg                                                                                                                                         >  5:316135‑M1/91‑149 (MQ=255)             cgGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTc                                                                                                                                 <  3:125119/149‑1 (MQ=255)                tCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTTCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATg                                                                                                                              <  1:242322/149‑1 (MQ=255)                tCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATg                                                                                                                              <  6:102133/149‑1 (MQ=255)                     ccACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCAt                                                                                                                               >  4:92888/1‑143 (MQ=255)                     ccACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCAt                                                                                                                               <  3:92888/143‑1 (MQ=255)                            cAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTac                                                                                                                  <  6:53006/149‑1 (MQ=255)                             aGGCGGAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTac                                                                                                                  >  7:287100/1‑148 (MQ=255)                              ggCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTacaa                                                                                                                >  3:247144/1‑149 (MQ=255)                                       cgcgCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCcgcg                                                                                                        >  7:130467/1‑148 (MQ=255)                                       cgcgCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGCCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCcgcg                                                                                                        <  8:130467/148‑1 (MQ=255)                                                   cTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTg                                                                                            >  4:296892/1‑148 (MQ=255)                                                     ggTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGaaa                                                                                         >  4:180859/1‑149 (MQ=255)                                                         ggCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCt                                                                                     <  4:86313/149‑1 (MQ=255)                                                          gCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTg                                                                                    >  5:160465/1‑149 (MQ=255)                                                           cccTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGGTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTgg                                                                                   <  2:165292/149‑1 (MQ=255)                                                             cTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTc                                                                                 >  8:68591/1‑149 (MQ=255)                                                             cTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTc                                                                                 <  4:301155/149‑1 (MQ=255)                                                                    cGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCg                                                                          <  1:61812/149‑1 (MQ=255)                                                                      agaCTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGAc                                                                        >  6:112241/1‑149 (MQ=255)                                                                         cTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAg                                                                     <  6:157156/149‑1 (MQ=255)                                                                          tGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCt                                                                                             >  8:120522/1‑124 (MQ=255)                                                                          tGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCt                                                                                             <  7:120522/124‑1 (MQ=255)                                                                          tGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAgg                                                                    >  6:281643/1‑149 (MQ=255)                                                                          tGGCGACTTCCTCGGCAAGGACCGCGGCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAg                                                                     >  6:69942/1‑148 (MQ=255)                                                                            gCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAACGCCTGGTCGCCGTCGACCAggat                                                                  >  5:252342/1‑147 (MQ=255)                                                                            gCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCg                                                                  <  8:287100/149‑1 (MQ=255)                                                                            gCGACTTCCTCGGCAAGGACCGCGGCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAg                                                                     <  5:69942/146‑1 (MQ=255)                                                                                cTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCg                                                              <  7:68591/149‑1 (MQ=255)                                                                                   ccTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGc                                                                                                                           <  5:153245/85‑1 (MQ=255)                                                                                   ccTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGc                                                                                                                           >  6:153245/1‑85 (MQ=255)                                                                                   ccTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGaa                                                            <  5:297985/148‑1 (MQ=255)                                                                                   ccTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGa                                                             <  3:180859/147‑1 (MQ=255)                                                                                   ccTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAg                                                           >  1:301157/1‑149 (MQ=255)                                                                                    cTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAg                                                           >  3:273410/1‑148 (MQ=255)                                                                                     tCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGaa                                                            <  1:239589/146‑1 (MQ=255)                                                                                     tCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGaa                                                            >  2:239589/1‑146 (MQ=255)                                                                                      cataggcgcccgcggactctacggccagcaggtcaccttcggccaggttgaggacgcggGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTAc                                                        >  5:316135‑M2/60‑149 (MQ=255)                                                                                               ccgcggactctacggccagcaggtcaccttcggccaggttgaggacgcggGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTgcgc                                                                                              >  6:189121‑M2/51‑102 (MQ=255)                                                                                               ccgcggactctacggccagcaggtcaccttcggccaggttgaggacgcggGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTgcgc                                                                                              <  5:189121‑M2/52‑1 (MQ=255)                                                                                                CGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCga                                              >  3:296892‑M1/1‑149 (MQ=255)                                                                                                    tCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGAcc                                          <  5:112241/149‑1 (MQ=255)                                                                                                     ccTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCg                                         >  4:19864/1‑149 (MQ=255)                                                                                                      cTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCgaga                                            <  5:51227/145‑1 (MQ=255)                                                                                                      cTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCgaga                                            >  6:51227/1‑145 (MQ=255)                                                                                                       tCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTc                                       >  6:152764/1‑149 (MQ=255)                                                                                                               gCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGaa                                 <  3:88111/147‑1 (MQ=255)                                                                                                                  gAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTa                            >  3:115032/1‑149 (MQ=255)                                                                                                                    aGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATg                          <  4:115032/149‑1 (MQ=255)                                                                                                                                 gCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGc               <  8:100728/147‑1 (MQ=255)                                                                                                                                 gCCGTAGAGTCCGCGGGCGCCTATGGGTTTGGCATGAGCTCCAACTACACCACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCct             <  5:247541/149‑1 (MQ=255)                                                                                                                                   cGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTg                                                                                    <  1:288657/76‑1 (MQ=255)                                                                                                                                   cGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTg                                                                                    >  2:288657/1‑76 (MQ=255)                                                                                                                                    gTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCctgct          <  5:281643/149‑1 (MQ=255)                                                                                                                                     tAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCctgctg         >  1:84634/1‑149 (MQ=255)                                                                                                                                            cgcggGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGt  <  4:273410‑M2/144‑1 (MQ=255)                                                                                                                                            cgcggGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGt  <  6:316135‑M2/144‑1 (MQ=255)                                                                                                                                             gcggGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGt  >  6:144462‑M2/5‑148 (MQ=255)                                                                                                                                                gGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGt  <  8:106516‑M2/144‑1 (MQ=255)                                                                                                                                                gGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGt  >  7:106516‑M2/2‑145 (MQ=255)                                                                                                                                                 |                                                                                                                                                TGGGTGTCAGCGCGGTCAAGCCACGTGCAGGCGAAGGCCGCGCCTACGACCTGGTCGGCCCTATCTGCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCTATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGT  >  NC_002947/5962063‑5962350

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.