New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 741470 =NA (NA)7 (0.150) 7/248 NT 10.9% intergenic (+70/‑430) PP_t12/PP_0635 tRNA‑Thr/group II intron‑encoding maturase
?NC_002947 2069163 = 59 (1.200)intergenic (+10/‑464) PP_t19/PP_1846 tRNA‑Ser/group II intron‑encoding maturase

TCACTAAATTAGCGCACCTCGACAGGCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGT  >  NC_002947/2069017‑2069307
                                                                                                                                                  |                                                                                                                                                
ttcgcggtcacccgcgacacccttgcctccggctaacacttccccttgccgggtgtgtagaggactttcacctccaagtcacccacttggccaccacaaccaagcgggttgcgcttacgcgcaacgcgccatgcctggcgcacacaaa                                                                                                                                                 >  1:36972‑M2/147‑148 (MQ=255)
  gcggtcacccgcgacacccttgcctccggctaacatcttccccttgccgggtgtgtagaggactttcacctccaagtcacccacttggccaccacaaccaagcgggttgcgcttacgcgcaacgcgccatgcctggcgcacacaAAAAg                                                                                                                                              >  1:47895‑M2/145‑149 (MQ=255)
   gcggtcacccgcgacacccttgcctccggctaacacttccccttgccgggtgtgtagaggactttcacctccaagtcacccacttggccaccacaaccaagcgggttgcgcttacgcgcaacgcgccatgcctggcgcacacaAAAAGc                                                                                                                                             >  8:144416‑M2/144‑149 (MQ=255)
    tAAATTAGCGCACCTCGACAGGCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGcc                                                                                                                                            >  5:271788/1‑149 (MQ=255)
    tAAATTAGCGCACCTCGACAGGCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGcc                                                                                                                                            >  6:78852/1‑149 (MQ=255)
    tAAATTAGCGCACCTCGACAGGCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGcc                                                                                                                                            >  2:139584/1‑149 (MQ=255)
    cggtcacccgcgacacccttgcctccggctaacacttccccttgccgggtgtgtagaggactttcacctccaagtcacccacttggccaccacaaccaagcgggttgcgcttacgcgcaacgcgccatgcctggcgcacacaAAAAg                                                                                                                                              <  2:71964‑M2/5‑1 (MQ=255)
    cggtcacccgcgacacccttgcctccggctaacacttccccttgccgggtgtgtagaggactttcacctccaagtcacccacttggccaccacaaccaagcgggttgcgcttacgcgcaacgcgccatgcctggcgcacacaAAAAg                                                                                                                                              >  1:71964‑M2/143‑147 (MQ=255)
      aaTTAGCGCACCTCGACAGGCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGcccc                                                                                                                                          >  6:299208/1‑149 (MQ=255)
       aTTAGCGCACCTCGACAGGCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGccccc                                                                                                                                         >  5:258214/1‑149 (MQ=255)
           gcgcACCTCGACAGGCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGc                                                                                                                                             <  8:155760/141‑1 (MQ=255)
           gcgcACCTCGACAGGCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGc                                                                                                                                             >  7:155760/1‑141 (MQ=255)
              cACCTCGACAGGCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTg                                                                                                                                   >  1:66185/1‑148 (MQ=255)
                 cTCGACAGGCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGaaaa                                                                                                                               <  5:299208/149‑1 (MQ=255)
                       aGGCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACgg                                                                                                                         >  7:222973/1‑149 (MQ=255)
                         cctctggctaacacttccccttgccgggtgtgtagaggactttcacctccaagtcacccacttggccaccacaaccaagcgggttgcgcttacgcgcaacgcgccatgcctggcgcacacaAAAAGCCCCCGCGCTGAAAAGTACgggg                                                                                                                       <  6:296973‑M2/28‑1 (MQ=255)
                               aGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCtttt                                                                                                                 <  3:6277/149‑1 (MQ=255)
                                 taacacttccccttgccgggtgtgtagaggactttcacctccaagtcacccacttggccaccacaaccaagcgggttgcgcttacgcgcaacgcgccatgcctggcgcacacaAAAAGCCCCCGCGCTGAAAAGTACGGGGGc                                                                                                                     <  1:188356‑M2/30‑1 (MQ=255)
                                 taacacttccccttgccgggtgtgtagaggactttcacctccaagtcacccacttggccaccacaaccaagcgggttgcgcttacgcgcaacgcgccatgcctggcgcacacaAAAAGCCCCCGCGCTGAAAAGTACGGGGGc                                                                                                                     >  2:188356‑M2/114‑143 (MQ=255)
                                 gCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTtg                                                                                                               <  2:293237/149‑1 (MQ=255)
                                  cTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTtgt                                                                                                              <  2:66185/149‑1 (MQ=255)
                                    tGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTtgtgt                                                                                                            >  8:161124/1‑149 (MQ=255)
                                           aaaCGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAg                                                                                                     >  8:40571/1‑149 (MQ=255)
                                            aaCGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAgg                                                                                                    >  1:253717/1‑149 (MQ=255)
                                                 tGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATgg                                                                                               <  8:222973/149‑1 (MQ=255)
                                                   aaGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACAATCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGgc                                                                                              <  5:78852/148‑1 (MQ=255)
                                                       tgtagaggactttcacctccaagtcacccacttggccaccacaaccaagcgggttgcgcttacgcgcaacgcgccatgcctggcgcacacaAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTtgt                                                                                                              >  4:253030‑M2/92‑128 (MQ=255)
                                                       tgtagaggactttcacctccaagtcacccacttggccaccacaaccaagcgggttgcgcttacgcgcaacgcgccatgcctggcgcacacaAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTtgt                                                                                                              <  3:253030‑M2/37‑1 (MQ=255)
                                                         ccGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTtgt                                                                                                              <  6:300486/126‑1 (MQ=255)
                                                         ccGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTtgt                                                                                                              >  5:300486/1‑126 (MQ=255)
                                                          cGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTATTTGTGTGCGCCAGGCATGGCGAGTTgcg                                                                                      >  8:171277/1‑149 (MQ=255)
                                                           gaggactttcacctccaagtcacccacttggccaccacaaccaagcgggttgcgcttacgcgcaacgcgccatgcctggcgcacacaAAAAGCCCCCGCGCTGAAAAGTACggggg                                                                                                                      >  7:245338‑M2/88‑116 (MQ=255)
                                                           gaggactttcacctccaagtcacccacttggccaccacaaccaagcgggttgcgcttacgcgcaacgcgccatgcctggcgcacacaAAAAGCCCCCGCGCTGAAAAGTACggggg                                                                                                                      <  8:245338‑M2/29‑1 (MQ=255)
                                                             gTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGt                                                                                   <  4:261844/149‑1 (MQ=255)
                                                                gTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCATCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAg                                                                                >  1:251587/1‑149 (MQ=255)
                                                                 tCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAgc                                                                               <  2:253717/149‑1 (MQ=255)
                                                                   gAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAACAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAgcg                                                                              >  8:221803/1‑148 (MQ=255)
                                                                   gAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAgcg                                                                              >  1:113587/1‑148 (MQ=255)
                                                                    aaGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGcc                                                                                                       >  2:292780/1‑122 (MQ=255)
                                                                    aaGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGcc                                                                                                       <  1:292780/122‑1 (MQ=255)
                                                                       gAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCATCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAAcc                                                                         <  2:251587/149‑1 (MQ=255)
                                                                           aCGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCt                                                                     >  2:16228/1‑149 (MQ=255)
                                                                            cGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCaa                                                                           <  8:178851/142‑1 (MQ=255)
                                                                            cGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCaa                                                                           >  7:178851/1‑142 (MQ=255)
                                                                            cGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGCGTTCAAATCCCTTCTTCACCGCGACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGCGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCtt                                                                    <  7:171277/149‑1 (MQ=255)
                                                                              ccTGGATAGTGTGTATACGAGAAATCGTATCAAGTGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTgg                                                                  <  6:258214/149‑1 (MQ=255)
                                                                                  gAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTtgt                                                              <  1:16228/149‑1 (MQ=255)
                                                                                     aGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTgtggt                                                           <  6:271788/149‑1 (MQ=255)
                                                                                       tgtgtATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGtggtgg                                                         >  1:171886/1‑149 (MQ=255)
                                                                                              aCGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTg                                                  >  2:47895/1‑149 (MQ=255)
                                                                                                  gaAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGt                                               >  1:125477/1‑148 (MQ=255)
                                                                                                     aTCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACt                                           >  3:40252/1‑149 (MQ=255)
                                                                                                      tCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACtt                                          <  4:262779/149‑1 (MQ=255)
                                                                                                        gTATCAAGGGTTCAAATCCCTTCTTCACCGCCACACTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTg                                         <  6:114857/148‑1 (MQ=255)
                                                                                                           tCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAgg                                     <  2:171886/149‑1 (MQ=255)
                                                                                                           tCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAgg                                     >  3:294154/1‑149 (MQ=255)
                                                                                                             aaGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGt                                    >  6:154563/1‑148 (MQ=255)
                                                                                                             aaGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGt                                    >  1:147337/1‑148 (MQ=255)
                                                                                                              aGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTg                                   >  3:171063/1‑148 (MQ=255)
                                                                                                                ggTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGaaa                                <  5:154563/149‑1 (MQ=255)
                                                                                                                ggTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGa                                  >  2:36972/1‑147 (MQ=255)
                                                                                                                     aaaTCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCct                           <  2:113587/149‑1 (MQ=255)
                                                                                                                       aTCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCctct                         <  1:139584/149‑1 (MQ=255)
                                                                                                                       aTCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCctc                          >  7:77000/1‑148 (MQ=255)
                                                                                                                        tCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTa                        <  2:147337/149‑1 (MQ=255)
                                                                                                                               ttcACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTtgt                                                                                                              <  5:130469/56‑1 (MQ=255)
                                                                                                                               ttcACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTtgt                                                                                                              >  6:130469/1‑56 (MQ=255)
                                                                                                                                 cACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCctc                          >  4:284804/1‑138 (MQ=255)
                                                                                                                                 cACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCctc                          <  3:284804/138‑1 (MQ=255)
                                                                                                                                   ccGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCACGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGc              >  6:155934/1‑148 (MQ=255)
                                                                                                                                    cGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGc              >  7:144416/1‑147 (MQ=255)
                                                                                                                                              tACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAgtgt  >  5:150407/1‑149 (MQ=255)
                                                                                                                                                cGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGa                                       <  1:246957/110‑1 (MQ=255)
                                                                                                                                                cGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGa                                       >  2:246957/1‑110 (MQ=255)
                                                                                                                                                cGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACAccc                 <  4:20288/132‑1 (MQ=255)
                                                                                                                                                cGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACAccc                 >  3:20288/1‑132 (MQ=255)
                                                                                                                                                cGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAgtgt  <  7:161124/147‑1 (MQ=255)
                                                                                                                                                cGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAgtgt  <  4:294154/147‑1 (MQ=255)
                                                                                                                                                 gAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTtgtg                                                             <  5:100057/87‑1 (MQ=255)
                                                                                                                                                 gAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTtgtg                                                             >  6:100057/1‑87 (MQ=255)
                                                                                                                                                  |                                                                                                                                                
TCACTAAATTAGCGCACCTCGACAGGCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGT  >  NC_002947/2069017‑2069307

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.