| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1420319 | 52 (1.050) | 4 (0.090) | 4/242 | NT | 7.5% | intergenic (‑279/‑202) | PP_mr17/PP_1245 | C4 ncRNA/hypothetical protein |
| ? | NC_002947 | = 1420345 | 50 (1.070) | intergenic (‑305/‑176) | PP_mr17/PP_1245 | C4 ncRNA/hypothetical protein | |||||
TAGAAGTTGTAGGACGGATTTCTACTAATCAATCAGACAGGCTTCCTGCAACATTTTGTCTTGAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTCCCCCTGCGCCCCTCGCTGGACGGCTGAATTGTCGTCTGCGGCCAGTGCTGCACACTTTCTGAAAACCCCGCACAAACTCGAATGC > NC_002947/1420199‑1420489 | tAGAAGTTGTAGGACGGATTTCTACTAATCAATCAGACAGGCTTCCTGCAACATTTTGTCTTGAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGct < 3:25896‑M2/149‑3 (MQ=255) aGAAGTTGTAGGACGGATTTCTACTAATCAATCAGACAGGCTTCCTGCAACATTTTGTCTTGAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGctg < 3:104555‑M2/149‑4 (MQ=255) gAAGTTGTAGGACGGATTTCTACTAATCAATCAGACAGGCTTCCTGCAACATTTTGTCTTGAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGctgg > 1:242414‑M2/1‑145 (MQ=255) gTTGTAGGACGGATTTCTACTAATCAATCAGACAGGCTTCCTGCAACATTTTGTCTTGAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGctgggc < 8:189451‑M2/148‑7 (MQ=255) ggACGGATTTCTACTAATCAATCAGACAGGCTTCCTGCAACATTTTGTCTTGAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAAc > 7:169330/1‑149 (MQ=255) ggATTTCTACTAATCAATCAGACAGGCTTCCTGCAACATTTTGTCTTGAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCtt > 6:93803/1‑149 (MQ=255) ggATTTCTACTAATCAATCAGACAAGCTTCCTGCAACATTTTGTCTTGAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCtt > 6:264907/1‑149 (MQ=255) gATTTCTACTAATCAATCAGACAGGCTTCCTGCAACATTTTGTCTTGAACTGCCAATGGTACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTc < 2:16781/149‑1 (MQ=255) aTTTCTACTAATCAATCAGACAGGCTTCCTGCAACATTTTGTCTTGAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTcc > 6:157120/1‑149 (MQ=255) atcaGACAGGCTTCCTGCAACATTTTGTCTTGAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGt > 2:249025/1‑149 (MQ=255) tcaGACAGGCTTCCTGCAACATTTTGTCTTGAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGtt < 5:93803/149‑1 (MQ=255) aGACAGGCTTCCTGCAACATTTTGTCTTGAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTg < 4:104555/148‑1 (MQ=255) gCTTCCTGCAACATTTTGTCTTGAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCtt < 3:294317/149‑1 (MQ=255) ttCCTGCAACATATTGTCATGAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCAGATACGCAACTCACGCCCAGTACACACGCCGTAAAGATTACCCGCGCTGGGCGATGAACTCATCCTGACATGGATTCGTTGGATGCtatt > 2:278361/1‑146 (MQ=255) tGCAACATTTTGTCTTGAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTc < 7:212051/132‑1 (MQ=255) tGCAACATTTTGTCTTGAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTc > 8:212051/1‑132 (MQ=255) cAACATTTTGTCTTGAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCGCGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGt < 3:191784/132‑1 (MQ=255) cAACATTTTGTCTTGAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCGCGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGt > 4:191784/1‑132 (MQ=255) aaCATTTTGTCTTGAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCCGACATGGATTCGTTGGATGCTTTGCGCCGTa > 5:53489/1‑149 (MQ=255) aCATTTTGTCTTGAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTAc < 5:157120/149‑1 (MQ=255) aTTTTGTCTTGAACTGCCAAGGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTg < 5:315216/149‑1 (MQ=255) tGTCTTGAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGtc < 7:189451/148‑1 (MQ=255) tCTTGAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTcc > 4:140123/1‑149 (MQ=255) tCTTGAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTcc < 5:264907/149‑1 (MQ=255) cTTGAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTccc > 8:170704/1‑149 (MQ=255) gAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTCCCCCt > 4:45228/1‑149 (MQ=255) cTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTCCCCCTgcg > 3:310783/1‑149 (MQ=255) ccAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTc < 4:296246/110‑1 (MQ=255) ccAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTc > 3:296246/1‑110 (MQ=255) ccAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTCCCCCTGCGccc > 3:128905/1‑149 (MQ=255) cACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTCCCCCTGCGCCCCTCGCTg < 5:84450/149‑1 (MQ=255) aCCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTCCCCCTGCGCCCCTCGCTg > 2:227552/1‑148 (MQ=255) gtcTACAATGCGTCTCTCTGATACTCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTCCCCCTGCGCCCCTCGCTGGACGGCt < 4:25896/147‑1 (MQ=255) gCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTCCCCCTGCGCCCATCGCTGGACGGCt > 7:177815/1‑148 (MQ=255) tACAATGCGGCGCTCTGATACGGCACTCACTCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTACTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTCCCCCTGCGCCCCTCGCTGGACGGCTGaa < 5:194542/149‑1 (MQ=255) cgtggcggcgCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTCCCCCTGCGCCCCTCGCTGGACGGCTGAAtt < 2:158954/145‑1 (MQ=255) cAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTCCCCCTGCGCCCCTCGCTGGACGGCTGaa < 7:170704/147‑1 (MQ=255) aaTGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTCCCCCTGCGCCCCTCGCTGGACGGCTGAATTg < 5:86542/149‑1 (MQ=255) aaTGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATGCGTTGGATGCTTTGCGCCGTACTGGTCTCCCCCTGCGCCCCTCGCTGGACGGCTGAATTg < 7:272289/149‑1 (MQ=255) tGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTCCCCCTGCGCCCCTCGCTGGCCGGCTGAATTGTCGTCTGCGGc > 7:49769/1‑148 (MQ=255) aCGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTCCCCCTgc > 4:10378/1‑109 (MQ=255) aCGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTCCCCCTgc < 3:10378/109‑1 (MQ=255) cgaCTGACGCCCAGGCCACACGCAGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTCCCCCTGCGCCCCTCGCTGGACGGCTGAATTGTCGTCTGCGGCCAGtgctg < 8:177815/147‑1 (MQ=255) ccACTCACGCGCAGGCCACACGCCGTAATTATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTCCCCCTGCGCCCCTAGCTGGACGGCTGAATTGTCGTCTGCGGCAAGtgctg < 1:278361/149‑1 (MQ=255) cACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTCCCCCTGCGCCCCTCGCTGGACGGCTGAATTGTCGTCTGCGGCCAGtgctgc < 4:310783/149‑1 (MQ=255) cTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGctgggcgtgagtggcgtatcagagcgccgcattgtagcccaaggtgccattggcagttcaagacaaaatgttgcaggaagcctgtc < 6:190021‑M2/123‑87 (MQ=255) cTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGctgggcgtgagtggcgtatcagagcgccgcattgtagcccaaggtgccattggcagttcaagacaaaatgttgcaggaagcctgtc > 5:190021‑M2/1‑37 (MQ=255) aCGCCCAGGCCACACGCCGTAATGATTACGCGCGctgggcgtgagtggcgtatcagagcgccgcattgtagcccaaggtgccattggcagttcaagacaaaatgttgcaggaagcctgtctgattgattagtagaaatccgtcctacaa < 3:250376‑M2/149‑116 (MQ=255) gCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTCCCCCTGCGCCCCTCGCTGGACGGCTGAATTGTCGTATGCGGCCAGAGCTGCACACtt > 4:52897/1‑148 (MQ=255) cccAGGCCACACGCAGTAATGATTACGCGAGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTCCCCCTGCGCCCCTCGCTGGACGGCTGAATTGTCGTCTGCGGCCAGTGCTGCACACTTTc > 6:162857/1‑149 (MQ=255) cAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTCCCCCTGCGCCCCTCGCTGGACGGCTGAATTGTCGTCTGCGGCCAGTGCTGCACACTTTCTg < 5:162857/149‑1 (MQ=255) ccACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTCCCCCTGCGCCCCTCGCTGGACGGCTGAATTGTCGTCTGCGGCCAGTGCTGCACACTTTCTGaaaa < 1:227552/149‑1 (MQ=255) ccACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTCCCCCTGCGCCCCTCGCTGGACGGCTGAATTGTCGTCTGCGGCCAGTGCTGCACACTTCCTGaaaa < 3:140123/149‑1 (MQ=255) acGCCGTAATGATTACGCGCGctgggcgtgagtggcgtatcagagcgccgcattgtagcccaaggtgccattggcagttcaagacaaaatgttgcaggaagcctgtctgattgattagtagaaatccgtcctacaacttctactcagaa > 4:250376‑M2/1‑21 (MQ=255) cGTAATGATTACGCGCGCTGGGAGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTCCCCCTGCGCCCCTCGCTGGACGGCTGAATTGTCGTCTGCGGCCAGTGCTGCACACTTTCTGAAAACCCCGca > 6:173774/1‑148 (MQ=255) aaTGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTCCCCCTGCGCCCCTCGCTGGACGGCTGAATTGTCGTCTGCGGCCAGTGCTGCACACTTTCTGAAAACCCCGCACaaa > 7:120327/1‑149 (MQ=255) aCGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTCCCCCTGCGCCCCTCGCTGGACGGCTGAATTGTCGTCTGCGGCCAGTGCTGCACACTTTCTGAAAACCCCGCACAAACTCGaa < 3:45228/148‑1 (MQ=255) cgcgcgCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTCCCCCTGCGCCCCTCGCTGGACGGCTGAATTGTCGTCTGCGGCCAGTGCTGCACACTTTCTGAAAACCCCGCACAAACTCGAAt < 8:169330/148‑1 (MQ=255) gcgcgcTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTCCCCCTGCGCCCCTCGCTGGACGGCTGAATTGTCGTCTGCGGCCAGTGCTGCACACTTTCTGAAAACCCCGCACAAACTCGAAtgc > 8:6470/1‑149 (MQ=255) | TAGAAGTTGTAGGACGGATTTCTACTAATCAATCAGACAGGCTTCCTGCAACATTTTGTCTTGAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGGCCACACGCCGTAATGATTACGCGCGCTGGGCGATGAACTCTTCCTGACATGGATTCGTTGGATGCTTTGCGCCGTACTGGTCTCCCCCTGCGCCCCTCGCTGGACGGCTGAATTGTCGTCTGCGGCCAGTGCTGCACACTTTCTGAAAACCCCGCACAAACTCGAATGC > NC_002947/1420199‑1420489 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |