New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1733577	37 (0.750)	4 (0.090)	4/240	NT	10.7%	coding (293/2592 nt)	PP_1526	beta‑(1‑3)‑glucosyl transferase
	?	NC_002947	= 1733600	32 (0.690)					coding (270/2592 nt)	PP_1526	beta‑(1‑3)‑glucosyl transferase

CGACCACCACCCGCACCACGCTGCGCGACGTGTTGGCCAGCTGGATGGCCGTGGCAATTTCGCGCTCGTTGCGCTCCAGGTCCGGGCTGATCCATATCCCCAGCGTCACCCGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTGGGTGCCTTCCACGGTATAGATACGGATGCTGTCGGTCAGTTTGCTCAGTTGCTCCAGGTCCTGGCGCATTTCGTCGTCAGTGGGGTACTGACCCTTCTGTGGGCTTTCGCCCAGGCGGAACGGCGAATACGAAAAGCCAG  >  NC_002947/1733458‑1733748                                                                                                                                               |                                                                                                                                                     cGACCACCACCCGCACCACGCTGCGCGACGTGTTGGCCAGCTGGATGGCCGTGGCAATTTCGCGCTCGTTGCGCTCCAGGTCCGGGCTGATCCATATCCCCAGCGTCACCCGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGtcggcc                                                                                                                                                <  5:283170‑M2/149‑7 (MQ=255)    ccaccaccCGCACCACGCTGCGCGACGTGTTGGCCAGCTGGATGGCCGTGGCAATTTCGCGCTCGTTGCGCTCCAGGTCCGGGCTGATCCATATCCCCAGCGTCACCCGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTgg                                                                                                                                             <  8:75156/149‑1 (MQ=255)      accaccCGCACCACGCTGCGCGACGTGTTGGCCAGCTGGATGGCCGTGGCAATTTCGCGCTCGTTGCGCTCCAGGTCCGGGCTGATCCATATCCCCAGCGTCACCCGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTGGGt                                                                                                                                           >  2:272547/1‑149 (MQ=255)      accaccCGCACCACGCTGCGCGACGTGTTGGCCAGCTGGATGGCCGAGGCAAATTCGCGCTCGTTGCGCTCCAGGTCCGGGCTGATCCATATACCCACCGTCACACGCACGCCCAACTCCTCGGCCAGCCGCGCGACGTCGGCCTggct                                                                                                                                           >  8:219218/1‑147 (MQ=255)         accCGCACCACGCTGCGCGACGTGTTGGCCAGCTGGATGGCCGTGGCAATTTCGCGCTCGTTGCGCTCCAGGTCCGGGCTGATCCATATCCCCAGCGTCCCCCGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTgg                                                                                                                                             >  4:49164/1‑144 (MQ=255)         accCGCACCACGCTGCGCGACGTGTTGGCCAGCTGGATGGCCGTGGCAATTTCGCGCTCGTTGCGCTCCAGGTCCGGGCTGATCCATATCCCCAGCGTCACCCGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTgg                                                                                                                                             <  3:49164/144‑1 (MQ=255)            cGCACCACGCTGCGCGACGTGTTGGCCAGCTGGATGGCCGTGGCAATTTCGCGCTCGTTGCGCTCCAGGTCCGGGCTGATCCATATCCCCAGCGTCACCCGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTGGGTGCCTTc                                                                                                                                     >  4:72934/1‑149 (MQ=255)               accacGCTGCGCGACGTGTTGGCCAGCTGGATGGCCGTGGCAATTTCGCGCTCGTTGCGCTCCAGGTCCGGGCTGATCCATATCCCCAGCGTCACCCGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTGGGTGCCTTCCAc                                                                                                                                  <  4:47319/149‑1 (MQ=255)                ccacGCTGCGAGACGTGTTGGCCAGCTGGATGGCCGTGGCAATTTCGCGCTCGTTGCGCTCCAGGTCCGGGCTGATCCATATCCCCAGCGTCACCCGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCTGCCTGGGTGCCTTCCACg                                                                                                                                 <  7:219218/149‑1 (MQ=255)                   cGCTGCGCGACGTGTTGGCCAGCTGGATGGCCGTGGCAATTTCGCGCTCGTTGCGCTCCAGGTCCGGGCTGATCCATATCCCCAGCGTCACCCGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTGGGTGCCTTCCACGGta                                                                                                                              <  8:243184/149‑1 (MQ=255)                   cGCTGCGCGACGTGTTGGCCAGCTGGATGGCCGTGGCAATTTCGCGCTCGTTGCGCTCCAGGTCCGGGCTGATCCATATCCCCAGCGTCACCCGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTGGGTGCCTTCCACGGta                                                                                                                              <  3:50909/149‑1 (MQ=255)                    gCTGCGCGACGTGTTGGCCAGCTGGATGGCCGTGGCAATTTCGCGCTCGTTGCGCTCCAGGTCCGGGCTGATCCATATCCCCAGCGTCACCCGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTGGGTGCCTTCCACGGta                                                                                                                              >  2:130698/1‑148 (MQ=255)                          cgACGTGTTGGCCAGCTGGATGGCCGTGGCAATTTCGCGCTCGTTGCGCTCCAGGTCCGGGCTGATCCATATCCCCAGCCTCACCCGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTGGGTGCCTTCCACGGTATAGATAc                                                                                                                       <  6:159985/149‑1 (MQ=255)                                     ccAGCTGGATGGCCGTGGCAATTTCGCGCTCGTTGCGCTCCAGGTCCGGGCTGATCCATATCCCGAGCGTCACCCGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTGGGTGCCTTCCACGGTATAGATACGGATGCTGTCg                                                                                                            <  3:30135/149‑1 (MQ=255)                                            gATGGCCGTGGCAATTTCGCGCTCGTTGCGCTCCAGGTCCGGGCTGATCCATATCCCCAGCGTCACCCGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTGGGTGCCTTCCACGGTATAGATACGGATGCTGTCGGTCAGt                                                                                                      <  2:33969/148‑1 (MQ=255)                                                 ccGTGGCAATTTCGCGCTCGTTGCGCTCCAGGTCCGGGCTGATCCATATCCCCAGCGTCACCCGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTGGGTGCCTTCCACGGTATAGATACGGATGCTGTCGGTCAGTTTGCTc                                                                                                <  1:272547/149‑1 (MQ=255)                                                      gCAATTTCGCGCTCGTTGCGCTCCAGGTCCGGGCTGATCCATATCCCCAGCGTCACCCGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTGGGTGCCTTCCACGGTATAGATACGGATGCTGTCg                                                                                                            >  7:104365/1‑132 (MQ=255)                                                      gCAATTTCGCGCTCGTTGCGCTCCAGGTCCGGGCTGATCCATATCCCCAGCGTCACCCGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTGGGTGCCTTCCACGGTATAGATACGGATGCTGTCg                                                                                                            <  8:104365/132‑1 (MQ=255)                                                         aTTTCGCGCTCGTTGCGCTCCAGGTCCGGGCTGATCCATATCCCCAGCGTCACCCGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTGGGTGCCTTCCACGGTATAGATACGGATGCTGTCGGTCAGTTTGCTCAGTTGCTc                                                                                        <  5:257824/149‑1 (MQ=255)                                                              gcgcTCGTTGCGCTCCAGGTCCGGGCTGATCCATATCCCCAGCGTCACCCGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTGGGTGCCTTCCACGGTATAGATACGGATGCTGTCGGTCAGTTTGCTCAGTTGCTCCAGGt                                                                                   >  4:38829/1‑149 (MQ=255)                                                                            ccAGGTCCGGGCTGATCCATATCCCCAGCGTCACCCGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTGGGTGCCTTCCACGGTATAGATACGGATGCTGTCGGTCAGTTTGCTCAGTTGCTCCAGGTCCTGGCGCATTtcg                                                                     >  4:209441/1‑149 (MQ=255)                                                                             cAGGTCCGGGCTGATCCATATCCCCAGCGTCACCCGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTGGGTGCCTTCCACGGTATAGATACGGATGCTGTCGGTCAGTTTGCTCAGTTGCTCCAGGTCCTGGCGCATTtc                                                                      <  3:72934/147‑1 (MQ=255)                                                                                gTCCGGGCTGATCCATATCCCCAGCGTCACCCGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTGGGTGCCTTCCACGGTATAGATACGGATGCTGTCGGTCAGTTTGCTCAGTTGCTCCAGGTCCTGGCGCATTTcgtcgt                                                                 <  7:32811/149‑1 (MQ=255)                                                                                     ggCTGATCCATATCCCCAGCGTCACCCGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTGGGTGCCTTCCACGGTATAGATACGGATGCTGTCGGTCAGTTTGCTCAGTTGCTCCAGGTCCTGGCGCATTTCGTCGTCAGTg                                                            <  1:130698/149‑1 (MQ=255)                                                                                        tGATCCATATCCCCAGCGTCACCCGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTGGGTGCCTTCCACGGTATAGATACGGATGCTGTCGGTCAGTTTGCTCAGTTGCTCCAGGTCCTGGCGCATTTCGTCGTCAGTgggg                                                         >  1:178191/1‑149 (MQ=255)                                                                                          aTCCATATCCCCAGCGTCACCCGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTGGGTGCCTTCCACGGTATAGATACGGATGCTGTCGGTCAGttt                                                                                                    >  2:56028/1‑104 (MQ=255)                                                                                          aTCCATATCCCCAGCGTCACCCGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTGGGTGCCTTCCACGGTATAGATACGGATGCTGTCGGTCAGttt                                                                                                    <  1:56028/104‑1 (MQ=255)                                                                                             cATATCCCCAGCGTCACCCGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTGGGTGCCTTCCACGGTATAGATACGGATGCTGTCGGTCAGTTTGCTCAGTTGCTCCAGGTCCTGGCGCATTTCGTCGTCAGTGGGGTACt                                                     >  8:112959/1‑148 (MQ=255)                                                                                                   cccAGCGTCACCCGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTGGGTGCCTTCCACGGTATAGATACGGATGCTGTCGGTCAGTTTGCTCAGTTGCTCCAGGTCCTGGCGCATTTCGTCGTCAGTGGGGTACTGACCCtt                                              >  1:125591/1‑149 (MQ=255)                                                                                                   cccAGCGTCACCCGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTGGGTGCCTTCCACGGTATAGATACGGATGCTGTCGGTCAGTTTGCTCAGTTGCTCCAGGTCCTGGCGCATTTCGTCGTCAGTGGGGTACTGACCCtt                                              <  3:209441/149‑1 (MQ=255)                                                                                                               cGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGGCGGCCTGGGTGCCTTCCACGGTATAGATACGGATGCTGTCGGTCAGTTTGCTCAGTTGCTCCAGGTCCTGGCGCATTTCGTCGTCAGTGGTGTACTGACCCTTCTGTGGGCTTTc                                  <  3:38829/149‑1 (MQ=255)                                                                                                                gCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTGGGTGCCTTCCACGGTATAGATACGGATGCTGTCGGTCAGTTTGCTCAGTTGCTCCAGGTCCTGGCGCATTTCGTCGTCAGTGGGGTa                                                       >  4:294191/1‑127 (MQ=255)                                                                                                                gCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTGGGTGCCTTCCACGGTATAGATACGGATGCTGTCGGTCAGTTTGCTCAGTTGCTCCAGGTCCTGGCGCATTTCGTCGTCAGTGGGGTa                                                       <  3:294191/127‑1 (MQ=255)                                                                                                                 cAGGCCGAACTCCTCGGCCAGGCGCGGGACGtcggcctgcgggtgacgctggggatatggatcagcccggacctggagcgcaacgagcgcgaaattgccacggccatccagctggccaacacgtcgcgcagcgtggtgcgggtgg                                    <  3:36005‑M2/145‑115 (MQ=255)                                                                                                                 cAGGCCGAACTCCTCGGCCAGGCGCGGGACGtcggcctgcgggtgacgctggggatatggatcagcccggacctggagcgcaacgagcgcgaaattgccacggccatccagctggccaacacgtcgcgcagcgtggtgcgggtgg                                    >  4:36005‑M2/1‑31 (MQ=255)                                                                                                                 cAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTGGGTGCCTTCCACGGTATAGATACGGATGCTGTCGGTCAGTTTGCTCAGTTGCTCCAGGTCCTGGCGCATTTCGTCGTCAGTGGGGTACTGACCCTTCTGTGGGCTTTCGc                                >  2:279982/1‑149 (MQ=255)                                                                                                                  aGGCCGAACTCCTCGGCCAGGCGCGGGACGtcggcctgcgggtgacgctggggatatggatcagcccggacctggagcgcaacgagcgcgaaattgccacggccatccagctggccaacacgtcgcgcagcgtggtgcgg                                        <  7:116852‑M2/140‑111 (MQ=255)                                                                                                                  aGGCCGAACTCCTCGGCCAGGCGCGGGACGtcggcctgcgggtgacgctggggatatggatcagcccggacctggagcgcaacgagcgcgaaattgccacggccatccagctggccaacacgtcgcgcagcgtggtgcgg                                        >  8:116852‑M2/1‑30 (MQ=255)                                                                                                                      cGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTGGGTGCCTTCCACGGTATAGATACGGATGCTGTCGGTCAGTTTGCTCAGTTGCTCCAGGTCCTGGCGCATTTCGTCGTCAGTGGGGTACTGACCCTTCTGTGGGCTTTCGCCCAgg                           >  7:62616/1‑149 (MQ=255)                                                                                                                           tcctcGGCCAGGCGCGGGACGTCGGCCTGGGTGCCTTCCACGGTATAGATACGGATGCTGTCGGTCAGTTTGCTCAGTTGCTCCAGGTCCTGGCGCATTTCGTCGTCAGTGGGGTACTGACCCTTCTGTGGGCTTTCGCCCAGGCGGaa                      >  2:27188/1‑149 (MQ=255)                                                                                                                                ggCCAGGCGCGGGACGTCGGCCTGGGTGCCTTCCACGGTATAGATACGGATGCTGTCGGTCAGTTTGCTCAGTTGCTCCAGGTCCTGGCGCATTTCGTCGTCAGTGGGGTACTGACCNTTCTGTGGGCTTTCGCCCAGGCGGAACGGc                  <  1:27188/148‑1 (MQ=255)                                                                                                                                ggCCAGGCGCGGGACGTCGGCCTGGGTGCCTTCCACGGTATAGATACGGATGCTGTCGGTCAGTTTGCTCAGTTGCTCCAGGTCCTGGCGCATTTCGTCGTCAGTGGGGTACTGACCCTTCTGTGGGCTTTCGCCCAGGCGGAACGGc                  >  8:48883/1‑148 (MQ=255)                                                                                                                                            gACGTCGGCCTGGGTGCCTTCCACGGTATAGATACGGATGCTGTCGGTCAGTTGGCTCAGTTGCTCCAGGTCCTGGCGCATTTCGTCGTCAGTGGGGTACTGACCCTTCTGTGGGCTTTCGCCCAGGCGGAACGGCGAATACGAAAAGc     >  1:83240/1‑149 (MQ=255)                                                                                                                                               gTCGGCCTGGGTGCCTTCCACGGTATAGATACGGATGCTGTCGGTCAGTTTGCTCAGTTGCTCCAGGTCCTGGCGCATTTCGTCGTCAGTGGGGTACTGACCCTTCTGTGGGCTTTCGCCCAGGCGGAACGGCGAATACGAAAAGCCag  <  8:62616/149‑1 (MQ=255)                                                                                                                                               |                                                                                                                                                     CGACCACCACCCGCACCACGCTGCGCGACGTGTTGGCCAGCTGGATGGCCGTGGCAATTTCGCGCTCGTTGCGCTCCAGGTCCGGGCTGATCCATATCCCCAGCGTCACCCGCAGGCCGAACTCCTCGGCCAGGCGCGGGACGTCGGCCTGGGTGCCTTCCACGGTATAGATACGGATGCTGTCGGTCAGTTTGCTCAGTTGCTCCAGGTCCTGGCGCATTTCGTCGTCAGTGGGGTACTGACCCTTCTGTGGGCTTTCGCCCAGGCGGAACGGCGAATACGAAAAGCCAG  >  NC_002947/1733458‑1733748

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.