New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3168951	38 (0.770)	3 (0.060)	3/242	NT	7.9%	coding (846/2880 nt)	PP_2782	class III pyridoxalphosphate dependent aminotransferase
	?	NC_002947	= 3168978	34 (0.730)					coding (873/2880 nt)	PP_2782	class III pyridoxalphosphate dependent aminotransferase

CCCACAGCAGCCCCATCAGTTGCAGGAATTGCCGGCCCGGCACACGCACCATTGGTTGAGCCTGCAATGGGACGGCGAACACCTGCACGTGCTGCAATTGC‑CGTTCAGTGCAATTACCGCCGTGTTGATGGAACCGATTCAGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTGGGGCTGCGCAAGCTGTGTAACGAGCAACAATGCCCGCTGGTGGTCGATGAAGTGCAGTCGGGTTTTGGTCGCGCCGGGACGTTTCTTGCCAGCAGCCAGTTCAACCTGCAAG  >  NC_002947/3168831‑3169126                                                                                                                                                     |                                                                                                                                                     cccACAGTAGCCCCATCAGTTGCAGGAATTGCCGGCCCGGCACACGCACCATTGGTTGAGCCTGCAATGGGACGGCGAACACCTGCACGTGCTGCAATTGC‑CGTTCAGTGCAATTACCGCCGTGTTGATGGAACCGATTCAGGGCGAAg                                                                                                                                                     <  2:32273‑M2/149‑2 (MQ=255)    acaGCAGCCCCATCAGTTGCAGGAATTGCCGGCCCGGCACACGCACCATTGGTTGAGCCTGCAATGGGACGGCGAACACCTGCACGTGCTGCAATTGC‑CGTTCAGTGCAATTACCGCCGTGTTGATGGAACCGATTCAGGGCGAAggcg                                                                                                                                                  <  2:15974‑M2/149‑5 (MQ=255)         agcCCCATCAGTTGCAGGAATTGCCGGCCCGGCACACGCACCATTGGTTGAGCCTGCAATGGGACGGCGAACACCTGCACGTGCTGCAATTGC‑CGTTCAGTGCAATTACCGCCGTGTTGATGGAACCGATTCAGGGCGAAGGCGGTATc                                                                                                                                             <  6:18945/149‑1 (MQ=255)           ccccATCAGTTGCAGGAATTGCCGGCCCGGCACACGCACCATTGGTTGAGCCTGCAATGGGACGGCGAACACCTGCACGTGCTGCAATTGC‑CGTTCAGTGCAATTACCGCCGTGTTGATGGAACCGATTCAGGGCGAAGGCGGTATCaa                                                                                                                                           >  4:203577/1‑149 (MQ=255)            cccATCAGTTGCAGGAATTGCCGGCCCGGCACACGCACCATTGGTTGAGCCTGCAATGGGACGGCGAACACCTGCACGTGCTGCAATTGC‑CGTTCAGTGCAATTACCGCCGTGTTGATGGAACCGATTCAGGGCGAAggcggt                                                                                                                                                <  7:178957‑M2/143‑7 (MQ=255)            cccATCAGTTGCAGGAATTGCCGGCCCGGCACACGCACCATTGGTTGAGCCTGCAATGGGACGGCGAACACCTGCACGTGCTGCAATTGC‑CGTTCAGTGCAATTACCGCCGTGTTGATGGAACCGATTCAGGGCGAAggcggt                                                                                                                                                >  8:178957‑M2/1‑137 (MQ=255)                               gCCGGCCCGGCACACGCACCATTGGTTGAGCCTGCAATGGGACGGCGAACACCTGCACGTGCTGCAATTGC‑CGTTCAGTGCAATTACCGCCGTGTTGATGGAACCGATTCAGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTc                                                                                                                        <  1:15974/148‑1 (MQ=255)                               gCCGGCCCGGCACACGCACCATTGGTTGAGCCTGCAATGGGACGGCGAACACCTGCACGTGCTGCAATTGC‑CGTTCAGTGCAATTACCGCCGTGTTGATGGAACCGATTCAGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTc                                                                                                                        >  1:204716/1‑148 (MQ=255)                                     ccggcACACGCACCATTGGTTGAGCCTGCAATGGGACGGCGAACACCTGCACGTGCTGCAATTGC‑CGTTCAGTGCAATTACCGCCGTGTTGATGGAACCGATTCAGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTgg                                                                                                                 <  2:204716/149‑1 (MQ=255)                                        gcACACGCACCATTGGTTGAGCCTGCAATGGGACGGCGAACACCTGCACGTGCTGCAATTGC‑CGTTCAGTGCAATTACCGCCGTGTTGATGGAACCGATTCAGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTGGGGc                                                                                                              >  4:93202/1‑149 (MQ=255)                                              gCACCATTGGTTGAGCCTGCAATGGGACGGCGAACACCTGCACGTGCTGCAATTGC‑CGTTCAGTGCAATTACCGCCGTGTTGATGGAACCGATTCAGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTGGGGCTgcgc                                                                                                         >  8:128889/1‑148 (MQ=255)                                                  cATTGGTTGAGCCTGCAATGGGACGGCGAACACCTGCACGTGCTGCAATTGC‑CGTTCAGTGCAATTACCGCCGTGTTGATGGAACCGATTCAGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTGGGGCTGCGCAAGCt                                                                                                    <  3:203577/149‑1 (MQ=255)                                                    ttGGTTGAGCCTGCAATGGGACGGCGAACACCTGCACGTGCTGCAATTGC‑CGTTCAGTGCAATTACCGCCGTGTTGATGGAACCGATTCAGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTGGGGCTGCGCAAGCtgt                                                                                                  <  3:93202/149‑1 (MQ=255)                                                       gTTGAGCCTGCAATGGGACGGCGAACACCTGCACGTGCTGCAATTGC‑CGTTCAGTGCAATTACCACCGTGTTGATGGAACCGATTCAGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGt                                                                                                                          <  7:190289/122‑1 (MQ=255)                                                       gTTGAGCCTGCAATGGGACGGCGAACACCTGCACGTGCTGCAATTGC‑CGTTCAGTGCAATTACCACCGTGTTGATGGAACCGATTCAGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGt                                                                                                                          >  8:190289/1‑122 (MQ=255)                                                                           gCGAACACCTGCACGTGCTGCAATTGCGCGTTCAGTGCAATTACCGCCGTGTTGATGGAACCGATTCAGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTGGGGCTGCGCAAGCTGTGTAACGAGCAACAATGCCCGCt                                                                            >  1:169738/1‑149 (MQ=255)                                                                           gCGAACACCTGCACGTGCTGCAATTGC‑CGTTCAGTGCAATTACCGCCGTGTTGATGGAACCGATTCAGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTGGGGCTGCGCAAGCTGTGTAACGAGCAACAATGCCCGCtg                                                                           <  2:169738/149‑1 (MQ=255)                                                                            cGAACACCTGCACGTGCTGCAATTGC‑CGTTCAGTGCAATTACCGCCGTGTTGATGGAACCGATTCAGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTGGGGCTGCGCAAGCTGTGTAACGAGCAACAATGCCCGCtgg                                                                          >  6:168609/1‑149 (MQ=255)                                                                              aaCACCTGCACGTGCTGCAATTGC‑CGTTCAGTGCAATTACCGCCGTGTTGATGGAACCGATTCAGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTGGGGCTGCGCAAGCTGTGTAACGAGCAACAAt                                                                                   <  7:80270/138‑1 (MQ=255)                                                                              aaCACCTGCACGTGCTGCAATTGC‑CGTTCAGTGCAATTACCGCCGTGTTGATGGAACCGATTCAGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTGGGGCTGCGCAAGCTGTGTAACGAGCAACAAt                                                                                   >  8:80270/1‑138 (MQ=255)                                                                                   cTGCACGTGCTGCAATTGC‑CGTTCAGTGCAATTACCGCCGTGTTGATGGAACCGATTCAGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTGGGGCTGCGCAAGCtgt                                                                                                  >  3:241405/1‑118 (MQ=255)                                                                                   cTGCACGTGCTGCAATTGC‑CGTTCAGTGCAATTACCGCCGTGTTGATGGAACCGATTCAGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTGGGGCTGCGCAAGCtgt                                                                                                  <  4:241405/118‑1 (MQ=255)                                                                                   cTGCACGTGCTGCAATTGC‑CGTTCAGTGCAATTACCGCCGTGTTGATGGAACCGATTCAGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTGGGGCTGCGCAAGCTGTGTAACGAGCAACAATGCCCGCTGGTGGTCGa                                                                   >  6:29497/1‑149 (MQ=255)                                                                                       aCGTGCTGCAATTGC‑CGTTCAGTGCAATTACCGCCGTGTTGATGGAACCGATTCAGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTGGGGCTGCGCAAGCTGTGTACCGAGCCACAATGCCCGCTGGTGGTCGATg                                                                 >  7:74193/1‑147 (MQ=255)                                                                                       aCGTGCTGCAATTGC‑CGTTCAGTGCAATTACCGCCGTGTTGATGGAACCGATTCAGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTGGGGCTGCGCAAGCTGTGTAACGAGCAACAATGCCCGCTGGTGGTCGATGaa                                                               <  7:128889/149‑1 (MQ=255)                                                                                            ctgcAATTGC‑CGTTCAGTGCAATTACCGCCGTGTTGATGGAACCGATTCAGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTGGGGCTGCGCAAGCTGTGTAACGAGCAACAATGCCCGCTGGTGGTCGATGAAGTg                                                            >  3:208598/1‑147 (MQ=255)                                                                                               cAATTGC‑CGTTCAGTGCAATTACCGCCGTGTTGATGGAACCGATTCAGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTGGGGCTGCGCAAGc                                                                                                     >  7:235892/1‑103 (MQ=255)                                                                                               cAATTGC‑CGTTCAGTGCAATTACCGCCGTGGTGATGGAACCGATTCAGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTGGGGCTGCGCAAGc                                                                                                     <  8:235892/103‑1 (MQ=255)                                                                                                              tGCAATTACCGCCGTGTTGATGGAACCGATTCAGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTGGGGCTGCGCAAGCTGTGTAACGAGCAACAATGc                                                                                 <  4:46903/109‑1 (MQ=255)                                                                                                              tGCAATTACCGCCGTGTTGATGGAACCGATTCAGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTGGGGCTGCGCAAGCTGTGTAACGAGCAACAATGc                                                                                 >  3:46903/1‑109 (MQ=255)                                                                                                                cAATTACCGCCGTGTTGATGGAACCGATTCAGGACGAAggcggtaattgcactgaacggcaattgcagcacgtgcaggtgttcgccgtcccattgcaggctcaaccaatggtgcgtgtgccgggccggcaattcctgcaactgatgggg                                       <  5:149809‑M2/149‑112 (MQ=255)                                                                                                                     aCCGCCGTGTTGATGGAACCGATTCAGGGCGAAggcggtaattgcactgaacggcaattgcagcacgtgcaggtgttcgccgtcccattgcaggctcaaccaatggtgcgtgtgccgggccggcaattcc                                                     >  2:203195‑M2/1‑33 (MQ=255)                                                                                                                     aCCGCCGTGTTGATGGAACCGATTCAGGGCGAAggcggtaattgcactgaacggcaattgcagcacgtgcaggtgttcgccgtcccattgcaggctcaaccaatggtgcgtgtgccgggccggcaattcc                                                     <  1:203195‑M2/130‑98 (MQ=255)                                                                                                                          cgTGTTGATGGAACCGATTCAGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTGGGGCTGCGCAAGCTGTGTAACGAGCAACAATGCCCGCTGGTGGGCGATGAAGTGCAGTCGGGTTTTGGTCGCGCCGGGACGTTTc                             <  2:22184/149‑1 (MQ=255)                                                                                                                              ttGATGGAACCGATTCAGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTGGGGCTGCGCAAGCTGTGTAACGAGCAACAATGCCCGCTGGTGGTCGAAGAAGTGCAGTCGGGGATTGGTCGCGCCGGGACGttgcttgc                         >  8:52760/1‑149 (MQ=255)                                                                                                                                gATGGAACCGATTCAGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTGGGGCTGCGCAAGCTGTGTAACGAGCAACAATGCCCGCTGGTGGTCGATGAAGTGCAGTCGGGTTTTGGTCGCGCCGGGACGTTTCTTGc                         >  8:182173/1‑147 (MQ=255)                                                                                                                                 aTGGAACCGATTCAGGGCGAAGACGGTATCAACGAGTTAGCGGCCGAGTTATATCTGGGGCTGCGCAAGCTGTGTAACGAGAAACAATGCCCGCTGGTGGTCGATGAAGTGCAGTCGGGTTTTGGTCGCGCCGGGACGTTTCTTGCcag                      >  7:46523/1‑149 (MQ=255)                                                                                                                                      aCCGATTCAGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTGGGGCTGCGCAAGCTGTGTAACGAGCAACAATGCCCGCTGGTGGTCGATGAAGTGCAGTCGGGTTTTGGTCGCGCCGGGACGTTTCTTGCCAGCAGcc                 <  5:29497/149‑1 (MQ=255)                                                                                                                                              aGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTGGGGCTGCGCAAGCTGTGTAACGAGCAACAATGCCCGCTGGTGGTCGATGaa                                                               <  6:205616/95‑1 (MQ=255)                                                                                                                                              aGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTGGGGCTGCGCAAGCTGTGTAACGAGCAACAATGCCCGCTGGTGGTCGATGaa                                                               >  5:205616/1‑95 (MQ=255)                                                                                                                                              aGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTGGGGCTGCGCAAGCTGTGTAACGAGCAACAATGCCCGCTGGTGGTCGATGAAGTGCAGTCGGGTTTTGGTCGCGCCGGGACGTTTCTTGCCAGCAGCCAGTTCaa          <  4:208598/148‑1 (MQ=255)                                                                                                                                                ggCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTGGGGCTGCGCAAGCTGTGTAACGAGCAACAATGCCCGCTGGTGGTCGATGAAGTGCAGTCGGGtt                                                  <  6:100663/106‑1 (MQ=255)                                                                                                                                                ggCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTGGGGCTGCGCAAGCTGTGTAACGAGCAACAATGCCCGCTGGTGGTCGATGAAGTGCAGTCGGGtt                                                  >  5:100663/1‑106 (MQ=255)                                                                                                                                                     aGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTGGGGCTGCGCAAGCTGTGTAACGAGCAACAATGCCCTCTGGTGGTCGATGAAGTGCAGTCGGGTTTTGGTCGCGTCGGGACGTTTCTTGCCAGCAGCCAGTTCAACCTGCAAg  <  8:46523/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     CCCACAGCAGCCCCATCAGTTGCAGGAATTGCCGGCCCGGCACACGCACCATTGGTTGAGCCTGCAATGGGACGGCGAACACCTGCACGTGCTGCAATTGC‑CGTTCAGTGCAATTACCGCCGTGTTGATGGAACCGATTCAGGGCGAAGGCGGTATCAACGAGTTCGCGGCCGAGTTCTATCTGGGGCTGCGCAAGCTGTGTAACGAGCAACAATGCCCGCTGGTGGTCGATGAAGTGCAGTCGGGTTTTGGTCGCGCCGGGACGTTTCTTGCCAGCAGCCAGTTCAACCTGCAAG  >  NC_002947/3168831‑3169126

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.