New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3552652	32 (0.650)	3 (0.070)	3/238	NT	8.9%	coding (309/978 nt)	PP_3137	group 2 family glycosyl transferase
	?	NC_002947	= 3552675	32 (0.700)					coding (332/978 nt)	PP_3137	group 2 family glycosyl transferase

CCGCCGCACGCGCCCGCAATGAAGGTTTTGCCGCCTTGCAGCGCCTGTTGCCATCGATGCAGCTGGTACAGTTCGTCGATGGCGACTGCGAGGTGAATGCCAGCTGGCTGGCCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCCGCCGTGGCAGTGGTGTGTGGTCGCCGGCGTGAGCGCTTCCCGCAGCGTTCGGTGTACAACTTGCTGTGCGACCTGGAGTGGGATACCCCGGTCGGTGAGGCCAAGGCCTGTGGCGGCGATGCGCTGATGCGGGCAGACGCCTTTGCT  >  NC_002947/3552534‑3552823                                                                                                                                                |                                                                                                                                                     ccgccgCACGCGCCCGCAATGAAGGTTTTGCCGCCTTGCAGCGCCTGTTGCCATCGATGCAGCTGGTACAGTTCGTCGATGGCGACTGCGAGGTGAATGCCAGCTGGCTGGCCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCcgccgtg                                                                                                                                               <  2:112501‑M2/149‑8 (MQ=255) ccgccgCACGCGCCCGCAATGAAGGTTTTGCCGCCTTGCAGCGCCTGTTGCCATCGATGCAGCTGGTACAGTTCGTCGATGGCGACTGCGAGGTGAATGCCAGCTGGCTGGCCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCcgccgtg                                                                                                                                               <  1:80561‑M2/149‑8 (MQ=255)  cgccgcACGCGCCCGCAATGAAGGTTTTGCCGCCTTGCAGCGCCTGTTGCCATCGATGCAGCTGGTACAGTTCGTCGATGGCGACTGCGAGGTGAATGCCAGCTGGCTGGCCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCcgccgtgg                                                                                                                                              <  7:242500‑M2/149‑9 (MQ=255)         cgcgCCCGCAATGAAGGTTTTGCCGCCTTGCAGCGCCTGTTGCCATCGATGCAGCTGGTACAGTTCGTCGATGGCGACTGCGAGGTGAATGCCAGCTGGCTGGCCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCCGCCGTGGCAgtggt                                                                                                                                       <  7:95058/149‑1 (MQ=255)            gcCCGCAATGAAGGTTTTGCCGCCTTGCAGCGCCTGTTGCCATCGATGCAGCTGGTACAGTTCGTCGATGGCGACTGCGAGGTGAATGCCAGCTGGCTGGCCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCCGCCGTGGCAGTGgtgtg                                                                                                                                    >  6:54057/1‑149 (MQ=255)                   aTGAAGGTTTTGCCGCCTTGCAGCGCCTGTTGCCATCGATGCAGCTGGTACAGTTCGTCGATGGCGACTGCGAGGTGAATGCCAGCTGGCTGGCCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCCGCCGTGGCAGTGGTGTGTGGTCGc                                                                                                                             <  8:242500/149‑1 (MQ=255)                   aTGAAGGTTTTGCCGCCTTGCAGCGCCTGTTGCCATCGATGCAGCTGGTACAGTTCGTCGATGGCGACTGCGAGGTGAATGCCAGCTGGCTGGCCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCCGCCGTGGCAGTGGTGTGTGGTCGc                                                                                                                             >  7:37931/1‑149 (MQ=255)                   aTGAAGGTTTTGCCGCCTTGCAGCGCCTGTTGCCATCGATGCAGCTGGTACAGTTCGTCGATGGCGACTGCGAGGTGAATGCCAGCTGGCTGGCCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCCGCCGTGGCAGTGGTGTGTGGTCGc                                                                                                                             <  2:80561/149‑1 (MQ=255)                      aaGGTTTTGCCGCCTTGCAGCGCCTGTTGCCATCGATGCAGCTGGTACAGTTCGTCGATGGCGACTGCGAGGTGAATGCCAGCTGGCTGGCCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCCGCCGTGGCAGTGGTGTGTGGTCGCCgg                                                                                                                          >  7:40945/1‑149 (MQ=255)                                 gccTTGCAGCGCCTGTTGCCATCGATGCAGCTGGTACAGTTCGTCGATGGCGACTGCGAGGTGAATGCCAGCTGGCTGGCCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCCGCCGTGGCAGTGGTGTGTGGTCGCCGGCGTGAGCGCtt                                                                                                               <  3:270762/149‑1 (MQ=255)                                   cTTGCAGCGCCTGTTGCCATCGATGCAGCTGGTACAGTTCGTCGATGGCGACTGCGAGGTGAATGCCAGCTGGCTGGCCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCCGCCGTGGCAGTGGTGTGTGGTCGCCGGCGTGAGCGCTTcc                                                                                                             >  3:178338/1‑149 (MQ=255)                                   cTTGCAGCGCCTGTTGCCATCGATGCAGCTGGTACAGTTCGTCGATGGCGACTGCGAGGTGAATGCCAGCTGGCTGGCCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCCGCCGTGGCAGTGGTGTGTGGTCGCCGGCGTGAGCGCTTcc                                                                                                             <  8:37931/149‑1 (MQ=255)                                             cTGTTGCCATCGATGCAGCTGGTACAGTTCGTCGATGGCGACTGCGAGGTGAATGCCAGCTGGCTGGCCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCCGCCGTGGCAGTGGTGTGTGGTCGCCGGCGTGAGCGCTTCCCGCAGCGTTc                                                                                                   <  5:184621/149‑1 (MQ=255)                                                        gATGCAGCTGGTACAGTTCGTCGATGGCGACTGCGAGGTGAATGCCAGCTGGCTGGCCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCCGCCGTGGCAGTGGTGTGTGGTCGCCGGCGTGAGCGCTTCCCGCAGCGTTCGGTGTACAACt                                                                                        <  6:106801/149‑1 (MQ=255)                                                             aGCTGGTACAGTTCGTCGATGGCGACTGCGAGGTGAATGCCAGCTGGCTGGCCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCCGCCGTGGCAGTGGTGTGTGGTCGCCGGCGTGAGCGCTTCCCGCAGCGTTCGGTGTACAACTTGCtg                                                                                   >  2:20809/1‑149 (MQ=255)                                                                   tACAGTTCGTCGATGGCGACTGCGAGGTGAATGCCAGCTGGCTGGCCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCCGCCGTGGCAGTGGTGTGTGGTCGCCGGCGTGAGCGCTTCCCGCAGCGTTCGGTGTACAACTTGCTGTGCGAc                                                                             <  8:40945/149‑1 (MQ=255)                                                                     cAGTTCGTCGATGGCGACTGCGAGGTGAATGCCAGCTGGCTGGCCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCCGCCGTGGCAGTGGTGTGTGGTCGCCGGCGTGAGCGCTTCCCGCAGCGTTCGGTGTACAACTTGCTGTGCGACCt                                                                           >  4:122373/1‑149 (MQ=255)                                                                       gTTCGTCGATGGCGACTGCGAGGTGAATGCCAGCTGGCTGGCCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCCGCCGTGGCAGTGgtgtg                                                                                                                                    <  3:264936/90‑1 (MQ=255)                                                                       gTTCGTCGATGGCGACTGCGAGGTGAATGCCAGCTGGCTGGCCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCCGCCGTGGCAGTGgtgtg                                                                                                                                    >  4:264936/1‑90 (MQ=255)                                                                       gTTCGTCGATGGCGACTGCGAGGTGAATGCCAGCTGGCTGGCCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCCGCCGTGGCAGTGGTGTGTGGTCGCCGGCGTGAGCGCTTCCCGCAGCGTTCGGTGTACAACTTGCTGTGCGACCTgg                                                                         <  5:54057/149‑1 (MQ=255)                                                                           gtcgATGGCGACTGCGAGGTGAATGCCAGCTGGCTGGCCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCCGCCGTGGCAGTGGTGTGTGGTCGCCGGCGTGAGCGCTTCCCGCAGCGTTCGGTGTACAACTTGCTGTGCGACCTGGAGTg                                                                     <  1:20809/149‑1 (MQ=255)                                                                             cgATGGCGACTGCGAGGTGGATGCCAGCTGGCTGGCCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCCGCCGTGGCAGTGGTGTGTGGTCGCCGGCGTGAGCGCTTCCCGCAGCGTTCGGTGTACAACTTGCTGTGCGACCTGGAGTgg                                                                    >  7:28011/1‑148 (MQ=255)                                                                                    gACTGCGAGGTGAATGCCAGCTGGCTGGCCACGGCGCAGGCTTTTCTTGAGGCAGC‑ACCCCGCCGTGGCAGTGGTGTGTGGTCGCCGGCGTGAGCGCTTCCCGCAGCGTTCGGTGTACAACTTGCTGTGCGACCTGGAGTGGGATAccc                                                             >  1:237367/1‑149 (MQ=255)                                                                                          gAGGTGAATGCCAGCTGGCTGGCCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCCGCCGTGGCAGTGGTGTGTGGTCGCCGGCGTGAGCGCTTCCCGCAGCGTTCGGTGTACAACTTGCTGTGCGACCTGGAGTGGGATACCCcggtc                                                        <  7:233866/147‑1 (MQ=255)                                                                                          gAGGTGAATGCCAGCTGGCTGGCCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCCGCCGTGGCAGTGGTGTGTGGTCGCCGGCGTGAGCGCTTCCCGCAGCGTTCGGTGTACAACTTGCTGTGCGACCTGGAGTGGGATACCCcggtc                                                        >  8:233866/1‑147 (MQ=255)                                                                                           aGGTGAATGCCAGCTGGCTGGCCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCCGCCGTGGCAGTGGTGTGTGGTCGCCGGCGTGAGCGCTTCCCGCAGCGTTCGGTGTACAACTTGCTGTGCGACCTGGAGTGGGATACCCcggtcggt                                                     <  2:237367/149‑1 (MQ=255)                                                                                             gTGAATGCCAGCTGGCTGGCCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCCGCCGTGGCAGTGGTGTGTGGTCGCCGGCGTGAGCGCTTCCCGCAGCGTTCGGTGTACAACTTGCTGTGCGACCTGGAGTGGGATACCCcggtcggt                                                     >  3:278832/1‑147 (MQ=255)                                                                                                           gctggcCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCCGCCGTGGCAGTGGTGTGTGGTCGCCGTCGTGAGCGCTTCCCGCAGCGTTCGGTGTACAACTTGCTGTGCGACCTGGAGTGGGATACCCCGGTCGGTGAGGCCAAGGCCtgtg                                     <  3:110514/149‑1 (MQ=255)                                                                                                           gctggcCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCCGCCGTGGCAGTGGTGTGTGGTCGCCGGCGTGAGCGCTTCCCGCAGCGTTCGGTGTACAACTTGCTGTGCGACCTGGAGTGGGATACCCCGGTCGGTGAGGCCAAGGCCtgtg                                     <  1:112501/149‑1 (MQ=255)                                                                                                             tggcCACGGCGCAGGCTTTTCTTGA‑GCAGCGACCCCGCCGTGGCAGTGGTGTGTGGTCGCCGGCGTGAGCGCTTCCCGCAGCGTTCGGTGTACAACTTGCTGTGCGACCTGGAGTGGGATACCCCGGTCGGTGAGGCCAAGGc                                          >  1:28479/1‑143 (MQ=255)                                                                                                             tggcCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCCGCCGTGGCAGTGGTGTGTGGTCGCCGGCGTGAGCGCTTCCCGCAGCGTTCGGTGTACAACTTGCTGTGCGACCTGGAGTGGGATACCCCGGTCGGTGAGGCCAAGGc                                          <  2:28479/142‑1 (MQ=255)                                                                                                               gcCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCcgccgtggccagccagctggcattcacctcgcagtcgccatcgacgaactgtaccagctgcatcgatggcaacaggcgctgcaaggc                                                               >  6:288927‑M2/1‑32 (MQ=255)                                                                                                               gcCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCcgccgtggccagccagctggcattcacctcgcagtcgccatcgacgaactgtaccagctgcatcgatggcaacaggcgctgcaaggc                                                               <  5:288927‑M2/119‑88 (MQ=255)                                                                                                                ccACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCcgccgtggccagccagctggcattcacctcgcagtcgccatcgacgaactgtaccagctgcatcgatggcaacaggcgctgcaaggcggcaaaaccttcattgcgggcgcgtgcggcg                                <  7:117853‑M2/149‑119 (MQ=255)                                                                                                                    ggCGCAGGCTTTTCTTGA‑GCAGC‑ACCCCGCCGTGGCAGTGGTGTGTGGTCGCCGGCGTGAGCGCTTCCCGCAGCGTTCGGTGTAc                                                                                            <  1:165543/85‑1 (MQ=255)                                                                                                                    ggCGCAGGCTTTTCTTGA‑GCAGC‑ACCCCGCCGTGGCAGTGGTGTGTGGTCGCCGGCGTGAGCGCTTCCCGCAGCGTTCGGTGTAc                                                                                            >  2:165543/1‑85 (MQ=255)                                                                                                                         aGGCTTTTCTTGA‑GCAGC‑ACCCCGCCGTGGCAGTGGTGTGTGGTCGCCGGCGTGAGCGCTTCCCGCAGGGTTCGGTGTACAACTTGCTGTGCGACCTGGAGTGGGATACCCCGGTCGGTGAGGCCAAGGCCTGTGGCGGCGATGCGCt                        >  6:262485/1‑148 (MQ=255)                                                                                                                                         agc‑aCCCCGCCGTGGCAGTGGTGTGTGGTCGCCGGCGTGAGCGCTTCCCGCAGCGTTCGGTGTACAACTTGCTGTGCGACCTGGAGTGGGATACCCCGGTCGGTGAGGCCAAGGCCTGTGGCGGCGATGCGCTGATGCGGGCAGACGcc        <  8:28011/149‑1 (MQ=255)                                                                                                                                                ccgccgTGGCAGTGGTGTGTGGTCGCCGGCGTGAGCGCTTCCCGCAGCGTTCGGTGTACAACTTGCTGTGCGACCTGGAGTGGGATACCCCGGTCGGTGAGGCCAAGGCCTGTGGCGGCGATGCGCTGATGCGGGCAGACGCCTTtgct  <  4:278832/149‑1 (MQ=255)                                                                                                                                                |                                                                                                                                                     CCGCCGCACGCGCCCGCAATGAAGGTTTTGCCGCCTTGCAGCGCCTGTTGCCATCGATGCAGCTGGTACAGTTCGTCGATGGCGACTGCGAGGTGAATGCCAGCTGGCTGGCCACGGCGCAGGCTTTTCTTGA‑GCAGC‑ACCCCGCCGTGGCAGTGGTGTGTGGTCGCCGGCGTGAGCGCTTCCCGCAGCGTTCGGTGTACAACTTGCTGTGCGACCTGGAGTGGGATACCCCGGTCGGTGAGGCCAAGGCCTGTGGCGGCGATGCGCTGATGCGGGCAGACGCCTTTGCT  >  NC_002947/3552534‑3552823

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.