New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4140139 =58 (1.170)5 (0.110) 3/240 NT 8.2% intergenic (+31/‑234) PP_3644/PP_5609 monooxygenase subunit/hypothetical protein
?NC_002947 4140178 = 57 (1.230)intergenic (+70/‑195) PP_3644/PP_5609 monooxygenase subunit/hypothetical protein

ACAACAGCTTGCCCCACGCCGAGAAGAAGAAGTCGCTCGAGCTGTTCATCAAGGAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGCATCAGGCCACCTTTCGTCCCCCGGCAAGAGAAATTTCCTGACACCTCTTGCACAACAAATATTATGG  >  NC_002947/4140032‑4140325
                                                                                                                                                  |                                                                                                                                                   
acaacaGCTTGCCCCACGCCGAGAAGAAGAAGTCGCTCGAGCTGTTCATCAAGGAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTCCGTGAGCGGGCgtt                                                                                                                                                   >  7:61784/1‑149 (MQ=255)
   acaGCTTGCCCCACGCCGAGAAGAAGAAGTCGCTCGAGCTGTTCATCAAGGAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATTATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCtttttt                                                                                                                                                <  1:244745/149‑1 (MQ=255)
       cTTGCCCCACGCCGAGAAGAAGAAGTCGCTCGAGCTGTTCATCAAGGAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCttttttt                                                                                                                                               >  7:241525/1‑146 (MQ=255)
       cTTGCCCCACGCCGAGAAGAAGAAGTCGCTCGAGCTGTTCATCAAGGAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCttttttt                                                                                                                                               <  8:241525/146‑1 (MQ=255)
            cccACGCCGAGAAGAAGAAGTCGCTCGAGCTGTTCATCAAGGAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTGAAACCtg                                                                                                                                      >  6:131759/1‑149 (MQ=255)
             ccACGCCGAGAAGAAGAAGTCGCTCGAGCTGTTCATCAAGGAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCtg                                                                                                                                      >  2:57722/1‑149 (MQ=255)
              cACGCCGAGAAGAAGAAGTCGCTCGAGCTGTTCATCAAGGAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCtgt                                                                                                                                     <  1:57722/149‑1 (MQ=255)
                                    tCGAGCTGTTCATCAAGGAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGc                                                                                                                >  3:266284/1‑148 (MQ=255)
                                      gAGCTGTTCATCAAGGAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCaa                                                                                                              <  5:326958/148‑1 (MQ=255)
                                           gTTCATCAAGGAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCcgc                                                                                                        >  8:194835/1‑149 (MQ=255)
                                            ttCATCAAGGAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCcgc                                                                                                        <  5:196839/148‑1 (MQ=255)
                                               atcaAGGAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCcgcg                                                                                                       >  5:182264/1‑146 (MQ=255)
                                                tcaAGGAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTTAAACCTGTGCAGTCCCTGGTGGAGCGGGCAAGCCCGCGaa                                                                                                     >  2:141578/1‑147 (MQ=255)
                                                 caAGGAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCt                                                                                                                                       >  8:108721/1‑112 (MQ=255)
                                                 caAGGAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCt                                                                                                                                       <  7:108721/112‑1 (MQ=255)
                                                 caAGGAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAagag                                                                                                  >  5:318597/1‑149 (MQ=255)
                                                  aaGGAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAgg                                                                                                 >  7:37449/1‑149 (MQ=255)
                                                    ggAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGc                                                                                                >  7:239966/1‑148 (MQ=255)
                                                     gAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCa                                                                                              <  7:194835/149‑1 (MQ=255)
                                                       aGTGGGGCCGGCGTTCGCCTTAATTCCCATTGCCTGAATCATTGCGGGCCGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGt                                                                                            <  3:30902/149‑1 (MQ=255)
                                                        gtggtgCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTa                                                                                           >  8:172333/1‑149 (MQ=255)
                                                             gCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGa                                                                                       >  1:16135/1‑148 (MQ=255)
                                                             gCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGa                                                                                       >  2:54361/1‑148 (MQ=255)
                                                              ccGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCTGGCTTTTTTTTGAAACCTCTGCAGTCACTGTGGGAGCGCGCAAGCCCGCGAAGAGGCCAGTACAGac                                                                                      >  5:162412/1‑148 (MQ=255)
                                                                  cGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACaga                                                                                <  5:131759/149‑1 (MQ=255)
                                                                       gCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAagag                                                                                                  >  7:150233/1‑127 (MQ=255)
                                                                       gCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAagag                                                                                                  <  8:150233/127‑1 (MQ=255)
                                                                            aaTTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCaa                                                                        <  8:239966/148‑1 (MQ=255)
                                                                            aaTTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGAAAACAGAGAAATCAAg                                                                       >  5:83741/1‑149 (MQ=255)
                                                                             aTTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAg                                                                       <  6:83741/148‑1 (MQ=255)
                                                                              ttCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGc                                                                     <  6:182264/149‑1 (MQ=255)
                                                                                 ccATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCt                                                                                                                                       <  8:124111/80‑1 (MQ=255)
                                                                                 ccATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCt                                                                                                                                       >  7:124111/1‑80 (MQ=255)
                                                                                 ccATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGCATc                                                                  <  2:16135/149‑1 (MQ=255)
                                                                                        cTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGacaac                                                                                   <  8:216479/125‑1 (MQ=255)
                                                                                        cTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGacaac                                                                                   >  7:216479/1‑125 (MQ=255)
                                                                                         tGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGCATCAGGCCAcc                                                          >  2:252599/1‑149 (MQ=255)
                                                                                         tGAATCATTGCGGGACGCGCCCGCTCACGTGGGCCCCTTCGGCCTGCTTGAGCGGGCTGTTTTTTGAAAGCTGTGCACTCGCTCTGGGAGCGGGCAAGCCCGAGAAGAGGCCACTACAGACAACAGAGAAATCAAGGCATCAGGCCAcc                                                          >  5:226179/1‑149 (MQ=255)
                                                                                          gAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTTAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGCATCAGGCCACCt                                                         >  2:283857/1‑149 (MQ=255)
                                                                                           aaTCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGCATCAGGCCAcc                                                          <  1:54361/147‑1 (MQ=255)
                                                                                           aaTCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGCATCAGGCCACCtt                                                        <  8:37449/149‑1 (MQ=255)
                                                                                            aTCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGCATCAGGCCACCttt                                                       >  7:52131/1‑149 (MQ=255)
                                                                                             tCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGCATCAGGCCACCTTTc                                                      <  4:266284/149‑1 (MQ=255)
                                                                                             tCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGCATCAGGCCACCTTTc                                                      <  5:144200/149‑1 (MQ=255)
                                                                                               aTTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGCATCAGGCCACCTTTCGt                                                    >  7:35005/1‑149 (MQ=255)
                                                                                                ttGCGGGACGCGCCCGCTCCCGTGGGCCCCGTCGGCCTGCGTGTGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCAGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGTTCAGACAACAGAGAAATCAAGGCATCCGGCCACCGTTCGTc                                                   >  3:5329/1‑149 (MQ=38)
                                                                                                         gcgcCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGCATCAGGCCACCTTTCGTCCCCCGGc                                            >  4:284292/1‑147 (MQ=255)
                                                                                                         gcgcCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGCATCAGGCCACCTTTCGTCCCCCGGc                                            >  7:285279/1‑147 (MQ=255)
                                                                                                            cccgctcacgcaggccgaaggggcccacgggagcgggcTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGCATCAGGCCACCTTTCGTCCCCCGGCaa                                          >  7:42316‑M2/39‑146 (MQ=255)
                                                                                                             ccgctcacgcaggccgaaggggcccacgggagcgggcTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACaga                                                                                >  8:97970‑M2/38‑107 (MQ=255)
                                                                                                             ccgctcacgcaggccgaaggggcccacgggagcgggcTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACaga                                                                                <  7:97970‑M2/70‑1 (MQ=255)
                                                                                                             ccgctcacgcaggccgaaggggcccacgggagcgggcTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGCATCAGGCCACCTATCGTCCCCCGGCAagag                                       >  4:158541‑M2/38‑148 (MQ=255)
                                                                                                             ccgctcacgcaggccgaaggggcccacgggagcgggcTTTTTTTTGAAACCTGTGCAGTCACTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGCATCAGGCCACCTTTCGTCCCCCGGCAagag                                       >  8:188829‑M2/38‑148 (MQ=255)
                                                                                                             CCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCaa                                                                        >  7:258580‑M1/1‑115 (MQ=255)
                                                                                                             CCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCaa                                                                        <  8:258580‑M1/115‑1 (MQ=255)
                                                                                                             CCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGCATCAGGCCACCTTTCGTCCCCCGGCAagag                                       <  4:211738‑M1/148‑1 (MQ=255)
                                                                                                                   ccGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGCATCAGGCCACCTTTCGTCCCCCGGCAAGAGAAATTTc                                >  6:120908/1‑149 (MQ=255)
                                                                                                                    cGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGCATCAGGCCACCTTTCGTCCCCCGGCAAGAGAAATTTcc                               <  8:35005/149‑1 (MQ=255)
                                                                                                                      tGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGAAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGCATCAGGCCACCTTTCGTCCCCCGGCAAGAGAAATTTCCt                              >  7:204293/1‑148 (MQ=255)
                                                                                                                        tgCCCATTCGGCCTGATAGATCTGTCTTTTTTTTGAAACCTTTTCAGTCACTTTTGTAGAGTGCAATCCCGAGAAGATGCCAGTACAGACAACAGATAAATCAAGTCATCAGGCAACATTTCGTCACCCGTCAAGAGAAATTTACTGa                            <  8:288202/147‑1 (MQ=255)
                                                                                                                          ccccTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGCATCAGGCCACCTTTCGTCCCCCGGCAAGAGAAATTTCCTGacac                         <  4:5329/149‑1 (MQ=255)
                                                                                                                                cGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGCATCAGGCCACCTTTCGTCCCCCGGCAAGAGAAATTTCCTGACACCTCtt                    <  7:172333/148‑1 (MQ=255)
                                                                                                                                   ccTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGCATCAGGCCACCTTTCGTCCCCCGGCAAGAGAAATTTcc                               >  7:259342/1‑134 (MQ=255)
                                                                                                                                   ccTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGCATCAGGCCACCTTTCGTCCCCCGGCAAGAGAAATTTcc                               <  8:259342/134‑1 (MQ=255)
                                                                                                                                   ccTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGCATCAGGCCACCTTTCGTCCCCCGGCAAGAGAAATTTCCt                              >  2:295515/1‑135 (MQ=255)
                                                                                                                                   ccTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGCATCAGGCCACCTTTCGTCCCCCGGCAAGAGAAATTTCCt                              <  1:295515/135‑1 (MQ=255)
                                                                                                                                      gCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGCATCAGGCCACCTTTCGTCCCCCGGCaa                                          <  2:104587/120‑1 (MQ=255)
                                                                                                                                      gCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGCATCAGGCCACCTTTCGTCCCCCGGCaa                                          >  1:104587/1‑120 (MQ=255)
                                                                                                                                               ggcTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGCATCAGGCCACCTTTCGTCCCCCGGCAAGAGAAATTTCCTGACACCTCTTGCACAACAAAtattat    <  8:52131‑M2/146‑1 (MQ=255)
                                                                                                                                                gcTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGCATCAGGCCACCTTTCGTCCCCCGGCAAGAGAAATTTCCTGACACCTCTTGCACAACAAATATTATg   <  6:318597‑M2/147‑1 (MQ=255)
                                                                                                                                                  ttttttttGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGCATCAGGCCACCTTTCGTCCCCCGGCAAGAGAAATTTCCTGACACCTCTTGCACAACAAATATTATgg  >  1:270176/1‑148 (MQ=255)
                                                                                                                                                  |                                                                                                                                                   
ACAACAGCTTGCCCCACGCCGAGAAGAAGAAGTCGCTCGAGCTGTTCATCAAGGAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCCCGTGGGCCCCTTCGGCCTGCGTGAGCGGGCTTTTTTTTGAAACCTGTGCAGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCAGTACAGACAACAGAGAAATCAAGGCATCAGGCCACCTTTCGTCCCCCGGCAAGAGAAATTTCCTGACACCTCTTGCACAACAAATATTATGG  >  NC_002947/4140032‑4140325

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.