New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 456958649 (0.990)3 (0.060) 3/244 NT 5.7% coding (1516/2070 nt) malQ 4‑alpha‑glucanotransferase
?NC_002947 = 4569622 52 (1.110)coding (1552/2070 nt) malQ 4‑alpha‑glucanotransferase

AACCCAGCGAGGGCGCCTACCTCGACTACCCGCTAGACGACCTGTTGCGCCTGCTGGCGCTGGAGTCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGACTGGCCGGACAATGCCCTGGCCACAACCGGCACCCACGACCTGGCGCCACTGGCCGGCTGGCTGGCAAACCGCGA  >  NC_002947/4569476‑4569764
                                                                                                                                                   |                                                                                                                                              
aaCCCAGCGAGGGCGCCTACCTCGACTACCCGCTAGACGACCTGTTGCGCCTGCTGGCGCTGGAGTCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGcg                                                                                                                                              >  3:189665‑M2/1‑147 (MQ=255)
 aCCCAGCGAGGGCGCCTACCTCGACTACCCGCTAGACGACCTGTTGCGCCTGCTGGCGCTGGAGTCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGcgg                                                                                                                                             <  2:128676‑M2/149‑4 (MQ=255)
    cAGCGAGGGCGCCTACCTCGACTACCCGCTAGACGACCTGTTGCGCCTGCTGGCGCTGGAGTCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGcggtgc                                                                                                                                          <  4:231972‑M2/149‑7 (MQ=255)
           ggCGCCTACCTCGACTACCCGCTAGACGACCTGTTGCGCCTGCTGGCGCTGGAGTCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCAGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCa                                                                                                                                    <  1:61482/149‑1 (MQ=255)
               ccTACCTCGACTACCCGCTAGACGACCTGTTGCGCCTGCTGGCGCTGGAGTCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATgcgc                                                                                                                               <  7:38689/149‑1 (MQ=255)
                   ccTCGACTACCCGCTAGACGACCTGTTGCGCCTGCTGGCGCTGGAGTCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGtgc                                                                                                                           >  6:26097/1‑149 (MQ=255)
                           aCCCGCTAGACGACCTGTTGCGCCTGCTGGCGCTGGAGTCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTc                                                                                                                   <  5:26097/149‑1 (MQ=255)
                             ccGCTAGACGACCTGTTGCGCCTGCTGGCGCTGGAGTCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGATAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTc                                                                                                                   >  7:155407/1‑147 (MQ=255)
                                  aGACGACCTGTTGCGCCTGCTGGCGCTGGAGTCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGtgc                                                                                                                           >  6:195051/1‑134 (MQ=255)
                                  aGACGACCTGTTGCGCCTGCTGGCGCTGGAGTCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGtgc                                                                                                                           <  5:195051/134‑1 (MQ=255)
                                       acCTGTTGCGCCTGCTGGCGCTGGAGTCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAg                                                                                                       >  2:71519/1‑149 (MQ=255)
                                           gTTGCGCCTGCTGGCGCTGGAGTCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCgg                                                                                                   >  6:142022/1‑149 (MQ=255)
                                                     ctgGCGCTGGAGTCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCaa                                                                                         <  3:281801/149‑1 (MQ=255)
                                                     ctgGCGCTGGAGTCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGCCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCaa                                                                                         <  5:106876/149‑1 (MQ=255)
                                                     ctgGCGCGGGAGTCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCGGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCaa                                                                                         <  6:246630/149‑1 (MQ=255)
                                                      tgGCGCTGGAGTCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCa                                                                                                                                    <  5:99715/105‑1 (MQ=255)
                                                      tgGCGCTGGAGTCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCa                                                                                                                                    >  6:99715/1‑105 (MQ=255)
                                                       ggCGCTGGAGTCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGc                                                                                       >  8:20033/1‑149 (MQ=255)
                                                        gcgcTGGAGTCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAg                                                                                        <  3:102255/147‑1 (MQ=255)
                                                          gcTGGAGTCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCa                                                                                    >  7:66373/1‑149 (MQ=255)
                                                             ggAGTCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGc                                                                                                               >  1:196055/1‑119 (MQ=255)
                                                             ggAGTCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGc                                                                                                               <  2:196055/119‑1 (MQ=255)
                                                               aGTCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATtctc                                                                               <  1:71519/149‑1 (MQ=255)
                                                                 tCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGa                                                                             <  6:325149/149‑1 (MQ=255)
                                                                 tCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGa                                                                             >  6:159229/1‑149 (MQ=255)
                                                                 tCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGa                                                                             <  3:231972/149‑1 (MQ=255)
                                                                   ggTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGATAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGACt                                                                           >  7:204983/1‑149 (MQ=255)
                                                                   ggTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGACt                                                                           >  2:49601/1‑149 (MQ=255)
                                                                    gTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATgcgc                                                                                                                               >  1:161972/1‑96 (MQ=255)
                                                                    gTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATgcgc                                                                                                                               <  2:161972/96‑1 (MQ=255)
                                                                      gCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGACTGGc                                                                        <  8:204983/149‑1 (MQ=255)
                                                                           aCCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGACTGGCCGGa                                                                    >  6:106856/1‑148 (MQ=255)
                                                                             cAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGACTGGCCGGACaa                                                                 >  4:293434/1‑149 (MQ=255)
                                                                                 cGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGACTGGCCGGACAATGcc                                                             <  5:106856/149‑1 (MQ=255)
                                                                                    tcatcCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGACTGGCCGGACAATGCCCTg                                                          <  8:66373/149‑1 (MQ=255)
                                                                                     catcCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGACTGGCCGGACAATg                                                               >  7:253385/1‑143 (MQ=255)
                                                                                     catcCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGACTGGCCGGACAATg                                                               <  8:253385/143‑1 (MQ=255)
                                                                                           gggTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGACTGGCCGGACAATGCCCTGGCCACaa                                                   >  4:128067/1‑149 (MQ=255)
                                                                                               gAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGACTGGCCGGACAATGCCCTGGCCACAACCgg                                               >  8:121119/1‑149 (MQ=255)
                                                                                                     cTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGcggtgcccaggtcttcacccaggatgatcgcctggtgacgcaccgactccagcgccagcaggcgcaac                                                                            >  5:63184‑M2/1‑46 (MQ=255)
                                                                                                     cTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGcggtgcccaggtcttcacccaggatgatcgcctggtgacgcaccgactccagcgccagcaggcgcaac                                                                            <  6:63184‑M2/114‑69 (MQ=255)
                                                                                                     cTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGACTGGCCGGACAATGCCCTGGCCACAACCGGCACCCa                                         >  1:285527/1‑149 (MQ=255)
                                                                                                        ggCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGcggtgcccaggtcttcacccaggatgatcgcctggtgacgcaccgactccagcgccagcaggcgcaacaggtcgtctagcgggtagtcgaggtaggcgccctcgct                                      <  8:240749‑M2/149‑107 (MQ=255)
                                                                                                         gCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGACTGGCCGGACAATGCCCTGGCCACAACCGGCACCCACGAc                                     <  5:142022/149‑1 (MQ=255)
                                                                                                           aCCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGACTGGCCGGACAATGCCCTGGCCACAACCGGCa                                             <  6:239515/139‑1 (MQ=255)
                                                                                                           aCCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGACTGGCCGGACAATGCCCTGGCCACAACCGGCa                                             >  5:239515/1‑139 (MQ=255)
                                                                                                                  ccGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGACTGGCCGGACAAt                                                                <  2:284149/113‑1 (MQ=255)
                                                                                                                  ccGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGACTGGCCGGACAAt                                                                >  1:284149/1‑113 (MQ=255)
                                                                                                                   cGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGACTGGCCGGACAATGCCCTGGCCACAACCGGCACCCACGACCTGGCGCCAc                           <  3:293434/149‑1 (MQ=255)
                                                                                                                      aCAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGACTGGCCGGACAATGCCCTGGCCACAACCGGCACCCACGACCTGGCGCCACTg                         <  3:71209/149‑1 (MQ=255)
                                                                                                                            tGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGACTGGCCGGACAATGCCCTGGCCACAACCGGCACCCACGACCTGGCGCCACTGGCCggc                   >  8:99560/1‑149 (MQ=255)
                                                                                                                              cgcgAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGGTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGACTGGCCGGACAATGCCCTGGCCACAACCGGCACCCACGACCTGGCGCCACTGGCCggc                   <  6:87612/147‑1 (MQ=255)
                                                                                                                                       cTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGa                                                                             >  7:104520/1‑80 (MQ=255)
                                                                                                                                       cTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGa                                                                             <  8:104520/80‑1 (MQ=255)
                                                                                                                                          gCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGACTGGCCGGACAATGCCCTGGCCACAACCGGCACCCACGACCTGGCGCCACTGGCCGGCTGGCTGGCAAACcg     >  6:295967/1‑149 (MQ=255)
                                                                                                                                           ccGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGACTGGCCGGACAATGCCCTGGCCACAACCGGCACCCACGACCTGGCGCCACTGGCCggctggct              >  1:47208/1‑139 (MQ=255)
                                                                                                                                           ccGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGACTGGCCGGACAATGCCCTGGCCACAACCGGCACCCACGACCTGGCGCCACTGGCCggctggct              <  2:47208/139‑1 (MQ=255)
                                                                                                                                             gagaAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGACTGGCCGGACAATGCCCTGGCCACAACCGGCACCCACGACCTGGCGCCACTGGCCGGCTGGCTGGCAAACCGCGa  <  7:20033/149‑1 (MQ=255)
                                                                                                                                                   gCGGTGCTGGGCATGCGCGTGCTGCCTTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGACTGGCCGGACAATGCCCTGGCCACAACCGGCACCCACGACCTg                                  <  4:73616/111‑1 (MQ=255)
                                                                                                                                                   gCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGACTGGCCGGACAATGCCCTGGCCACAACCGGCACCCACGACCTg                                  >  3:73616/1‑111 (MQ=255)
                                                                                                                                                   |                                                                                                                                              
AACCCAGCGAGGGCGCCTACCTCGACTACCCGCTAGACGACCTGTTGCGCCTGCTGGCGCTGGAGTCGGTGCGTCACCAGGCGATCATCCTGGGTGAAGACCTGGGCACCGTGCCCGACAGCCTGCGCGAAAAGCTGGCCGAGAAAGCGGTGCTGGGCATGCGCGTGCTGCCGTTCGAGCAGACCCAGCCGGGCCAGTTCAAGCCCATTCTCGACTGGCCGGACAATGCCCTGGCCACAACCGGCACCCACGACCTGGCGCCACTGGCCGGCTGGCTGGCAAACCGCGA  >  NC_002947/4569476‑4569764

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.