New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4961891 =	49 (0.990)	3 (0.060)	3/246	NT	6.3%	coding (547/1356 nt)	atoC	two‑component system DNA‑binding transcriptional activator AtoC
	?	NC_002947	4961922 =	42 (0.890)					coding (516/1356 nt)	atoC	two‑component system DNA‑binding transcriptional activator AtoC

CGCCTTCGGCCTGCTCGAACTTGCCAGCCTGAGCCGCGATAGCGCCGGTGAAGGCGCCCTTCTCGTGGCCGAACAGGGTGGCCTCGAGCATGTTGTCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCAGTACGGTCGAGTCACTGCGCGCCACACGGGCCGCCAGCTCCAGCAACTGGCGACTGGCCGGCTCGCAGGCCACCGGCCCTTCTTCGCCG  >  NC_002947/4961774‑4962069                                                                                                                                                     |                                                                                                                                                    cgccTTCGGCCTGCTCGAACTTGCCAGCCTGAGCCGCGATAGCGCCGGTGAAGGCGCCCTTCTCGTGGCCGAACAGGGTGGCCTCGAGCATGTTGTCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGAc                                                                                                                                                     >  1:289638/1‑149 (MQ=255)      tcgccagttgctggagctggcggcccgtgtggcgcgcagtgactcgaccgtactgatttccggcgagtccggtactggcaaggaagtgctggcgcgctacattcaccagcagTCGCCACGAAGGGCTGCGCCGCACGCGGCGActgctg                                                                                                                                                >  8:2986‑M1/113‑149 (MQ=255)      tcgccagttgctggagctggcggcccgtgtggcgcgcagtgactcgaccgtactgatttccggcgagtccggtactggcaaggaagtgctggcgcgctacattcaccagcagTCGCCACGAAGGGCTGCGCCGCACGCGGCGActgctg                                                                                                                                                <  7:2986‑M1/37‑1 (MQ=255)              cTCGAACTTGCCAGCCTGAGCCGCGATAGCGCCGGTGAAGGCGCCCTTCTCGTGGCCGAACAGGGTGGCCTCGAGCATGTTGTCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATg                                                                                                                                         <  5:67227/148‑1 (MQ=255)               tCGAACTTGCCAGCCTGAGCCGCGATAGCGCCGGTGAAGGCGCCCTTCTCGTGGCCGAACAGGGTGGCCTCGAGCATGTTGTCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATg                                                                                                                                         >  6:302517/1‑147 (MQ=255)                ctggagctggcggcccgtgtggcgcgcagtgactcgaccgtactgatttccggcgagtccggtactggcaaggaagtgctggcgcgctacattcaccagcagTCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAg                                                                                                                                      >  4:25429‑M1/103‑149 (MQ=255)                 gAACTTGCCAGCCTGAGCCGCGATAGCGCCGGTGAAGGCGCCCTTCTCGTGGCCGAACAGGGTGGCCTCGAGCATGTTGTCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAgc                                                                                                                                     >  2:44631/1‑149 (MQ=255)                   aCTTGCCAGCCTGAGCCGCGATAGCGCCGGTGAAGGCGCCCTTCTCGTGGCCGAACAGGGTGGCCTCGAGCATGTTGTCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAgcgc                                                                                                                                   <  1:147018/149‑1 (MQ=255)                   aCTTGCCAGCCTGAGCCGCGATAGCGCCGGTGAAGGCGCCCTTCTCGTGGCCGAACAGGGTGGCCTCGAGCATGTTGTCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAgcgc                                                                                                                                   >  4:67452/1‑149 (MQ=255)                       gCCAGCCTGAGCCGCGATAGCGCCGGTGAAGGCGCCCTTCTCGTGGCCGAACAGGGTGGCCTCGAGCATGTTGTCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAgcgcgc                                                                                                                                 >  1:36494/1‑147 (MQ=255)                         cAGCCTGAGCCGCGATAGCGCCGGTGAAGGCGCCCTTCTCGTGGCCGAACAGGGTGGCCTCGAGCATGTTGTCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGt                                                                                                                                        <  5:282802/138‑1 (MQ=255)                         cAGCCTGAGCCGCGATAGCGCCGGTGAAGGCGCCCTTCTCGTGGCCGAACAGGGTGGCCTCGAGCATGTTGTCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAg                                                                                                                              >  5:66683/1‑148 (MQ=255)                         cAGCCTGAGCCGCGATAGCGCCGGTGAAGGCGCCCTTCTCGTGGCCGAACAGGGTGGCCTCGAGCATGTTGTCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGc                                                                                                                             >  2:214043/1‑149 (MQ=255)                         cAGCCTGAGCCGCGATAGAGCCGGTGAAGGCGCCCTTCTCGTGGCCGAACAGGGTGGCCTCGAGCATGTTGTCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGt                                                                                                                                        >  6:282802/1‑138 (MQ=255)                             cTGAGCCGCGATAGCGCCGGTGAAGGCGCCCTTCTCGTGGCCGAACAGGGTGGCCTCGAGCATGTTGTCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACtt                                                                                                                         >  2:39445/1‑149 (MQ=255)                                 gCCGCGATAGCGCCGGTGAAGGCGCCCTTCTCGTGGCCGAACAGGGTGGCCTCGAGCATGTTGTCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCtt                                                                                                                     <  4:232864/149‑1 (MQ=255)                                  ccGCGATAGCGCCGGTGAAGGCGCCCTTCTCGTGGCCGAACAGGGTGGCCTCGAGCATGTTGTCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTg                                                                                                                    <  5:140115/149‑1 (MQ=255)                                   cgcgATAGCGCCGGTGAAGGCGCCCTTCTCGTGGCCGAACAGGGTGGCCTCGAGCATGTTGTCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGc                                                                                                                   <  4:34325/149‑1 (MQ=255)                                    gcgATAGCGCCGGTGAAGGCGCCCTTCTCGTGGCCGAACAGGGTGGCCTCGCGCATGTTGTCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGc                                                                                                                   >  5:216217/1‑148 (MQ=255)                                     cgATAGCGCCGGTGAAGGCGCCCTTCTCGTGGCCGAACAGGGTGGCCTCGAGCATGTTGTCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCa                                                                                                                 <  4:164678/149‑1 (MQ=255)                                                 tGAAGGCGCCCTTCTCGTGGCCGAACAGGGTGGCCTCGAGCATGTTGTCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCg                                                                                                     >  6:15847/1‑149 (MQ=255)                                                     ggCGCCCTTCTCGTGGCCGAACAGGGTGGCCTCGAGCATGTTGTCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCgg                                                                                                 <  1:44631/149‑1 (MQ=255)                                                        gcCCTTCTCGTGGCCGAACAGGGTGGCCTCGAGCATGTTGTCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCAAGTACCGGACTAGCCGGaa                                                                                               >  8:92402/1‑148 (MQ=255)                                                         cccTTCTCGTGGCCGAACAGGGTGGCCTCGAGCATGTTGTCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCCGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAAt                                                                                             <  5:255538/149‑1 (MQ=255)                                                           cTTCTCGTGGCCGAACAGGGTGGCCTCGAGCATGTTGTCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGcc                                                                                                   <  6:181919/141‑1 (MQ=255)                                                           cTTCTCGTGGCCGAACAGGGTGGCCTCGAGCATGTTGTCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGcc                                                                                                   >  5:181919/1‑141 (MQ=255)                                                           cTTCTCGTGGCCGAACAGGGTGGCCTCGAGCATGTTGTCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCa                                                                                           <  7:202414/149‑1 (MQ=255)                                                           cTTCTCGTGGCCGAACAGGGTGGCCTCGAGCATGTTGTCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCa                                                                                           <  1:39445/149‑1 (MQ=255)                                                           cTTCTCGTGGCCGAACAGGGTGGCCTCGAGCATGTTGTCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCa                                                                                           <  5:223102/149‑1 (MQ=255)                                                                  tGGCCGAACAGGGTGGCCTCGAGCATGTTGTCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCAGTACGGt                                                                                    <  2:289638/149‑1 (MQ=255)                                                                         aCAGGGTGGCCTCGAGCATGTTGTCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCAGTACGGTCGAg                                                                                <  5:11404/146‑1 (MQ=255)                                                                         aCAGGGTGGCCTCGAGCATGTTGTCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCAGTACGGTCGAg                                                                                >  6:11404/1‑146 (MQ=255)                                                                                             ttgtCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCAGTACGGTCGAGTCACTGCGCGCCACACGGgccgc                                                         <  5:302517/149‑1 (MQ=255)                                                                                                tCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCAGTACGGTCGAGTCACTGCGCGCCACACGGGCCGCCAg                                                      >  8:18712/1‑149 (MQ=255)                                                                                                      ctacattcaccagcagtcgccgcgtgcggcgcagcccttcgtggcgaCTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCAGTACGGTCGAGTCACTGCGCGCCACACGGGCCGCCAGCTCCAg                                                >  4:25429‑M2/48‑149 (MQ=255)                                                                                                       tCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCAGTACGGTCGAGTCACTGCGCGCCACACGGGCCGCCAGCTCCAGc                                               <  7:18712/149‑1 (MQ=255)                                                                                                        cgccgcGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCAGTACGGTCGAGTCACTGCGCGCCACACGGGCCGCCAGCTCCAGc                                               >  7:292400/1‑148 (MQ=255)                                                                                                              gcAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCAGTACGGTCGAGTCACTGCGCGCCACACGGGCCGCCAGCTCCAGCAACTGGc                                        <  2:36494/149‑1 (MQ=255)                                                                                                                cagcagtcgccgcgtgcggcgcagcccttcgtggcgaCTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCAGTACGGTCGAGTCACTGCGCGCCACACGGGCCGCCAGCTCCAGCAACTGGCGa                                      >  8:2986‑M2/38‑149 (MQ=255)                                                                                                                cagcagtcgccgcgtgcggcgcagcccttcgtggcgaCTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCAGTACGGTCGAGTCACTGCGCGCCACACGGGCCGCCAGCTCCAGCAACTGGCGa                                      <  7:2986‑M2/112‑1 (MQ=255)                                                                                                                aGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCAGTACGGTCGAGTCACTGCGCGCCACACGGGCCGCCAGCTCCAGCAACTGGCGa                                      >  3:295996/1‑149 (MQ=255)                                                                                                                aGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCAGTACGGTCGAGTCACTGCGCGCCACACGGGCCGCCAGCTCCAGCAACTGGCGa                                      >  3:154886/1‑149 (MQ=255)                                                                                                                aGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCAGTACGGTCGAGTCACTGCGCGCCACACGGGCCGCCAGCTCCAGCAACTGGCGa                                      <  6:66683/149‑1 (MQ=255)                                                                                                                  ttGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCAGTACGGTCGAGTCACTGCGCGCCACACGGGCCGCCAGCTCCAg                                                <  5:3615/137‑1 (MQ=255)                                                                                                                  ttGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCAGTACGGTCGAGTCACTGCGCGCCACACGGGCCGCCAGCTCCAg                                                >  6:3615/1‑137 (MQ=255)                                                                                                                      TCGCCACGAAGGGCTGCGGCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGAGTCGCCGGAAATCAGTACGGTCGAGTCACTGCGCGCCACACGGGCCGCCAGCTCCAGCAACTGGCGACTGGcc                                >  7:92402‑M1/1‑149 (MQ=255)                                                                                                                      TCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCAGTACGGTCGAGTCACTGCGCGCCACACGGGCCGCCAGCTCCAGCAACTGGCGACTGGcc                                <  6:99518‑M1/149‑1 (MQ=255)                                                                                                                         CCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGaa                                                                                               <  3:161254‑M1/83‑1 (MQ=255)                                                                                                                         CCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGaa                                                                                               >  4:161254‑M1/1‑83 (MQ=255)                                                                                                                         CCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCAGTACGGTCGAGTCACTGCGCGCCACACGGGCCGCCAGCTCCAGCAACTGGCGACTGGCCGGc                             <  4:59073‑M1/149‑1 (MQ=255)                                                                                                                         CCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCAGTACGGTCGAGTCACTGCGCGCCACACGGGCCGCCAGCTCCAGCAACTGGCGACTGGCCGGc                             <  4:235659‑M1/149‑1 (MQ=255)                                                                                                                          CACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCAGTACGGTCGAGTCACTGCGCGCCACACGGGCCGCCAGCTCCAGCAACTGGCGACTGGCCGGCt                            <  3:29755‑M1/149‑1 (MQ=255)                                                                                                                          CACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCAGTACGGTCGAGTCACTGCGCGCCACACGGGCCGCCAGCTCCAGCAACTGGCGACTGGCCGGCt                            <  4:69734‑M1/149‑1 (MQ=255)                                                                                                                          CACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCAGTACGGTCGAGTCACTGCGCGCCACACGGGCCGCCAGCTCCAGCAACTGGCGACTGGCCGGCt                            >  3:67452‑M1/1‑149 (MQ=255)                                                                                                                          CACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGCACCGGACTCGCCGGAAATCAGTACGGTCGAGTCACTGCGCGCCACACGGGCCGCCAGCTCCAGCAACTGGCGACTGGCCGGCt                            >  1:214043‑M1/1‑149 (MQ=255)                                                                                                                           aCGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCAGTACGGTCGAGTCACTGCGCGCCACACGGGCCGCCAGCTCCAGCAACTGGCGACTGGCCGGCTc                           >  2:62786/1‑149 (MQ=255)                                                                                                                            cGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCAGTACGGTCGAGTCACTGCGCGCCACACGGGCCGCCAGCTCCAGCAACTGGCGACTGGCCGGCTCg                          <  5:15847/149‑1 (MQ=255)                                                                                                                                  gCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCAGTACGGTCGAGTCACTGCGCGCCACACGGGCCGCCAGCTCCAGCAACt                                           <  6:265227/126‑1 (MQ=255)                                                                                                                                  gCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCAGTACGGTCGAGTCACTGCGCGCCACACGGGCCGCCAGCTCCAGCAACt                                           >  5:265227/1‑126 (MQ=255)                                                                                                                                                  cgaCTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCAGTACGGTCGAGTCACTGCGCGCCACACGGGCCGCCAGCTCCAGCAACTGGCGACTGGCCGGCTCGCAGGCCACCGGCCCTTCTTCGc    <  4:295996‑M2/146‑1 (MQ=255)                                                                                                                                                   gaCTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCAGTACGGTCGAGTCACTGCGCGCCACACGGGCCGCCAGCTCCAGCAACTGGCGACTGGCCGGCTCGCAGGCCACCGGCCCTTCTTCGcc   >  4:297037‑M2/3‑149 (MQ=255)                                                                                                                                                    aCTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCAGTACGGGCGAGTCACTGCGCGCCACACGGGCCGCCAGCTCCAGCAACTGGCGACTGGCCGGCTCGCAGGCCACCGGCCCTTCTTCGCCg  <  4:29755‑M2/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    CGCCTTCGGCCTGCTCGAACTTGCCAGCCTGAGCCGCGATAGCGCCGGTGAAGGCGCCCTTCTCGTGGCCGAACAGGGTGGCCTCGAGCATGTTGTCGGGGATCGCCGCGCAGTTGATCGCCACGAAGGGCTGCGCCGCACGCGGCGACTGCTGGTGAATGTAGCGCGCCAGCACTTCCTTGCCAGTACCGGACTCGCCGGAAATCAGTACGGTCGAGTCACTGCGCGCCACACGGGCCGCCAGCTCCAGCAACTGGCGACTGGCCGGCTCGCAGGCCACCGGCCCTTCTTCGCCG  >  NC_002947/4961774‑4962069

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.