New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 38445 =62 (1.230)5 (0.100) 3/246 NT 8.7% coding (185/984 nt) PP_0034 bactoprenol glycosyl‑transferase
?NC_002947 38482 = 46 (0.960)coding (148/984 nt) PP_0034 bactoprenol glycosyl‑transferase

CTCTATGTCGACGACGGCAGTAATGACCGGACGGCCGACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/38485‑38445
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacatAGAGGATTTCGCAGGAGACGGGTAAGCGCTTCACCACGCGGGTGATTCGCTGGTGGAACTCGGGGATGGTTTCCTCTTCCTGGAAGCAAGGGACCACGATGGTTAACAAGGGATCAGGGCGCTCGGGAAAGCGAT  >  NC_002947/38482‑38616
                                                                                                                                                                                
CTCTATGTCGACGACGGCAGTAATGACCGGACGGCCGACATAGAGGATTTCGCAGGAGACGGGTAAGCGCTTCACCACGCGGGTGATTCGCTGGTGGAACTCGGGGATGGTTTCCTCTTCCTGGAAGCAAGGGACCACGATGGTTAAC                              >  4:41068/1‑148
CTCTATGTCGACGACGGCAGTAATGACCGGACGGCCGACATAGAGGATTTCGCAGGAGACGGGTAAGCGCTTCACCACGCGGGTGATTCGCTGGTGGAACTCGGGGATGGTTTCCTCTTCCTGGAAGCAAGGGACCACGATGGTTAAC                              >  7:228833/1‑148
CTCTATGTCGACGACGGCAGTAATGACCGGACGGCCGACATAGAGGATTTCGCAGGAGACGGGTAAGCGCTTCACCACGCGGGTGATTCGCTGGTGGAACTCGGGGATGGTTTCCTCTTCCT                                                        <  7:102846/122‑1
CTCTATGTCGACGACGGCAGTAATGACCGGACGGCCGACATAGAGGATTTCGCAGGAGACGGGTAAGCGCTTCACCACGCGGGTGATTCGCTGGTGGAACTCGGGGATGGTTTCCTCTTCCT                                                        >  8:102846/1‑122
 TCTATGTCGACGACGGCAGTAATGACCGGACGGCCGACATAGAGGATTTCGCAGGAGACGGGTAAGCGCTTCACCACGCGGGCGATTCGCTGGTGGAACTCGGGGATGGTTTCCTCTTCCTGGAAGCAAGGGACCACGATGGTTAAC                              >  8:235199/1‑147
                                   CGACATAGAGGATTTCGCAGGAGACGGGTAAGCGCTTCACCACGCGGGTGATTCGCTGGTGGAACTCGGGGATGGTTTCTTCTTCCTGGAAGCAAGGGACCACGATGGTT                                 <  1:219941/110‑1
                                   CGACATAGAGGATTTCGCAGGAGACGGGTAAGCGCTTCACCACGCGGGTGATTCGCTGGTGGAACTCGGGGATGGTTTCATCTTCCTGGAAGCAAGGGACCACGATGGTT                                 >  2:219941/1‑110
                                        TAGAGGATTTCGCAGGAGACGGGTAAGCGCTTCACCACGCGGGTGATTCGCTGGTGGAACTCGGGGATGGTTTCCTCTTCCTGGAAGCAAGGGACCACGATGGTTAACAAGGGATCAGGGCGCTCGGGAAAGCGAT  >  5:213825/1‑136
                                        TAGAGGATTTCGCAGGAGACGGGTAAGCGCTTCACCACGCGGGTGATTCGCTGGTGGAACTCGGGGATGGTTTCCTCTTCCTGGAAGCAAGGGACCACGATGGTTAACAAGGGATCAGGGCGCTCGGGAAAGCGAT  <  6:213825/136‑1
                                                                                                                                                                                
CTCTATGTCGACGACGGCAGTAATGACCGGACGGCCGACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/38485‑38445
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgacatAGAGGATTTCGCAGGAGACGGGTAAGCGCTTCACCACGCGGGTGATTCGCTGGTGGAACTCGGGGATGGTTTCCTCTTCCTGGAAGCAAGGGACCACGATGGTTAACAAGGGATCAGGGCGCTCGGGAAAGCGAT  >  NC_002947/38482‑38616

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.