New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	210724 =	68 (1.350)	3 (0.060)	3/244	NT	5.9%	coding (16230/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	215337 =	31 (0.650)					coding (20843/26049 nt)	PP_0168	putative surface adhesion protein

CCGCCCAGTTGCAGGTTCTCGAAGGTCGCACCAGTGGCGTCTACCGCCGAGTTGATGCCCAGGCTGATCTGGCCAGCATCGTTGTAAACGTCATCGCCCTGCGCAGCGTGGGTGTACGGCGCGCTGGTCTCGCCGGCCTTGATGGTGACCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/210876‑210724 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacctggTCGTGACCCTGAGCAACAACGCCCAGGTCA  >  NC_002947/215337‑215366                                                                                                                                                                                         CCGCCCAGTTGCAGGTTCTCGAAGGTCGCACCAGTGGCGTCTACCGCCGAGTTGATGCCCAGGCTGATCTGGCCAGCATCGTTGTAAACGTCATCGCCCTGCGCAGCGTGGGTGTACGGCGCGCTGGTCTCGCCGGCCTTGATGGTGAC                                    >  3:185282/1‑149     CCAGTTGCAGGTTCTCGAAGGTCGCACCAGTGGCGTCTACCGCCGAGTTGATGCCCAGGCTGATCTGGCCAGCATCGTTGTAAACGTCATCGCCCTGCGCAGCGTGGGTGTACGGCGCGCTGGTCTCGCCGGCCTTGATGGTGACCTGG                                <  3:286491/149‑1                                   TGGCGTCTACCGCCGAATTGATGCCCAGGCTGATCTGGCCAGCATCGTTGTAGACGTCATCGCCTTGCGCGTCGTGGGTGTACGGCGCGCTGGTTTCGCCGGCCTTGATGGTGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCA  <  5:71967/149‑1                                               CCGAATTGATGCCCAGGCTGATCTGGCCAGCATCGTTGTAGACGTCATCGCCTTGCGCGTCGTGGGTGTACGGCGCGCTGGTTTCGCCGGCCTTGATGGTGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGT    >  5:118049/1‑135                                               CCGAATTGATGCCCAGGCTGATCTGGCCAGCATCGTTGTAGACGTCATCGCCTTGCGCGTCGTGGGTGTACGGCGCGCTGGTTTCGCCGGCCTTGATGGTGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGT    <  6:118049/135‑1                                                                                                                                                                                         CCGCCCAGTTGCAGGTTCTCGAAGGTCGCACCAGTGGCGTCTACCGCCGAGTTGATGCCCAGGCTGATCTGGCCAGCATCGTTGTAAACGTCATCGCCCTGCGCAGCGTGGGTGTACGGCGCGCTGGTCTCGCCGGCCTTGATGGTGACCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/210876‑210724 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacctggTCGTGACCCTGAGCAACAACGCCCAGGTCA  >  NC_002947/215337‑215366

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.