New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 224656	55 (1.090)	3 (0.060)	3/250	NT	5.0%	coding (607/864 nt)	PP_0172	ABC transporter permease
	?	NC_002947	= 224689	60 (1.230)					coding (640/864 nt)	PP_0172	ABC transporter permease

GTGCATTCGGTGCTATGGGCGTTGGCGCTGAATACCTATGCCGGCTTCCTCGGTGTGTCGGAGACGCTGCGCATGGCGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/224518‑224656 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccAGCCGATCTTCAACCCCGACAGGATCGACGGCAGGGCTGCG  <  NC_002947/224689‑224649                                                                                                                                                                                      GTGCATTCGGTGCTATGGGCGTTGGCGCTGAATACCTATGACGGCTTCCTCGGTGTGTCGGAGACGCTGCGCATGGCGGGCCGCAACTATGGTCTGAAGGGCCTGAGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCAGCCttcgat                                 >  2:37991/1‑143                                ATACCTATGCCGGCTTCCTCGGTGTGTCGGAGACGCTGCGCATGGCGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCAGCCGATCTTCAACCCCGACAGGATCGACGGCAGGGCTGCG  <  5:273420/149‑1                                                  TCGGTGTGTCGGAGACGCTGCGCATGGCGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCAGCCGATCTTCAACCCCGACAGGATCGACGGCAGGG       <  3:50394/126‑1                                                  TCGGTGTGTCGGAGACGCTGCGCATGGCGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCAGCCGATCTTCAACCCCGACAGGATCGACGGCAGGG       >  4:50394/1‑126                                                                                                                                                                                      GTGCATTCGGTGCTATGGGCGTTGGCGCTGAATACCTATGCCGGCTTCCTCGGTGTGTCGGAGACGCTGCGCATGGCGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/224518‑224656 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccAGCCGATCTTCAACCCCGACAGGATCGACGGCAGGGCTGCG  <  NC_002947/224689‑224649

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.