New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 224656	55 (1.090)	3 (0.060)	3/250	NT	5.0%	coding (607/864 nt)	PP_0172	ABC transporter permease
	?	NC_002947	= 224689	60 (1.230)					coding (640/864 nt)	PP_0172	ABC transporter permease

GTGCATTCGGTGCTATGGGCGTTGGCGCTGAATACCTATGCCGGCTTCCTCGGTGTGTCGGAGACGCTGCGCATGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAGTGTTTGGTGCCAGCAGTGGCAAAGGCGGGTTGGGTTGGTACATCTTCCAGAACCGCAACGAACTGTATA  >  NC_002947/224518‑224797                                                                                                                                             |                                                                                                                                               gTGCATTCGGTGCTATGGGCGTTGGCGCTGAATACCTATGCCGGCTTCCTCGGTGTGTCGGAGACGCTGCGCATGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGAt                                                                                                                                      <  2:3777/149‑1 (MQ=255) gTGCATTCGGTGCTATGGGCGTTGGCGCTGAATACCTATGACGGCTTCCTCGGTGTGTCGGAGACGCTGCGCATGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGAGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCagccttcgat                                                                                                                                      >  2:37991‑M1/1‑139 (MQ=255)  tGCATTCGGTGCTATGGGCGTTGGCGCTGAATACCTATGCCGGCTTCCTCGGTGTGTCGGAGACGCTGCGCATGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATc                                                                                                                                     <  1:127351/149‑1 (MQ=255)    cATTCGGTGCTATGGGCGTTGGCGCTGAATACCTATGCCGGCTTCCTCGGTGTGTCGGAGACGCTGCGCAGGG‑‑CGGGCCGCAACTATGGGCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCt                                                                                                                                   <  5:155178/149‑1 (MQ=255)    cATTCGGTGCGATGGGCGTTGGCGCTGAATACCTATGCCGGCTTCCTCGGTGTGTCGGAGACGCTGCGCATGG‑‑CGGGCCGCAACTATGGTCTGACGGGCCTGCGGCGGGTATTGCACAGCCTCGTGCCCGCAGCCCTGCCGTCGATCCt                                                                                                                                   <  5:150422/149‑1 (MQ=255)          gTGCTATGGGCGTTGGCGCTGAATACCTATGCCGGCTTCCTCGGTGTGTCGGAGACGCTGCGCATGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCggg                                                                                                                             >  3:263162/1‑149 (MQ=255)           tGCTATGGGCGTTGGCGCTGAATACCTATGCCGGCTTCCTCGGTGTGTCGGAGACGCTGCGCATGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCgggg                                                                                                                            <  7:69976/149‑1 (MQ=255)                  ggCGTTGGCGCTGAATACCTATGCCGGCTTCCTCGGTGTGTCGGAGACGCTGCGCATGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAg                                                                                                                      <  8:261500/148‑1 (MQ=255)                       tGGCGCTGAATACCTATGCCGGCTTCCTCGGTGTGTCGGAGACGCTGCGCATGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGcc                                                                                                                                            >  5:14078/1‑121 (MQ=255)                       tGGCGCTGAATACCTATGCCGGCTTCCTCGGTGTGTCGGAGACGCTGCGCATGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGcc                                                                                                                                            <  6:14078/121‑1 (MQ=255)                                aTACCTATGCCGGCTTCCTCGGTGTGTCGGAGACGCTGCGCATGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCagccgatcttcaaccccgacaggatcgacggcagggctgcg                                                                                                       <  5:273420‑M1/149‑42 (MQ=255)                                         ccGGCTTCCTCGGTGTGTCGGAGACGCTGCGCATGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCg                                                                                              >  4:164462/1‑148 (MQ=255)                                            gCTTCCTCGGTGTGTCGGAGACGCTGCGCATGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTAcc                                                                                          <  6:285990/149‑1 (MQ=255)                                                ccTCGGTGTGTCGGAGACGCTGCGCATGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCt                                                                                        <  3:164462/147‑1 (MQ=255)                                                  tCGGTGTGTCGGAGACGCTGCGCATGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCagccgatcttcaaccccgacaggatcgacggcaggg                                                                                                            <  3:50394‑M1/126‑37 (MQ=255)                                                  tCGGTGTGTCGGAGACGCTGCGCATGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCagccgatcttcaaccccgacaggatcgacggcaggg                                                                                                            >  4:50394‑M1/1‑90 (MQ=255)                                                     gtgtgtCGGAGACGCTGCGCATGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCtt                                                                                       >  3:183647/1‑143 (MQ=255)                                                     gtgtgtCGGAGACGCTGCGCATGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCtt                                                                                       <  4:183647/143‑1 (MQ=255)                                                     gtgtgtCGGAGACGCTGCGCATGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCATGGCGTACACTTATAGcc                                                                                 >  4:197898/1‑149 (MQ=255)                                                      tgtgtCGGAGACGCTGCGCATGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCcg                                                                                >  5:309182/1‑149 (MQ=255)                                                        tgtCGGAGACGCTGCGCATGG‑‑CGGGCCGCAACTATGGTCTGAAGGGACTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCcgc                                                                               <  5:200132/148‑1 (MQ=255)                                                         gtCGGAGTGGCTGCTGATGG‑‑TGGGCCGGAAGTATGGTGTGAAGGTGCTGCGGCTGGTTTTTGTCATGCTCGTGGCCGCAGCCCTGGGGTCTATGCTGTCTTGGTTGTTGATC‑GGGTGGGCGTTTGCCTGGCGTTGCGTTATAGAAGCgg                                                                             <  4:263162/149‑1 (MQ=255)                                                                aCGCTGCGCATGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAgt                                                                      >  1:259516/1‑149 (MQ=255)                                                                  gCTGCGCATGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGt                                                                                                                           >  5:216631/1‑95 (MQ=255)                                                                  gCTGCGCATGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGt                                                                                                                           <  6:216631/95‑1 (MQ=255)                                                                  gCTGCGCATGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAgtgt                                                                    >  3:114895/1‑149 (MQ=255)                                                                  gCTGCGCATGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAgtgt                                                                    >  5:148122/1‑149 (MQ=255)                                                                  gCTGCGCATGACTCGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAgt                                                                      <  1:111110/149‑1 (MQ=255)                                                                    tGCGCATGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAGTGttt                                                                  >  2:193225/1‑149 (MQ=255)                                                                      cgcATGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAGTGTTTg                                                                 <  6:309182/148‑1 (MQ=255)                                                                      cgcATGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAGTGTTTg                                                                 <  1:193225/148‑1 (MQ=255)                                                                      cgcATGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAGTGTTTg                                                                 <  2:259516/148‑1 (MQ=255)                                                                       gcATGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAGTGTTTGGt                                                               >  1:197921/1‑149 (MQ=255)                                                                         aTGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGTCTGGCGTACCCTTATAGCCGCGGAATTAGTGTTTGGTGc                                                             >  2:237475/1‑149 (MQ=255)                                                                         aTGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAGTGTTTGGTGc                                                             >  6:298188/1‑149 (MQ=255)                                                                          tGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAGTGTTTGGTGcc                                                            <  5:311689/149‑1 (MQ=255)                                                                                    cGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAGTGTTTGGTGCCAGCAGTgg                                                    <  7:273109/149‑1 (MQ=255)                                                                                              gTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAGTGTTTGGTGCCAGCAGTGGCAAAGGCgg                                           <  1:37991/148‑1 (MQ=255)                                                                                              gTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAGTGTTTGGTGCCAGCAGTGGCAAAGGCgg                                           <  7:150091/148‑1 (MQ=255)                                                                                              gTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTCTCGGGGTCGAAGATC‑GGCTGGCCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAGTGTTTGGTGCCAGCAGTGGCAAAGGCggg                                          >  8:291973/1‑149 (MQ=255)                                                                                               tCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAGTGTTTGGTGCCAGCAGt                                                      <  4:43571/136‑1 (MQ=255)                                                                                               tCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAGTGTTTGGTGCCAGCAGt                                                      >  3:43571/1‑136 (MQ=255)                                                                                                cTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAGAGTTTGGTGCCAGCAGTGGCAAAGGCgggtt                                        <  1:26171/149‑1 (MQ=255)                                                                                                 tGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACACTTATAGCAGCGGAATTAGTGTTTGGTGCCAGCAGTGGCAAAGGCgggttg                                       >  6:16697/1‑149 (MQ=255)                                                                                                      ggCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAGTGTTTGGTGCCAGCAGTGGCAAAGGCGggttgggttg                                  <  2:180621/149‑1 (MQ=255)                                                                                                          tGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAGTGTTTGGTGCCAGCAGTGGCAAAGGCGGGTTGGGTTGGTa                               >  8:254398/1‑148 (MQ=255)                                                                                                            cGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATCGGGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAGTGTTTGGTGCCAGCAGTGGCAAAGGCGGGTTGGGTTGGTACa                             >  1:257602/1‑149 (MQ=255)                                                                                                               cTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAAtt                                                                         <  4:301991/101‑1 (MQ=255)                                                                                                               cTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAAtt                                                                         >  3:301991/1‑101 (MQ=255)                                                                                                               cTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAGTGTTTGGTGCCAGCAGTGGCAAAGGCGGGTTGGGTTGGTa                               >  5:53639/1‑143 (MQ=255)                                                                                                               cTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAGTGTTTGGTGCCAGCAGTGGCAAAGGCGGGTTGGGTTGGTa                               <  6:53639/143‑1 (MQ=255)                                                                                                                     ttGGACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATATCCGCGGAATTAGTGTTTGGTGCCAGCAGTGGCAAAGGCGGGTTGGGTTGGTACATCTTGCAGaa                   <  5:312921/149‑1 (MQ=255)                                                                                                                     ttGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAGTGTTTGGTGCCAGCAGTGGCAAAGGCGGGTTGGGTTGGTACATCTTCCAGaa                   >  3:274309/1‑149 (MQ=255)                                                                                                                     ttGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAGTGTTTGGTGCCAGCAGTGGCAAAGGCGGGTTGGGTTGGTACATCTTCCAGa                    <  6:148122/148‑1 (MQ=255)                                                                                                                       gCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAGTGTTTGGTGCCAGCAGTGGCAAAGGCGGGTTGGGTTGGTACATCTTCCAGAAc                  <  4:274309/148‑1 (MQ=255)                                                                                                                       gCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCAGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAGTGTTTGGTGCCAGCAGTGGCAAAGGCGGGTTGGGTTGGTACATCTTCCAGAAcc                 >  4:121526/1‑149 (MQ=255)                                                                                                                             ccTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAGTGTTTGGTGCCAGCAGTGGCAAAGGCGGGTTGGGTTGGTACATCTTCCAGAACCGCAAc            >  4:136343/1‑148 (MQ=255)                                                                                                                                    cccGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAGTGTTTGGTGCCAGCAGTGGCAAAGGCGGGTTGGGTTGGTACATCTTCCAGAACCGCAACGAACTGt     <  4:114895/148‑1 (MQ=255)                                                                                                                                    cccGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAGTGTTTGGTGCCAGCAGTGGCAAAGGCGGGTTGGGTTGGTACATCTTCCAGAACCGCAACGAACTGt     <  5:298188/148‑1 (MQ=255)                                                                                                                                      cGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTgggctgcgggcacgaggatgtgcaataccagccgcaggcccttcagaccatagttgcggcccgccatgcgcagcgtctccgacacaccgaggaagccggcataggtat  <  5:273420‑M2/149‑109 (MQ=255)                                                                                                                                       gCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTa                                                                        <  7:292207/78‑1 (MQ=255)                                                                                                                                       gCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTa                                                                        >  8:292207/1‑78 (MQ=255)                                                                                                                                           cccTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTgggctgcgggcacgaggatgtgcaataccagccgcaggcccttcagaccatagttgcggcccgccatgcgcagcgtctccgacacaccga                    <  3:50394‑M2/126‑91 (MQ=255)                                                                                                                                           cccTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTgggctgcgggcacgaggatgtgcaataccagccgcaggcccttcagaccatagttgcggcccgccatgcgcagcgtctccgacacaccga                    >  4:50394‑M2/1‑36 (MQ=255)                                                                                                                                             |                                                                                                                                               GTGCATTCGGTGCTATGGGCGTTGGCGCTGAATACCTATGCCGGCTTCCTCGGTGTGTCGGAGACGCTGCGCATGG‑‑CGGGCCGCAACTATGGTCTGAAGGGCCTGCGGCTGGTATTGCACATCCTCGTGCCCGCAGCCCTGCCGTCGATCCTGTCGGGGTTGAAGATC‑GGCTGGGCGTTTGCCTGGCGTACCCTTATAGCCGCGGAATTAGTGTTTGGTGCCAGCAGTGGCAAAGGCGGGTTGGGTTGGTACATCTTCCAGAACCGCAACGAACTGTATA  >  NC_002947/224518‑224797

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.