New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 291024	65 (1.290)	3 (0.060)	3/248	NT	5.3%	coding (85/594 nt)	ssuE	NAD(P)H‑dependent FMN reductase subunit
	?	NC_002947	= 291076	44 (0.910)					coding (137/594 nt)	ssuE	NAD(P)H‑dependent FMN reductase subunit

CTCCAACAGAACACAAGGAAGCGCAGCAATGCTGGTCGTCTCAATCGGTGGTAGCCCAAGTCTCCGTTCACGCTCCGGCGTGCTGCTCGAGCGTTCGCGCCAGTGGCTGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/290912‑291024 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggTCTTCGGCGGGAAAGTCACGCACCTGGAACGTCACCACTTCAACGCCGCGATCCTGCAGCCACTGGCGCGAACGCTCGAGCAGCACGCCGGAGCGTGAACGGAGACTTGGGCTACCACCGATTGAGACGACCAGCATTGCTGCGCTTC  <  NC_002947/291076‑290929                                                                                                                                                                                                                                                                       CTCCAACAGAACACAAGGAAGCGCAGCAATGCTGGTCGTCTCAATCGGTGGTAGCCCAAGTCTCCGTTCACGCTCCGGCGTGCTGCTCGAGCGTTCGCGCCAGTGGCTGCAGGTCTTCGGCGGGAAAGTCACGCACCTGGAACGTCAC                                                                                                                   >  3:36480/1‑148                       GCAGCAATGCTGGTCGTCTCAATCGGTGGTAGCCCAAGTCTCCGTTCACGCTCCGGCGTGCTGCTCGAGCGTTCGCGCCAGTGGCTGCAGGTCTTCGGCGGGAAAGTCACGCACCTGGAACGTCACCACTTCAACGCCGCAATCCTGCA                                                                                            <  4:36480/149‑1                              TGCTGGTCGTCTCAATCGGTGGTAGCCCAAGTCTCCGTTCACGCTCCGGCGTGCTGCTCGAGCGTTCGCGCCAGTGGCTGCAGGTCTTCGGCGGGAAAGTCACGCACCTGGAACGTCACCACTTCAACGCCGCGATCCTGCAGCCACTG                                                                                     <  1:252719/149‑1                                                                                                                 GTCTTCGGCGGGAAAGTCACGCACCTGGAACGTCACCACTTCAACGCCGCGATCCTGCAGCCACTGGCGCGAACGCTCGAGCAGCACGCCGGAGCGTGAACGGAGACTTGGGCTACCACCGATTGAGACGACCAGCATTGCTGCGCTTC  <  4:196388/149‑1                                                                                                                 GTCTTCGGCGGGAAAGTCACGCACCTGGAACGTCACCACTTCAACGCCGCGATCCTGCAGCCACTGGCGCGAACGCTCGAGCAGCACGCCGGAGCGTGAACGGAGACTTGGGCTACCACCGATTGAGACGACCAGCATTGCTGCGCTTC  >  6:35199/1‑149                                                                                                                 GTCTTCGGCGGGAAAGTCACGCACCTGGAACGTCACCACTTCAACCCCGCGATCCTGCAGCCACTGGCGCGAACGCTCGAGCAGCACGCCGGAGCGTGAACGGAGACTTGGGCTACCACCGATTGAGACGACCAGCATTGCTGCGCTTC  >  1:226189/1‑149                                                                                                                                                                                                                                                                       CTCCAACAGAACACAAGGAAGCGCAGCAATGCTGGTCGTCTCAATCGGTGGTAGCCCAAGTCTCCGTTCACGCTCCGGCGTGCTGCTCGAGCGTTCGCGCCAGTGGCTGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/290912‑291024 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggTCTTCGGCGGGAAAGTCACGCACCTGGAACGTCACCACTTCAACGCCGCGATCCTGCAGCCACTGGCGCGAACGCTCGAGCAGCACGCCGGAGCGTGAACGGAGACTTGGGCTACCACCGATTGAGACGACCAGCATTGCTGCGCTTC  <  NC_002947/291076‑290929

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.