| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 409939 = | 50 (0.990) | 3 (0.060) | 3/242 | NT | 5.6% | coding (725/2646 nt) | aceE | pyruvate dehydrogenase E1 component |
| ? | NC_002947 | 410027 = | 54 (1.140) | coding (637/2646 nt) | aceE | pyruvate dehydrogenase E1 component | |||||
GGGCCCGATCCAGGCGATCTACCAGGCACGCTTCATGAAGTACCTGGAAGCCCGTGGCTTCATCCCGGCCGGCAAGCAGAAGGTCTGGTGCTTCATGGGCGACGGTGAGTGCGACGAGCCGGAATCCCTGGGTGCAATCGCCCTGGCCGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/410091‑409939‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggccgGGATGAAGCCACGGGCTTCCAGGTACTTCATGAAGCGTGCCTGGTAGATCGCCTGGATCGGGCCCAGACCCATCGAAACGGTCGGGAACTGCCAGAAGTCAGGCATCAGCCATGGGTGCGGGTACGAAGACAGGCCGTTGCCG > NC_002947/410027‑410169 GGGCCCGATCCAGGCGATCTACCAGGCACGCTTCATGAAGTACCTGGAAGCCCGTGGCTTCATCCCGGCCGGCAAGCAGAAGGTCTGGTGCTTCATGGGCGACGGTGAGTGCGACGAGCCGGAATCCCTGGGTGCAATCGCCCTGGCCG > 2:317144/1‑149 GGCCCGATCCAGGCGATCTACCAGGCACGCTTCATGAAGTACCTGGAAGCCCGTGGCTTCATCCCGGCCGGCAAGCAGAAGGTCTGGTGCTTCATGGGCGACGGTGAGTGCGACGAGCCGGAATCCCTGGGTGCAATCGCCCTGGC < 5:54260/146‑1 CCGATCCAGGCGATCTACCAGGCACGCTTCATGAAGTACCTGGAAGCCCGTGGCTTCATCCCGGCCGGCAAGCAGAAGGTCTGGTGCTTCATGGGCGACGGTGAGTGCGACGAGCCGGAATCCCTGGGTGCAATCGCCCTGGCCGGCCG > 8:92530/1‑149 CCCGGCCGGCAAGCAGAAGGTCTGGTGCTTCATGGGCGACGGTGAGTGCGACGAGCCGGAATCCCTGGGTGCAATCGCCCTGGCCGGCCGGGATGAAGCCACGGGCTTCCAGGTACTTCATGAAGCGTGCCTGGTAGATCGCCTGGATC > 3:104954/1‑149 CCGGCCGGCAAGCAGAAGGTCTGGTGCTTCATGGGCGACGGTGAGTGCGACGAGCCGGAATCCCTGGGTGCAATCGCCCTGGCCGGCCGGGATGAAGCCACGGGCTTCCAGGTACTTCATGAAGCGTGCCTGGTAGATCGCCTGGATCG > 5:208541/1‑149 CGGCCGGCAAGCAGAAGGTCTGGTGCTTCATGGGCGACGGTGAGTGCGACGAGCCGGAATCCCTGGGTGCAATCGCCCTGGCCGGCCGGGATGAAGCCACGGGCTTCCAGGTACTTCATGAAGCGTGCCTGGTAGATCGCCTGGATCGG < 6:208541/149‑1 GCCGGCCGGGATGAAGCCACGGGCTTCCAGGTACTTCATGAAGCGTGCCTGGTAGATCGCCTGGATCGGGCCCAGACCCATCGAAACGGTCGGGAACTGCCAGAAGTCAGGCATCAGCCATGGGTGCGGGTACGAAGACAGGCCGTTGC > 8:115419/1‑149 CGGCCGGGATGAAGCCACGGGCTAACAGGTACTTCATGAAGCGTGCCTGGTAGATCGCCTGGATCGGGCCCAGACCCATCGAAACGGTCGGGAACTGCCAGAAGTCAGGCATCAGCCATGGGTGCGGGTACGAAGACAGGCAGTTGCCG > 1:274210/1‑149 GGGCCCGATCCAGGCGATCTACCAGGCACGCTTCATGAAGTACCTGGAAGCCCGTGGCTTCATCCCGGCCGGCAAGCAGAAGGTCTGGTGCTTCATGGGCGACGGTGAGTGCGACGAGCCGGAATCCCTGGGTGCAATCGCCCTGGCCGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/410091‑409939‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggccgGGATGAAGCCACGGGCTTCCAGGTACTTCATGAAGCGTGCCTGGTAGATCGCCTGGATCGGGCCCAGACCCATCGAAACGGTCGGGAACTGCCAGAAGTCAGGCATCAGCCATGGGTGCGGGTACGAAGACAGGCCGTTGCCG > NC_002947/410027‑410169 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |