| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 514033 | 56 (1.110) | 3 (0.060) | 3/246 | NT | 5.2% | intergenic (+67/+10) | yhfA/PP_0426 | hypothetical protein/membrane protein |
| ? | NC_002947 | = 514053 | 56 (1.170) | coding (1031/1041 nt) | PP_0426 | membrane protein | |||||
GGAAAAGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/513882‑514033‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcccTGCGCAACTGAAACTCGCCCGGGCCGCGGGTGGGAGCGGGTTCACCCGCTTCCACAAGGGCTGCAAAGCGGCCCCGG‑‑AATCTCAGCCTTAACCCAGCTCTACGATTTCATACCCATGGGTAATCTCAACCCCGGCACGCTCGAGCA < NC_002947/514053‑513908 GGAAAAGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTCGCTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGG > 7:206172/1‑149 AAGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCT > 7:154187/1‑149 CGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCTGCGCAACTGAAACTCGCCCGGGCCGCGGGT < 8:154187/149‑1 AGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCTGCGCAACTGAAACTCGCCCGGGCCGCGGG < 7:36920/135‑1 AGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCTGCGCAACTGAAACTCGCCCGGGCCGCGGG > 8:36920/1‑135 CGGCCCTGCGCAACTGAAACTCGCCCGGGCCGCGGGTGGGAGCGGGTTCACCCGCTTCCACAAGGGCTGCAAAGCGGCCCCGG‑‑AATCTCAGCCTTAACCCAGCTCTACGATTTCATACCCATGGGTAATCTCAACCCCGGCACGCTCGA < 6:190231/149‑1 CGGCCCTGCGCAACTGAAACTCGCCCGGGCCGCGGGTGGGAGCGGGTTCACCCGCTTCCACAAGGGCTGCAAAGCGGCCCCGG‑‑AATCTCAGCCTTAACCCAGCTCTACGATTTCATACCCATGGGTAATCTCAACCCCGGCACGCTCGA < 8:31495/149‑1 CGGCCCTGCGCAACTGAAACTCGCCCGGGCCGCGGGTGGGAGCGGGTTCACCCGCTTCCACAAGGGCTGCAAAGCGGCCCCGG‑‑AATCTCAGCCTTAACCCAGCTCTACGATTTCATACCCATGGGTAATCTCAACCCCGGCACGCTCG < 3:249508/148‑1 CCCTGCGCAACTGAAACTCGCCCGGGCCGCGGGTGGGAGCGGGTTCACCCGCTTCCACAAGGGCTGCAAAGCGGCCCCGG‑‑AATCTCAGCCTTAACCCAGCTCTACGATTTCATACCCATGGGTAATCTCAACCCCGGCACGCTCGAGCA > 1:13639/1‑149 CCTGGGCAACTGAAACTCGCCCGGGCCGGGGGTGGGATCGGGTTCACCCGCTTCCACAATGGCTGCAAAGCGGCCCCGGTTAATCTCAGCCTTAACCCAGCTCTACGATTTCATACCCATGGGTAATCTCAACCCCGGCACGCTCGAGC < 1:258072/149‑1 GGAAAAGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTCCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/513882‑514033‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcccTGCGCAACTGAAACTCGCCCGGGCCGCGGGTGGGAGCGGGTTCACCCGCTTCCACAAGGGCTGCAAAGCGGCCCCGG‑‑AATCTCAGCCTTAACCCAGCTCTACGATTTCATACCCATGGGTAATCTCAACCCCGGCACGCTCGAGCA < NC_002947/514053‑513908 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |