New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 514033	56 (1.110)	3 (0.060)	3/246	NT	5.2%	intergenic (+67/+10)	yhfA/PP_0426	hypothetical protein/membrane protein
	?	NC_002947	= 514053	56 (1.170)					coding (1031/1041 nt)	PP_0426	membrane protein

AAGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATGGTCAGCACCA  >  NC_002947/513886‑514179                                                                                                                                                      |                                                                                                                                                    aaGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCt                                                                                                                                                    >  7:154187‑M1/1‑148 (MQ=255)    tATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGc                                                                                                                                                 >  8:40134/1‑149 (MQ=255)      tggCTCGGCTTCGATCATGCGCGAGCGGGCCGGGGTTGATTTCTATGAAGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGa                                                                                                                                               <  1:269309/147‑1 (MQ=255)         cTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGt                                                                                                                                             <  6:182024/148‑1 (MQ=255)          tCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCTATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGAGAGtt                                                                                                                                            >  3:171063/1‑148 (MQ=255)                       tGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAggg                                                                                                                             >  1:13639‑M2/1‑146 (MQ=255)                        gCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATTAACCGGGGCCGCTTTGCAGCCATTGTGGAAGCGGGTGAACCCGATCCCACCCCCGGCCCGGGCGAGTTTCAGTT‑GCCCAgg                                                                                                                              <  1:258072‑M2/149‑3 (MQ=255)                         cTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑gcgc                                                                                                                                 >  1:45740/1‑143 (MQ=255)                         cTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑gcgc                                                                                                                                 <  2:45740/143‑1 (MQ=255)                          tCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAgggccg                                                                                                                          <  6:190231‑M2/149‑7 (MQ=255)                          tCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAgggccg                                                                                                                          <  8:31495‑M2/149‑7 (MQ=255)                           cGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAgggccg                                                                                                                          <  3:249508‑M2/148‑7 (MQ=255)                               cGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCtgcgcaactgaaactcgcccgggccgcgggt                                                                                                                      <  8:154187‑M1/149‑32 (MQ=255)                                 tGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGc                                                                                                                   <  8:276237/149‑1 (MQ=255)                                      gggTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATcc                                                                                                              >  4:33573/1‑149 (MQ=255)                                        gTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTACCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCg                                                                                                             >  3:272355/1‑148 (MQ=255)                                            agaTTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCtgcgcaactgaaactcgcccgggccgcggg                                                                                                                       >  8:36920‑M1/1‑105 (MQ=255)                                            agaTTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCtgcgcaactgaaactcgcccgggccgcggg                                                                                                                       <  7:36920‑M1/135‑31 (MQ=255)                                                  cccATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGc                                                                                                   <  8:206172/148‑1 (MQ=255)                                                   ccATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAATGGTTGCgg                                                                                                 <  5:190231/149‑1 (MQ=255)                                                   ccATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCgg                                                                                                 <  3:33573/149‑1 (MQ=255)                                                   ccATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCg                                                                                                  >  8:62179/1‑148 (MQ=255)                                                     aTGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGaa                                                                                               <  1:154413/149‑1 (MQ=255)                                                         gTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACg                                                                                           >  1:306210/1‑149 (MQ=255)                                                            tGAAATCGTAGAGCTGGGTTAAGGCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGct                                                                                        >  3:258486/1‑149 (MQ=255)                                                            tGAAATCGTAGAGCTGGGTTAAGGCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGc                                                                                         <  3:273845/148‑1 (MQ=255)                                                                         cTGGGTTAAGGCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTgg                                                                           <  4:258486/149‑1 (MQ=255)                                                                            ggTTAAGGCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCt                                                                         >  8:42834/1‑148 (MQ=255)                                                                            ggTTAAGGCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTc                                                                        <  4:146991/149‑1 (MQ=255)                                                                              ttAAGGCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCaa                                                                      <  7:31495/149‑1 (MQ=255)                                                                                  ggCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCTCCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATc                                                                                                               <  3:107734/104‑1 (MQ=255)                                                                                  ggCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCGCCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATc                                                                                                               >  4:107734/1‑104 (MQ=255)                                                                                      gagaTT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTccc                                                              >  2:202953/1‑149 (MQ=255)                                                                                       agaTT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCg                                                             <  4:249508/149‑1 (MQ=255)                                                                                                 gggCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCtttt                                                     <  7:40134/149‑1 (MQ=255)                                                                                                 gggCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCtttt                                                     <  4:1963/149‑1 (MQ=255)                                                                                                 gggCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCtttt                                                     <  4:171063/149‑1 (MQ=255)                                                                                                  ggCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGTCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTg                                                    <  5:58613/149‑1 (MQ=255)                                                                                                      gCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAAcc                                                                    <  4:196297/129‑1 (MQ=255)                                                                                                      gCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAAcc                                                                    >  3:196297/1‑129 (MQ=255)                                                                                                        tttGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAAc                                              >  5:314019/1‑149 (MQ=255)                                                                                                            cAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAgg                                          >  7:147884/1‑149 (MQ=255)                                                                                                                    gtgGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGc                                    >  8:159323/1‑147 (MQ=255)                                                                                                                       gAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGa                                <  4:181849/148‑1 (MQ=255)                                                                                                                          gCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAAc                            <  8:147884/149‑1 (MQ=255)                                                                                                                               tGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAAccccc                        >  5:272181/1‑148 (MQ=255)                                                                                                                               tGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAAccccc                        <  6:272181/148‑1 (MQ=255)                                                                                                                                   cccGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTTGGCGCAGGGCCGGAAGGCCCATCCGCAACCATTGCGGAAGACGGGTTATTAGCGCCTGGATCAACCGCTCCCGCCCCTTTTGGTAAACCAGCCCAAGCCAGTTAACCCCCAGcc                    >  1:210639/1‑149 (MQ=255)                                                                                                                                   cccGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCTGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAg                                 <  6:136689/135‑1 (MQ=255)                                                                                                                                   cccGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCGGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAg                                 >  5:136689/1‑135 (MQ=255)                                                                                                                                    ccGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGccc                   >  4:287183/1‑148 (MQ=255)                                                                                                                                    ccGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGc                     >  8:76319/1‑146 (MQ=255)                                                                                                                                    ccGCTCCAACCCGCGGCCCGGGAGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCAAAGCCAGATAACCCCCAGccc                   >  2:184089/1‑148 (MQ=255)                                                                                                                                      gCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATc                                                                                                               <  4:1756/54‑1 (MQ=255)                                                                                                                                      gCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATc                                                                                                               >  3:1756/1‑54 (MQ=255)                                                                                                                                      gCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGAt                >  6:194134/1‑149 (MQ=255)                                                                                                                                          ccACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCAt             <  1:202953/148‑1 (MQ=255)                                                                                                                                          ccACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCAt             <  2:202437/148‑1 (MQ=255)                                                                                                                                          ccACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATg            <  7:62179/149‑1 (MQ=255)                                                                                                                                          ccACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATg            <  7:76319/149‑1 (MQ=255)                                                                                                                                          ccACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATg            <  3:287183/149‑1 (MQ=255)                                                                                                                                          ccACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATg            <  7:42834/149‑1 (MQ=255)                                                                                                                                            aCCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAgggccgcgggtgggagcgggttcacccgcttccacaagggctgcaaagcggccccggaatctcagccttaacccagctctacgatttcatacccatgggtaatctcaaccccggcacg          <  8:154187‑M2/149‑119 (MQ=255)                                                                                                                                             cccGCGGCCCGGGCGAGTTTCAGTT‑GCGCAgggccgcgggtgggagcgggttcacccgcttccacaagggctgcaaagcggccccggaatctcagccttaacccagctctacgatttcatacccatgggtaatct                       <  7:36920‑M2/135‑106 (MQ=255)                                                                                                                                             cccGCGGCCCGGGCGAGTTTCAGTT‑GCGCAgggccgcgggtgggagcgggttcacccgcttccacaagggctgcaaagcggccccggaatctcagccttaacccagctctacgatttcatacccatgggtaatct                       >  8:36920‑M2/1‑30 (MQ=255)                                                                                                                                             cccGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATGGTc         <  2:306210/149‑1 (MQ=255)                                                                                                                                              ccGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATGGt          >  1:280250/1‑147 (MQ=255)                                                                                                                                               cgcgGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATGGTCAg       <  2:258072/149‑1 (MQ=255)                                                                                                                                                gcgGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATGGTCAGc      <  4:272355/149‑1 (MQ=255)                                                                                                                                                 cgGCCCtgcgcaactgaaactcgcccgggccgcgggtgggagcgggttcacccgcttccacaagggctgcaaagcggccccggaatctcagccttaacccagctctacgatttcatacccatgggtaatctcaaccccggcacgctcga      <  6:190231‑M1/149‑144 (MQ=255)                                                                                                                                                 cgGCCCtgcgcaactgaaactcgcccgggccgcgggtgggagcgggttcacccgcttccacaagggctgcaaagcggccccggaatctcagccttaacccagctctacgatttcatacccatgggtaatctcaaccccggcacgctcga      <  8:31495‑M1/149‑144 (MQ=255)                                                                                                                                                 cgGCCCtgcgcaactgaaactcgcccgggccgcgggtgggagcgggttcacccgcttccacaagggctgcaaagcggccccggaatctcagccttaacccagctctacgatttcatacccatgggtaatctcaaccccggcacgctcg       <  3:249508‑M1/148‑143 (MQ=255)                                                                                                                                                    ccctgcgcaactgaaactcgcccgggccgcgggtgggagcgggttcacccgcttccacaagggctgcaaagcggccccggaatctcagccttaacccagctctacgatttcatacccatgggtaatctcaaccccggcacgctcgagca   >  1:13639‑M1/1‑3 (MQ=255)                                                                                                                                                     cctgggcaactgaaactcgcccgggccgggggtgggatcgggttcacccgcttccacaatggctgcaaagcggccccggttaatctcagccttaacccagctctacgatttcatacccatgggtaatctcaaccccggcacgctcgagc  <  1:258072‑M1/149‑148 (MQ=255)                                                                                                                                                      |                                                                                                                                                    AAGTATTGCTCGGCTTCGATCATGCTCGAGCGTGCCGGGGTTGAGATTACCCATGGGTATGAAATCGTAGAGCTGGGTTAAGGCTGAGATT‑‑CCGGGGCCGCTTTGCAGCCCTTGTGGAAGCGGGTGAACCCGCTCCCACCCGCGGCCCGGGCGAGTTTCAGTT‑GCGCAGGGCCGGAAGGGCCATCCGCAACCATTGCGGAAGACGGCTTCTTAGCGCCTGGCTCAACCGCTCCCGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATGGTCAGCACCA  >  NC_002947/513886‑514179

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.