| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 643149 | 41 (0.810) | 4 (0.080) | 4/250 | NT | 8.3% | coding (857/1023 nt) | acoB | acetoin:2,6‑dichlorophenolindophenol oxidoreductase subunit beta |
| ? | NC_002947 | = 643188 | 49 (1.000) | coding (818/1023 nt) | acoB | acetoin:2,6‑dichlorophenolindophenol oxidoreductase subunit beta | |||||
CGGCTTCGATCACCTTGCGCACGGCGGCTTCGATCTTCGCCGCGTCAGGGATGTACAGGTCTTCCAGGGCGTCGGAGAACGGCACCGGGGTATGCGGCGCGGTGACCATTTCGATCGGGCCCTTGAGTGCGCCAAAAGCCTTCTGTGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/643000‑643149‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaACCCGCGCTGCTCGATGGCCACCGACATCAGCGCGCTGGTGGCACAGAAGGCTTTTGGCGCACTCAAGGGCCCGATCGAAATGGTCACCGCGCCGCATACCCCGGTGCCGTTCTCCGACGCCCTGGAAGACCTGTACATCCCTGA < NC_002947/643188‑643044 CGGCTTCGATCACCTTGCGCACGGCGGCTTCGATCTTCGCCGCGTCAGGGATGTACAGGTCTTCCAGGGCGTCGGAGAACGGCACCGGGGTATGCGGCGCGGTGACCATTTCGATCGGGCCCTTGAGTGCGCCAAAAGCCTTCTGTGC < 2:182824/148‑1 GGCTTCGATCACCTTGCGCACGGCGGCTTCGATCTTCGCCGCGTCAGGGATGTACAGGTCTTCCAGGGCGTCGGAGAACGGCACCGGGGTATGCGGCGCGGTGACCATTTCGATCGGGCCCTTGAGTGCGCCAAAAGCCTTCTGTGCCA > 1:222075/1‑149 GGCTTCGATCACCTTGCGCACGGCGGCTTCGATCTTCGCCGCGTCAGGGATGTACAGGTCTTCCAGGGCGTCGGAGAACGGCACCGGGGTATGCGGCGCGGTGACCATTTCGATCGGGCCCTTGAGTGCGCCAAAAGCCTTCTGTGCCA > 7:147782/1‑149 GATCACCTTGCGCACGGCGGCTTCGATCATCGCCGCGTCAGGGATGTACAGGTCTTCCAGGGCGTCGGAGAACGGCACCGGGGTATGCGGCGCGGTGACCATTTCGATCGGGCCCTTGAGTGCGCCAAAAGCCTTCTGTGCCAACCCGC > 2:9432/1‑149 AGGGATGTACAGGTCTTCCAGGGCGTCGGAGAACGGCACCGGGGTATGCGGCGCGGTGACCATTTCGATCGGGCCCTTGAGTGCGCCAAAAGCCTTCTGTGCCAACCCGCGCTGCTCGATGGCCACCGACATCAGCGCGCTGGTGGCAC < 1:9432/149‑1 CTTGCAGGGCGTGGGAGTACGGCACCGGGGTATGCGTCGCGGTGACCATTTCGATCGGGCCCTTGAGTGCGCCAAAAGCGTTCTGTGCCAACCCGCGCTGCTCGATGGACACCGACATCAGCGCGCTGG < 8:258692/129‑1 CTTCCAGGGCGTCGGAGAACGGCACCGGGGTATGCGGCGCGGTGACCATTTCGATCGGGCCCTTGAGTGCGCCAAAAGCCTTCTGTGCCAACCCGCGCTGCTCGATGGCCACCGACATCAGCGCGCTGG > 7:258692/1‑129 GCCAACCCGCGCTGCTCGATGGCCACCGACATCAGCGCGCTGGTGGCACAGAAGGCTTTTGGCGCACTCAAGGGCCCGATCGAAATGGTCACCGAGCCGCATACCCCGGTGCCGTTCTCCGACGCCCTGGAAGACCTGTACATCCCTGA > 7:111250/1‑149 CGGCTTCGATCACCTTGCGCACGGCGGCTTCGATCTTCGCCGCGTCAGGGATGTACAGGTCTTCCAGGGCGTCGGAGAACGGCACCGGGGTATGCGGCGCGGTGACCATTTCGATCGGGCCCTTGAGTGCGCCAAAAGCCTTCTGTGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/643000‑643149‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaACCCGCGCTGCTCGATGGCCACCGACATCAGCGCGCTGGTGGCACAGAAGGCTTTTGGCGCACTCAAGGGCCCGATCGAAATGGTCACCGCGCCGCATACCCCGGTGCCGTTCTCCGACGCCCTGGAAGACCTGTACATCCCTGA < NC_002947/643188‑643044 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |