New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 731541	51 (1.010)	3 (0.060)	3/246	NT	5.8%	coding (1081/2565 nt)	clpB	chaperone protein ClpB
	?	NC_002947	= 731561	49 (1.020)					coding (1101/2565 nt)	clpB	chaperone protein ClpB

CGTAGGTGCCACCACGCTGAACGAGTACCGCCAGTTCATCGAAAAGGACGCCGCCCTGGAGCGCCGTTTCCAGAAGGTGCTGGTCGAGGAGCCGAGCGAGGAAGACACCATCGCCATCCTGCGTGGCCTGAAAGAGCGCTATGAAGTGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/731390‑731541 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcaccGTCGGTGATGGCCACCTTGTGGTGCACTTCATAGCGCTCTTTCAGGCCACGCAGGATGGCGATGGTGTCTTCCTCGCTCGGCTCCTCGACCAGCACCTTCTGGAAACGGCGCTCCAGGGCGGCGTCCTTTTCGATGAACTGGCGGTAC  <  NC_002947/731561‑731414                                                                                                                                                                                                                                                                                                              CGTAGGTGCCACCACGCTGAACGAGTACCGCCAGTTCATCGAAAAGGACGCCGCCCTGGAGCGCCGTTTCCAGAAGGTGCTGGTCGAGGAGCCGAGCGAGGAAGACACCATCGCCATCCTGCGTGGCCTGAAAGAGCGCTATGAAGTG                                                                                                                                                          >  6:183284/1‑148   TAGGTGCCACCACGCTGAACGAGTACCGCCAGTTCATCGAAAAGGACGCCGCCCTGGAGCGCCGTTTCCAGAAGGTGCTGGTCGAGGAGCCGAGCGAGGAAGACACCATCGCCATCCTGCGTGGCCTGAAAGAGCGCTATGAAGTGCAC                                                                                                                                                       <  6:58065/149‑1                                   TTCATCGAAAAGGACGCCGCCCTGGAGCGCCGTTTCCAGAAGGTGCTGGTCGAGGAGCCGAGCGAGGAAGACACCATCGCCATCCTGCGTGGCCTGAAAGAGCGCTATGAAGTGCACCGTCGGTGATGGCCACCTTGTGGTGCACTTCA                                                                                                                       <  1:18212/149‑1                                      ATCGAAAAGGACGCCGCCCTGGAGCGCCGTTTCCAGAAGGTGCTGGTCGAGGAGCCGAGCGAGGAAGACACCATCGCCATCCTGCGTGGCCTGAAAGAGCGCTATGAAGTGCACCGTCGGTGATGGCCACCTTGTGGTGCACTTCATA                                                                                                                     <  5:72398/148‑1                                                ACGCCGCCCTGGAGCGCCGTTTCCAGAAGGTGCTGGTCGAGGAGCCGAGCGAGGAAGACACCATCGCCATCCTGCGTGGCCTGAAAGAGCGCTATGAAGTGCACCGTTGGTGATGGCCACCTTGTGGTGCACTTCATAGCGCTCTTTCA                                                                                                          <  6:298258/149‑1                                                                                                                                                     CACCGTCGGTGATGGCCACCTTGTGGTGCACTTCATAGCGCTCTTTCAGGCCACGCAGGATGGCGATGGTGTCTTCCTCGCTCGGCTCCTCGACCAGCACCTTCTGG                                               <  3:301097/107‑1                                                                                                                                                     CACCGTCGGTGATGGCCACCTTGTGGTGCACTTCATAGCGCTCTTTCAGGCCACGCAGGATGGCGATGGTGTCTTCCTCGCTCGGCTCCTCGACCAGCACCTTCTGG                                               >  4:301097/1‑107                                                                                                                                                        CGTCGGTGATGGCCACCTTGTGGTGCACTTCATAGCGCTCTTTCAGGCCACGCAGGATGGCGATGGTGTCTTCCTCGCTCGGCTCCTCGACCAGCACCTTCTGGAAACGGCGCTCCAGGGCGGCGTCCTTTTCGATGAACTGGCGGTAC  >  3:277828/1‑149                                                                                                                                                                                                                                                                                                              CGTAGGTGCCACCACGCTGAACGAGTACCGCCAGTTCATCGAAAAGGACGCCGCCCTGGAGCGCCGTTTCCAGAAGGTGCTGGTCGAGGAGCCGAGCGAGGAAGACACCATCGCCATCCTGCGTGGCCTGAAAGAGCGCTATGAAGTGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/731390‑731541 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcaccGTCGGTGATGGCCACCTTGTGGTGCACTTCATAGCGCTCTTTCAGGCCACGCAGGATGGCGATGGTGTCTTCCTCGCTCGGCTCCTCGACCAGCACCTTCTGGAAACGGCGCTCCAGGGCGGCGTCCTTTTCGATGAACTGGCGGTAC  <  NC_002947/731561‑731414

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.