| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 840424 | 52 (1.030) | 4 (0.080) | 4/248 | NT | 7.5% | coding (278/861 nt) | ispE | 4‑diphosphocytidyl‑2C‑methyl‑D‑erythritol kinase |
| ? | NC_002947 | = 840460 | 49 (1.010) | coding (242/861 nt) | ispE | 4‑diphosphocytidyl‑2C‑methyl‑D‑erythritol kinase | |||||
CCGCGTACGAACACCGGCACATCGGCGCCCAGGCTCAGGCCCAGTGCGGCCAGGCGGTCTTCGTCCCAGTCCAGTTGCCACAGGTGGGCCAGGGCCAGCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/840274‑840424‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcaCCACGCTTGGCGCCGACATCTGGCTGACCAAGGTACTGCCCATGGGCGGAGGTATCGGCGGTGGCAGCTCAGACGCCGCGACCACCCTGCTGGCCCTGGCCCACCTGTGGCAACTGGACTGGGACGAAGACCGCCTGGCCGCACTGG < NC_002947/840460‑840314 CCGCGTACGAACACCGGCACATCGGCGCCCAGGCTCAGGCCCAGTGCGGCCAGGCGGTCTTCGTCCCAGTCCAGTTGCCACAGGTGGGCCAGGGCCAGCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGG > 4:304313/1‑149CCGCGTACGAACACCGGCACAGCGGCGCCCAGGCTCAGGCCCAGTGCGGCCAGGCGGTCTTCGTCCCAGTCCAGTTGCCACAGGTGGGCCAGGGCCAGCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGG < 4:300245/149‑1 CGCGTACGAACACCGGCACATCGGCGCCCAGGCTCAGGCCCAGTGCGGCCAGGCGGTCTTCGTCCCAGTCCAGTTGCCACAGGTGGGCCAGGGCCAGCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGC < 4:150962/149‑1 GAACACCGGCACATCGGCGCCCAGGCTCAGGCCCAGTGCGGCCAGGCGGTCTTCGTCCCAGTCCAGTTGCCACAGGTGGGCCAGGGCCAGCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCA > 3:303997/1‑143 GAACACCGGCACATCGGCGCCCAGGCTCAGGCCCAGTGCGGCCAGGCGGTCTTCGTCCCAGTCCAGTTGCCACAGGTGGGCCAGGGCCAGCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCA < 4:303997/143‑1 CGGCACATCGGCGCCCAGGCTCAGGCCCAGTGCGGCCAGGCGGTCTTCGTCCCAGTCCAGTTGCCACAGCTGGGCCAGGGCCAGCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCACCACGCTTGGCG > 2:122531/1‑149 CGGCCAGGCGGTCTTCGTCCCAGTCCAGTTGCCACAGGTGGGCCAGGGCCAGCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCACCACGCTTGGCGCCGACATCTGGCTGACCAAGGTACTGCCCAT < 1:122531/148‑1 GCCACAGGTGGGCCAGGGCCAGCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCACCACGCTTGGCGCCGACATCTGGCTGACCAAGGTACTGCCCATGG < 7:294868/120‑1 GCCACAGGTGGGCCAGGGCCAGCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCACCACGCTTGGCGCCGACATCTGGCTGACCAAGGTACTGCCCATGG > 8:294868/1‑120 GGGCACCACGCTTGGCGCCGACATCTGGCTGACCAAGGTACTGCCCATGGGCGGAGGTATCGGCGGTGGCAGCTCAGACGCCGCGACCACCCTGCTGGCCCTGGCCCACCTGTGGCAACTGGACTGGGACGAAGACCGCCTGGCCGCAC < 7:144342/149‑1 GCACCACGCTTGGCGCCGACATCTGGCTGACCAAGGTACTGCCCATGGGCGGAGGTATCGGCGGTGGCAGCTCAGACGCCGCGACCACCCTGCTGGCCCTGGCCCACCTGTGGCAACTGGACTGGGACGAAGACCGCCTGGCCGCACTG > 6:117030/1‑149 CACCACGCTTGGCGCCGACATCTGGCTGACCAAGGTACTGCCCATGGGCGGAGGTATCGGCGGTGGCAGCTCAGACGCCGCGACCACCCTGCTGGCCCTGGCCCACCTGTGGCAACTGGACTGGGACGAAGACCGCCTGGCCGCACTGG > 7:283209/1‑149 CCGCGTACGAACACCGGCACATCGGCGCCCAGGCTCAGGCCCAGTGCGGCCAGGCGGTCTTCGTCCCAGTCCAGTTGCCACAGGTGGGCCAGGGCCAGCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/840274‑840424‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcaCCACGCTTGGCGCCGACATCTGGCTGACCAAGGTACTGCCCATGGGCGGAGGTATCGGCGGTGGCAGCTCAGACGCCGCGACCACCCTGCTGGCCCTGGCCCACCTGTGGCAACTGGACTGGGACGAAGACCGCCTGGCCGCACTGG < NC_002947/840460‑840314 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |