New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 840424	52 (1.030)	4 (0.080)	4/248	NT	7.5%	coding (278/861 nt)	ispE	4‑diphosphocytidyl‑2C‑methyl‑D‑erythritol kinase
	?	NC_002947	= 840460	49 (1.010)					coding (242/861 nt)	ispE	4‑diphosphocytidyl‑2C‑methyl‑D‑erythritol kinase

GCCCAGTGCGGCCAGGCGGTCTTCGTCCCAGTCCAGTTGCCACAGGTGGGCCAGGGCCAGCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTGTCGTGGGGGACGGCCTCGATCTCGGTGTGCAAGCGGATCACGCCATCGTCACGCAGGGCAAAACTCAGTTCGTCGCCATGGTCTAGAAACTGA  >  NC_002947/840312‑840603                                                                                                                                                     |                                                                                                                                                gCCCAGTGCGGCCAGGCGGTCTTCGTCCCAGTCCAGTTGCCACAGGTGGGCCAGGGCCAGCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCgtgg                                                                                                                                                 >  4:145713/1‑149 (MQ=255) gCCCAGTGCGGCCAGGCGGTCTTCGTCCCAGTCCAGTTGCCACAGGTGGGCCAGGGCCAGCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCgtgg                                                                                                                                                 >  4:215819/1‑149 (MQ=255) gCCCAGTGCGGCCAGGCGGTCTTCGTCCCAGTCCAGTTGCCACAGGTGGGCCAGGGCCAGCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCgtgg                                                                                                                                                 >  6:309832/1‑149 (MQ=255)   ccAGTGCGGCCAGGCGGTCTTCGTCCCAGTCCAGTTGCCACAGGTGGGCCAGGGCCAGCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGtg                                                                                                                                               >  7:283209‑M2/1‑147 (MQ=255)    cAGTGCGGCCAGGCGGTCTTCGTCCCAGTCCAGTTGCCACAGGTGGGCCAGGGCCAGCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGtgc                                                                                                                                              >  6:117030‑M2/1‑146 (MQ=255)      gTGCGGCCAGGCGGTCTTCGTCCCAGTCCAGTTGCCACAGGTGGGCCAGGGCCAGCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGtgccc                                                                                                                                            <  7:144342‑M2/149‑6 (MQ=255)         cGGCCAGGCGGTCTTCGTCCCAGTCCAGTTGCCACAGGTGGGCCAGGGCCAGCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGa                                                                                                                                          <  3:145713/148‑1 (MQ=255)          ggCCAGGCGGTCTTCGTCCCAGTCCAGTTGCCACAGGTGGGCCAGGGCCAGCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGAtt                                                                                                                                        <  6:292126/149‑1 (MQ=255)                gCGGTCTTCGTCCCAGTCCAGTTGCCACAGGTGGGCCAGGGCCAGCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCtt                                                                                                                                  >  7:157616/1‑149 (MQ=255)                 cGGTCTTCGTCCCAGTCCAGTTGCCACAGGTGGGCCAGGGCCAGCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTg                                                                                                                                 <  8:157616/149‑1 (MQ=255)                   gTCTTCGTCCCAGTCCAGTTGCCACAGGTGGGCCAGGGCCAGCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTgca                                                                                                                               <  3:304313/149‑1 (MQ=255)                        cGTCCCAGTCCAGTTGCCACAGGTGGGCCAGGGCCAGCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCAt                                                                                                                           <  2:269041/148‑1 (MQ=255)                           cccAGTCCAGTTGCCACAGGTGGGCCAGGGCCAGCAGGGTGGTCGCGGCGTCTGAGCTGCCACAGCCGATACCTCCGCACATGTGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATgcgc                                                                                                                       >  7:209845/1‑149 (MQ=255)                           cccAGTCCAGTTGCCACAGGTGGGCCAGGGCCAGCAGGGTGGTCGCGGCGGCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATgcgc                                                                                                                       <  8:144342/149‑1 (MQ=255)                                        ccACAGGTGGGCCAGGGCCAGCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGa                                                                                                          <  1:122834/149‑1 (MQ=255)                                        ccACAGGTGGGCCAGGGCCAGCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGAGACCTCCGCCCATGGGCAGGACCTTGGTCAGCCAGCTGTCGGCGCCCAGCGTGGTGCCCGATTGTGCTGGCAGCATGCGCGCGGCCCGTACGa                                                                                                          >  3:50886/1‑149 (MQ=255)                                              gTGGGCCAGGGCCAGCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGt                                                                                                    >  4:214980/1‑149 (MQ=255)                                              gTGGGCCAGGGCCAGCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGAGTCCCGTACGATAAGGt                                                                                                    >  6:225004/1‑149 (MQ=255)                                                   ccagggccagCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTg                                                                                               >  8:37449/1‑149 (MQ=255)                                                   ccagggccagCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGAttttaa                                                                                               >  1:275298/1‑145 (MQ=255)                                                    cagggccagCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGAtt                                                                                                                                        <  4:11638/107‑1 (MQ=255)                                                    cagggccagCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGAtt                                                                                                                                        >  3:11638/1‑107 (MQ=255)                                                     agggccagCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTGTc                                                                                             <  7:37449/149‑1 (MQ=255)                                                       ggccagCAGGGTGGTCGCGGCGTCTGAGCTGCCACCACCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTGTCGt                                                                                           <  4:241703/149‑1 (MQ=255)                                                         ccagCAGGGTGGTCGCGGCGTCTGAGCTTCAACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGACAGATGTCGTCGCCAAGAGTGGTTGCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTGTCGTgg                                                                                         <  5:225004/149‑1 (MQ=255)                                                         ccagCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTGTCGTgg                                                                                         <  3:214980/149‑1 (MQ=255)                                                          cagcagGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTGTCGTggg                                                                                        <  2:208757/149‑1 (MQ=255)                                                          cagcagGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTGTCGTggg                                                                                        >  6:284349/1‑149 (MQ=255)                                                            gcagGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTGTCGTgggg                                                                                       >  3:143275/1‑148 (MQ=255)                                                             cagGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTGTAGTggg                                                                                        <  1:178611/146‑1 (MQ=255)                                                             cagGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTGTAGTggg                                                                                        >  2:178611/1‑146 (MQ=255)                                                                     tCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCg                                                                                                               >  1:256448/1‑115 (MQ=255)                                                                     tCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCg                                                                                                               <  2:256448/115‑1 (MQ=255)                                                                     tCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTGTCGTGGGGGACGGCCTCg                                                                             <  3:215819/149‑1 (MQ=255)                                                                       gcggcgTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTGTCGTGGGGGACGGCCTCGa                                                                            <  5:309832/148‑1 (MQ=255)                                                                                     gCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAg                                                                                                      <  6:258307/108‑1 (MQ=255)                                                                                     gCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAg                                                                                                      >  5:258307/1‑108 (MQ=255)                                                                                        aCCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCt                                                                                                >  5:260294/1‑111 (MQ=255)                                                                                        aCCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCt                                                                                                <  6:260294/111‑1 (MQ=255)                                                                                              gATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTGTCGTGGGGGACGGCCTCGATCTCGGTGTGCAAGCGGATCACGc                                                    >  1:132290/1‑149 (MQ=255)                                                                                                  ccTGCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGTTTGTGCTTGCATCATGCGCTCGGCCCGTACGATCAGGTTGCTGTCGTGGGGGACGGCCTCGATCTCGGTGTGCAAGCGGATCACGCCATc                                                <  3:175771/149‑1 (MQ=255)                                                                                                   cTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTGTCGTGGGGGACGGCCTCGATCTCGGTGTGCAAGCGGATCACGCCATCg                                               >  6:152046/1‑149 (MQ=255)                                                                                                   cTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTGTCGTGGGGGACGGCCTCGATCTCGGTGTGCAAGCGGATCACGCCATCg                                               >  7:161082/1‑149 (MQ=255)                                                                                                      cGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGTTGTCGTGGGGGACGGCCTCGATCTCGGTGTGCAAGCGGATCACGCCATCGt                                              <  3:176017/147‑1 (MQ=255)                                                                                                        cccATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTGTCGTGGGGGACGGCCTCGATCTCGGTGTGCAAGCGGATCACGCCATCGTCACg                                          >  7:194254/1‑149 (MQ=255)                                                                                                         ccATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGtgcccatgggcggaggtatcggcggtggcagctcagacgccgcgaccaccctgctggccctggcccacctgtggc                                                                      >  8:294868‑M2/1‑45 (MQ=255)                                                                                                         ccATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGtgcccatgggcggaggtatcggcggtggcagctcagacgccgcgaccaccctgctggccctggcccacctgtggc                                                                      <  7:294868‑M2/120‑76 (MQ=255)                                                                                                         ccATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTGTCGTGGGGGACGGCCTCGATCTCGGTGTGCAAGCGGATCACGCCATCGTCACg                                          >  4:90411/1‑148 (MQ=255)                                                                                                           aTGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGtgcccatgggcggaggtatcggcggtggcagctcagacgccgcgaccaccctgctggccctggcccacctgtggcaactggactgggacgaagaccgcctggccg                                        <  1:122531‑M2/148‑106 (MQ=255)                                                                                                                  gTACCTTGGTCAGCCAGATGTCGGCGCCACGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTGTCGTGGGGGACGGCCTCGATCTCGGTGTGCAAGCGGATCACGCCATCGTCACGCAGGGCaaaa                                <  8:209845/149‑1 (MQ=255)                                                                                                                              gCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTGTCGTGGGGGACAGCCTCGATCTCGGTGTGCAAGCGGATCACGCCATCGTCACGCAGGGCAAAACTCAGTtcgtcg                    >  7:288044/1‑149 (MQ=255)                                                                                                                                 aGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTGTCGTGGGGGACGGCCTCGATCTCGGTGTGCAAGCGGATCACGCCATCGTCACGCAGGGCAAAACTCAGTTCGTCGCCa                 >  1:82878/1‑149 (MQ=255)                                                                                                                                   aTGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTGTCGTGGGGGACGGCCTCGATCTCGGTGTGCAAGCGGATCACGCCATCGTCACGCAGGGCAAAACTCAGTTCGTCGCCATg               <  2:82878/149‑1 (MQ=255)                                                                                                                                     gTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTGTCGTgggg                                                                                       <  7:139458/75‑1 (MQ=255)                                                                                                                                     gTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTGTCGTgggg                                                                                       >  8:139458/1‑75 (MQ=255)                                                                                                                                      tCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTGTCGTGGGGGACGGCCTCGATCTCGGTGTGCAAGCGGATCACGCCATCGTCACGCAGGGCAAAACTCAGTTCGTCGCCATGGTc            >  5:295604/1‑149 (MQ=255)                                                                                                                                        ggCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTGTCGTGGGGGACGGCCTCGATCTCGGTGTGCAAGCGGATCACGCCATCGTCACGCAGGGCAAAACTCAGTTCGTCGCCATGGTCTa          <  3:90411/149‑1 (MQ=255)                                                                                                                                         gcgcCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTGTCGTGGGGGACGGCCTCGATCTCGGTGTGCAAGCGGATCACGCCATCGTCACGCAGGGCAAAACTCAGTTCGTCGCCATGGTc            >  6:118729/1‑146 (MQ=255)                                                                                                                                         gcgcCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTGTCGTGGGGGACGGCCTCGATCTCGGTGTGCAAGCGGATCACGCCATCGTCACGCAGGGCAAAACTCAGTTAGTCGCCATGGTc            >  5:113883/1‑146 (MQ=255)                                                                                                                                          cgcCAAGCGTGGtgcccatgggcggaggtatcggcggtggcagctcagacgccgcgaccaccctgctggccctggcccagctgtggcaactggactgggacgaagaccgcctggccgcactgggcctgagcctgggcgccgatgtgccg        >  2:122531‑M2/1‑12 (MQ=255)                                                                                                                                           gcCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTGTCGTGGGGGACGGCCTCGATCTCGGTGTGCAAGCGGATCACGCCATCGTCACGCAGGGCAAAACTCAGTTCGTCGCCATGGTCTAGa        >  4:56974/1‑148 (MQ=255)                                                                                                                                             cAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTGTCGTGGGGGACGGCCTCGATCTCGGTGTGCAAGCGGATCACGCCATCGTCACGCAGGGCAAAACTCAGTTCGTCGCCATGGTCTAGAAAc     <  8:194254/149‑1 (MQ=255)                                                                                                                                                gCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTGTCGTGGGGGACGGCCTCGATCTCGGTGTGCAAGCGGATCACGCCATCGTCACGCAGGGCAAAACTCAGTTCGTCGCCATGGTCTAGAAACTGa  <  5:152046/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                GCCCAGTGCGGCCAGGCGGTCTTCGTCCCAGTCCAGTTGCCACAGGTGGGCCAGGGCCAGCAGGGTGGTCGCGGCGTCTGAGCTGCCACCGCCGATACCTCCGCCCATGGGCAGTACCTTGGTCAGCCAGATGTCGGCGCCAAGCGTGGTGCCCGATTGTGCTTGCAGCATGCGCGCGGCCCGTACGATCAGGTTGCTGTCGTGGGGGACGGCCTCGATCTCGGTGTGCAAGCGGATCACGCCATCGTCACGCAGGGCAAAACTCAGTTCGTCGCCATGGTCTAGAAACTGA  >  NC_002947/840312‑840603

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.